Gene list
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COG category: Energy production and conversion
Organism: Phage Gifsy-1
Number of genes found: 289
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Phage Gifsy-1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SC2524 | putative polyferredoxin | chromosome | CDS | 2681302 | 864 | - | 0.59838 |
NA | SC1559 | putative monooxygenase | chromosome | CDS | 1652136 | 468 | - | 0.547009 |
NA | SC3576 | biotin sulfoxide reductase | chromosome | CDS | 3781101 | 2334 | - | 0.577549 |
NA | SC1265 | putative inner membrane protein | chromosome | CDS | 1369069 | 528 | - | 0.467803 |
NA | SC2630 | putative DNA-binding protein | chromosome | CDS | 2783835 | 348 | - | 0.534483 |
NA | SC2072 | Hydrogen sulfide production: membrane anchoring protein | chromosome | CDS | 2158613 | 765 | - | 0.518954 |
NA | SC1105 | putative inner membrane protein | chromosome | CDS | 1225485 | 573 | - | 0.525305 |
NA | SC1066 | Suppression of copper sensitivity: lipoprotein modification in lgt mutants of E coli | chromosome | CDS | 1182476 | 507 | + | 0.619329 |
NA | SC2997 | putative monooxygenase | chromosome | CDS | 3175308 | 1203 | - | 0.573566 |
NA | SC1273 | putative cytoplasmic protein | chromosome | CDS | 1376941 | 327 | + | 0.522936 |
NA | SC4345 | replication protein | chromosome | CDS | 4648993 | 372 | - | 0.325269 |
NA | SC2633 | Gifsy-1 prophage cI protein | chromosome | CDS | 2786013 | 432 | - | 0.525463 |
NA | SC2750 | putative glycoporin | chromosome | CDS | 2919238 | 1371 | - | 0.472648 |
aceA | SC4063 | isocitrate lyase | chromosome | CDS | 4337021 | 1305 | + | 0.562452 |
aceB | SC4062 | malate synthase A | chromosome | CDS | 4335388 | 1602 | + | 0.519975 |
aceE | SC0151 | pyruvate dehydrogenase, decarboxylase component | chromosome | CDS | 172298 | 2664 | + | 0.543168 |
aceF | SC0152 | pyruvate dehydrogenase, dihydrolipoyltransacetylase component | chromosome | CDS | 174976 | 1584 | + | 0.55745 |
ach | SC3058 | putative acetyl-CoA hydrolase | chromosome | CDS | 3236312 | 1326 | - | 0.451735 |
ackA | SC2338 | acetate kinase A (propionate kinase 2) | chromosome | CDS | 2462350 | 1203 | + | 0.52286 |
acnA | SC1707 | aconitate hydratase 1 | chromosome | CDS | 1817886 | 2676 | - | 0.556427 |
acnB | SC0157 | aconitate hydratase 2 | chromosome | CDS | 181608 | 2598 | + | 0.578907 |
adh2 | SC3934 | putative iron-containing alcohol dehydrogenase | chromosome | CDS | 4186849 | 1149 | - | 0.574413 |
adh3 | SC1622 | alcohol dehydrogenase class III | chromosome | CDS | 1730830 | 1119 | - | 0.531725 |
adhE | SC1744 | iron-dependent alcohol dehydrogenase of the multifunctional alcohol dehydrogenase AdhE | chromosome | CDS | 1856254 | 2679 | + | 0.531168 |
akr | SC0135 | putative aldo/keto reductase | chromosome | CDS | 156308 | 990 | - | 0.536364 |
aldB | SC3604 | aldehyde dehydrogenase B (lactaldehyde dehydrogenase) | chromosome | CDS | 3810559 | 1539 | - | 0.549058 |
allD | SC0567 | ureidoglycolate dehydrogenase | chromosome | CDS | 634345 | 1050 | - | 0.501905 |
asrA | SC2542 | anaerobic sulfide reductase | chromosome | CDS | 2707050 | 1044 | + | 0.525862 |
asrB | SC2543 | anaerobic sulfide reductase | chromosome | CDS | 2708097 | 819 | + | 0.555556 |
asrC | SC2544 | anaerobic sulfide reductase | chromosome | CDS | 2708926 | 1014 | + | 0.554241 |
atpA | SC3779 | membrane-bound ATP synthase, F1 sector, alpha-subunit | chromosome | CDS | 4011490 | 1542 | - | 0.554475 |
atpB | SC3783 | membrane-bound ATP synthase, F0 sector, subunit a, important for FO assembly | chromosome | CDS | 4014408 | 816 | - | 0.517157 |
atpC | SC3776 | membrane-bound ATP synthase, F1 sector, epsilon-subunit | chromosome | CDS | 4008727 | 420 | - | 0.557143 |
atpD | SC3777 | membrane-bound ATP synthase, F1 sector, beta-subunit | chromosome | CDS | 4009167 | 1383 | - | 0.552422 |
atpF | SC3781 | membrane-bound ATP synthase, F0 sector, subunit b | chromosome | CDS | 4013592 | 471 | - | 0.52017 |
atpG | SC3778 | membrane-bound ATP synthase, F1 sector, gamma-subunit | chromosome | CDS | 4010576 | 864 | - | 0.530093 |
atpH | SC3780 | membrane-bound ATP synthase, F1 sector, delta-subunit | chromosome | CDS | 4013044 | 534 | - | 0.526217 |
atpI | SC3784 | membrane-bound ATP synthase subunit, F1-F0-type proton-ATPase | chromosome | CDS | 4015232 | 384 | - | 0.513021 |
atpL | SC3782 | ATP synthase C chain | chromosome | CDS | 4014122 | 240 | - | 0.545833 |
caiB | SC0066 | l-carnitine dehydratase | chromosome | CDS | 78261 | 1218 | - | 0.532841 |
ccmG | SC2253 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | chromosome | CDS | 2362717 | 558 | - | 0.61828 |
ccmG | SC3735 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | chromosome | CDS | 3954105 | 558 | - | 0.61828 |
citC | SC0653 | citrate lyase synthetase (citrate (pro-3S)-lyase ligase | chromosome | CDS | 729117 | 1077 | - | 0.517177 |
citC2 | SC0052 | putative citrate lyase synthetase (citrate (pro-3S)-lyase ligase | chromosome | CDS | 62893 | 1044 | + | 0.533525 |
citD | SC0652 | citrate lyase acyl carrier protein (gamma chain) | chromosome | CDS | 728824 | 297 | - | 0.565657 |
citD2 | SC0053 | putative citrate lyase acyl carrier protein (gamma chain) | chromosome | CDS | 63966 | 294 | + | 0.568027 |
citF | SC0650 | citrate lyase alpha chain/citrate-ACP transferase | chromosome | CDS | 726380 | 1530 | - | 0.586928 |
citF2 | SC0055 | putative citrate lyase alpha chain/citrate-ACP transferase | chromosome | CDS | 65136 | 1521 | + | 0.553583 |
citN | SC0051 | putative citrate-sodium symport | chromosome | CDS | 61308 | 1341 | - | 0.49217 |
cybC | SC4293 | cytochrome b(562) | chromosome | CDS | 4597767 | 387 | + | 0.478036 |
cybH | SC1554 | putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit | chromosome | CDS | 1649450 | 675 | - | 0.511111 |
cybH | SC1783 | putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit | chromosome | CDS | 1902927 | 732 | + | 0.553279 |
cydA | SC0744 | cytochrome d terminal oxidase, polypeptide subunit I | chromosome | CDS | 838731 | 1569 | + | 0.534098 |
cydA | SC0401 | cytochrome BD2 subunit I | chromosome | CDS | 453308 | 1404 | + | 0.553419 |
cydB | SC0745 | cytochrome d terminal oxidase polypeptide subunit II | chromosome | CDS | 840315 | 1140 | + | 0.550877 |
cydB | SC0402 | cytochrome BD2 subunit II | chromosome | CDS | 454708 | 1011 | + | 0.552918 |
cydC | SC0910 | ABC superfamily (atp&memb), cytochrome-related transporter | chromosome | CDS | 1015557 | 1722 | - | 0.574332 |
cydD | SC0911 | ABC superfamily (atp&memb), cytochrome-related transporter, Zn sensitive | chromosome | CDS | 1017279 | 1767 | - | 0.564233 |
cyoA | SC0485 | cytochrome o ubiquinol oxidase subunit II | chromosome | CDS | 541547 | 957 | - | 0.506792 |
cyoB | SC0484 | cytochrome o ubiquinol oxidase subunit I | chromosome | CDS | 539545 | 1992 | - | 0.540161 |
cyoC | SC0483 | cytochrome o ubiquinol oxidase subunit III | chromosome | CDS | 538941 | 615 | - | 0.536585 |
cyoD | SC0482 | cytochrome o ubiquinol oxidase subunit IV | chromosome | CDS | 538612 | 330 | - | 0.512121 |
dctA | SC3548 | DAACS family, C4-dicarboxylic acids transport protein | chromosome | CDS | 3750171 | 1287 | - | 0.532246 |
dcuC | SC0657 | DcuC family, dicarboxylate transporter | chromosome | CDS | 732942 | 1386 | - | 0.53824 |
dld | SC2183 | D-lactate dehydrogenase, NADH independent | chromosome | CDS | 2286252 | 1731 | + | 0.54015 |
dmsA | SC0918 | anaerobic dimethyl sulfoxide reductase, subunit A | chromosome | CDS | 1029273 | 2445 | + | 0.533333 |
dmsA | SC4183 | putative anaerobic dimethyl sulfoxide reductase, subunit A | chromosome | CDS | 4486433 | 2430 | + | 0.555556 |
dmsA | SC2527 | putative anaerobic dimethylsulfoxide reductase | chromosome | CDS | 2683593 | 2406 | - | 0.54946 |
dmsB | SC0919 | anaerobic dimethyl sulfoxide reductase, subunit B | chromosome | CDS | 1031729 | 618 | + | 0.571197 |
dmsB | SC4184 | putative anaerobic dimethyl sulfoxide reductase, subunit B | chromosome | CDS | 4488876 | 627 | + | 0.535885 |
dmsB | SC1514 | anaerobic dimethyl sulfoxide reductase, subunit B | chromosome | CDS | 1611948 | 423 | - | 0.600473 |
dmsB | SC0643 | putative hydrogenase protein | chromosome | CDS | 718529 | 558 | + | 0.537634 |
dmsB | SC2526 | putative anaerobic dimethylsulfoxide reductase | chromosome | CDS | 2682967 | 630 | - | 0.536508 |
dsbA | SC3890 | periplasmic protein disulfide isomerase I | chromosome | CDS | 4138277 | 624 | + | 0.504808 |
dsbA | SC3137 | putative thiol-disulfide isomerase and thioredoxin | chromosome | CDS | 3317080 | 672 | + | 0.456845 |
dsbD | SC4201 | thiol:disulfide interchange protein, cytochrome c-type biogenesis | chromosome | CDS | 4502083 | 1704 | - | 0.567488 |
etfA | SC0849 | putative electron transfer flavoprotein alpha subunit | chromosome | CDS | 953886 | 948 | + | 0.413502 |
etfB | SC0848 | putative electron transfer flavoprotein beta subunit | chromosome | CDS | 953021 | 855 | + | 0.377778 |
etfD | SC0852 | putative dehydrogenase (flavoproteins) | chromosome | CDS | 956740 | 1686 | + | 0.432977 |
eutD | SC2462 | putative phosphotransacetylase in ethanolamine utilization | chromosome | CDS | 2590145 | 1017 | - | 0.621436 |
eutE | SC2459 | putative aldehyde oxidoreductase in ethanolamine utilization | chromosome | CDS | 2587999 | 1404 | - | 0.598291 |
eutG | SC2457 | paral putative transport protein in ethanolamine utilization | chromosome | CDS | 2585972 | 1188 | - | 0.631313 |
eutM | SC2461 | putative detox protein in ethanolamine utilization | chromosome | CDS | 2589814 | 291 | - | 0.61512 |
eutN | SC2460 | putative detox protein in ethanolamine utilization | chromosome | CDS | 2589414 | 288 | - | 0.572917 |
fdhD | SC3927 | putative formate dehydrogenase formation protein | chromosome | CDS | 4181048 | 837 | + | 0.551971 |
fdnH | SC1570 | formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible | chromosome | CDS | 1663366 | 885 | - | 0.537853 |
fdnI | SC1569 | formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit, nitrate-inducible | chromosome | CDS | 1662717 | 657 | - | 0.484018 |
fdoH | SC3926 | formate dehydrogenase-O, Fe-S subunit | chromosome | CDS | 4176888 | 903 | - | 0.584718 |
fdoI | SC3925 | formate dehydrogenase, cytochrome B556 (FDO) subunit | chromosome | CDS | 4176256 | 636 | - | 0.52044 |
fdrA | SC0568 | putative acyl-CoA synthetase, involved in protein transport | chromosome | CDS | 635710 | 1665 | + | 0.571772 |
fdx | SC2533 | [2FE-2S] ferredoxin, electron carrer protein, believed to be involved in assembly of Fe-S clusters | chromosome | CDS | 2698468 | 336 | - | 0.529762 |
feaB | SC3069 | putative NAD-dependent aldehyde dehydrogenase | chromosome | CDS | 3248460 | 1485 | + | 0.512458 |
fixA | SC0070 | putative flavoprotein reductase, carnitine metabolism | chromosome | CDS | 82765 | 771 | + | 0.522698 |
fixB | SC0071 | putative electron transfer flavoprotein, carnitine metabolism | chromosome | CDS | 83551 | 942 | + | 0.592357 |
fixC | SC0072 | related to carnitine metabolism | chromosome | CDS | 84542 | 1287 | + | 0.554779 |
fixX | SC0073 | putative ferredoxin, carnitine metabolism | chromosome | CDS | 85825 | 288 | + | 0.552083 |
fldA | SC0714 | flavodoxin 1 | chromosome | CDS | 799020 | 531 | - | 0.510358 |
fldB | SC2985 | flavodoxin 2 | chromosome | CDS | 3163549 | 579 | + | 0.519862 |
fpr | SC3973 | ferredoxin-NADP reductase | chromosome | CDS | 4225416 | 747 | - | 0.556894 |
frdA | SC0711 | putative periplasmic protein | chromosome | CDS | 795744 | 1404 | - | 0.581197 |
frdA | SC4222 | fumarate reductase, anaerobic, flavoprotein subunit | chromosome | CDS | 4518682 | 1875 | - | 0.566933 |
frdB | SC4221 | fumarate reductase, anaerobic, Fe-S protein subunit | chromosome | CDS | 4517955 | 735 | - | 0.537415 |
frdC | SC4220 | fumarate reductase, anaerobic, membrane anchor polypeptide | chromosome | CDS | 4517549 | 396 | - | 0.517677 |
frdD | SC4219 | fumarate reductase, anaerobic, membrane anchor polypeptide | chromosome | CDS | 4517179 | 360 | - | 0.552778 |
fre | SC3877 | FMN reductase | chromosome | CDS | 4119394 | 702 | + | 0.524217 |
fucO | SC2912 | L-1,2-propanediol oxidoreductase | chromosome | CDS | 3084211 | 1143 | - | 0.552931 |
fumA | SC0761 | fumarate hydratase, alpha subunit | chromosome | CDS | 854123 | 846 | - | 0.407801 |
fumA | SC1485 | fumarase A (fumarate hydratase class I), aerobic isozyme | chromosome | CDS | 1580344 | 1647 | + | 0.545234 |
fumB | SC0760 | fumarate hydratase Class I anaerobic | chromosome | CDS | 853563 | 546 | - | 0.430403 |
fumB | SC4179 | fumarase B (fumarate hydratase class I), anaerobic isozyme | chromosome | CDS | 4479899 | 1647 | - | 0.545234 |
fumC | SC1486 | fumarase C (fumarate hydratase Class II) | chromosome | CDS | 1582158 | 1404 | + | 0.553419 |
gabD | SC2723 | succinate-semialdehyde dehydrogenase I, NADP-dependent | chromosome | CDS | 2894817 | 1449 | + | 0.57764 |
galT | SC0773 | galactose-1-phosphate uridylyltransferase | chromosome | CDS | 868162 | 1047 | - | 0.583572 |
gldA | SC4000 | glycerol dehydrogenase, NAD | chromosome | CDS | 4257077 | 1098 | - | 0.579235 |
gldA | SC3460 | putative glycerol dehydrogenase | chromosome | CDS | 3645795 | 1110 | - | 0.547748 |
glpA | SC2287 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit | chromosome | CDS | 2404517 | 1629 | + | 0.585021 |
glpC | SC2289 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit | chromosome | CDS | 2407391 | 1191 | + | 0.538203 |
glpD | SC3457 | sn-glycerol-3-phosphate dehydrogenase (aerobic) | chromosome | CDS | 3642031 | 1509 | + | 0.55666 |
glpK | SC3975 | glycerol kinase | chromosome | CDS | 4227381 | 1509 | - | 0.565938 |
glpQ | SC2285 | glycerophosphodiester phosphodiesterase, periplasmic | chromosome | CDS | 2401812 | 1071 | - | 0.487395 |
gltA | SC0736 | citrate synthase | chromosome | CDS | 825155 | 1284 | - | 0.527259 |
gltP | SC4163 | DAACS family, glutamate:aspartate symport protein | chromosome | CDS | 4457560 | 1311 | + | 0.540046 |
gor | SC3526 | glutathione oxidoreductase | chromosome | CDS | 3722724 | 1353 | + | 0.546933 |
gox | SC1616 | putative oxidase | chromosome | CDS | 1720999 | 1203 | - | 0.481297 |
gpsA | SC3623 | glycerol-3-phosphate dehydrogenase (NAD+) | chromosome | CDS | 3837520 | 1020 | - | 0.57549 |
hcp | SC0892 | hybrid cluster protein | chromosome | CDS | 997985 | 1653 | - | 0.564428 |
hcr | SC0891 | NADH oxidoreductase for hcp gene product | chromosome | CDS | 997005 | 972 | - | 0.5607 |
hemG | SC3883 | protoporphyrin oxidase | chromosome | CDS | 4129368 | 546 | + | 0.507326 |
hmpA | SC2551 | dihydropteridine reductase 2 and nitric oxide dioxygenase activity | chromosome | CDS | 2715866 | 1191 | + | 0.565071 |
hoxQ | SC1550 | putative hydrogenase | chromosome | CDS | 1647051 | 1062 | - | 0.5 |
hpaE | SC1052 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1168931 | 1467 | + | 0.599864 |
hupD | SC1553 | putative hydrogenase maturation protease | chromosome | CDS | 1648836 | 609 | - | 0.530378 |
hupK | SC1549 | putative dehydrogenase protein | chromosome | CDS | 1646176 | 822 | - | 0.541363 |
hyaD | SC1784 | putative hydrogenase maturation protease | chromosome | CDS | 1903655 | 597 | + | 0.576214 |
hyaE | SC1551 | putative hydrogenase | chromosome | CDS | 1648130 | 411 | - | 0.530414 |
hyaE | SC1785 | putative thiol-disulfide isomerase and thioredoxins | chromosome | CDS | 1904241 | 405 | + | 0.577778 |
hybA | SC3090 | function unknown, intitally thought to be hydrogenase-2 small subunit which now identified as hybO | chromosome | CDS | 3271113 | 987 | - | 0.537994 |
hybB | SC3089 | putative cytochrome Ni/Fe component of hydrogenase-2 | chromosome | CDS | 3269945 | 1179 | - | 0.526718 |
hybC | SC3088 | hydrogenase-2, large subunit | chromosome | CDS | 3268245 | 1704 | - | 0.547535 |
hybD | SC3087 | putative processing element for hydrogenase-2 | chromosome | CDS | 3267751 | 495 | - | 0.545455 |
hycB | SC2785 | hydrogenase-3, iron-sulfur subunit (part of FHL complex) | chromosome | CDS | 2952788 | 609 | - | 0.576355 |
hycC | SC2784 | hydrogenase 3, membrane subunit (part of FHL complex) | chromosome | CDS | 2950971 | 1818 | - | 0.606711 |
hycD | SC2783 | hydrogenase 3, membrane subunit (part of FHL complex) | chromosome | CDS | 2950036 | 924 | - | 0.589827 |
hycE | SC2782 | Formate hydrogenlyase subunit 5 precursor | chromosome | CDS | 2948309 | 1710 | - | 0.571345 |
hycF | SC2781 | hydrogenase 3, putative quinone oxidoreductase | chromosome | CDS | 2947757 | 543 | - | 0.558011 |
hycG | SC2780 | hydrogenase activity | chromosome | CDS | 2946990 | 768 | - | 0.595052 |
hycI | SC2778 | protease involved in processing C-terminal end of HycE | chromosome | CDS | 2946120 | 471 | - | 0.55414 |
hydN | SC2776 | electron transport protein (FeS senter) from formate to hydrogen | chromosome | CDS | 2944538 | 546 | - | 0.565934 |
hypO | SC3091 | putative Ni/Fe hydrogenases, small subunit | chromosome | CDS | 3272102 | 1119 | - | 0.543342 |
icdA | SC1247 | isocitrate dehydrogenase in e14 prophage, specific for NADP+ | chromosome | CDS | 1357089 | 177 | + | 0.497175 |
icdA | SC1189 | isocitrate dehydrogenase in e14 prophage, specific for NADP+ | chromosome | CDS | 1305665 | 1251 | + | 0.517986 |
iroB | SC2704 | putative glycosyl transferase, related to UDP-glucuronosyltransferase | chromosome | CDS | 2871059 | 1116 | + | 0.5681 |
ldhA | SC1642 | fermentative D-lactate dehydrogenase, NAD-dependent | chromosome | CDS | 1753212 | 990 | + | 0.514141 |
leuB | SC0108 | 3-isopropylmalate dehydrogenase | chromosome | CDS | 125408 | 1092 | - | 0.557692 |
lldD | SC3618 | L-lactate dehydrogenase | chromosome | CDS | 3830839 | 1191 | + | 0.598657 |
lldP | SC3616 | LctP transporter, L-lactate permease | chromosome | CDS | 3828414 | 1656 | + | 0.573068 |
lpdA | SC0153 | lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L protein of glycine cleavage complex second part | chromosome | CDS | 176758 | 1428 | + | 0.542717 |
maeB | SC2467 | paral putative transferase | chromosome | CDS | 2593863 | 2280 | - | 0.562719 |
mbhL | SC1555 | putative hydrogenase-1 large subunit | chromosome | CDS | 1650144 | 804 | - | 0.537313 |
mbhS | SC1782 | hydrogenase-1 small subunit | chromosome | CDS | 1900029 | 1089 | + | 0.573003 |
mcpF | SC1222 | Gifsy-1 prophage minor capsid protein FII | chromosome | CDS | 1332906 | 384 | + | 0.567708 |
mdh | SC3297 | malate dehydrogenase | chromosome | CDS | 3481406 | 939 | - | 0.536741 |
mioC | SC3788 | initiation of chromosome replication | chromosome | CDS | 4019221 | 444 | - | 0.518018 |
napA | SC2264 | periplasmic nitrate reductase, large subunit, in complex with NapB | chromosome | CDS | 2370702 | 2487 | - | 0.569361 |
napB | SC2261 | periplasmic nitrate reductase, small subunit, cytochrome C550, in complex with NapA | chromosome | CDS | 2368579 | 450 | - | 0.577778 |
napC | SC2260 | periplasmic nitrate reductase, cytochrome c-type protein | chromosome | CDS | 2367967 | 603 | - | 0.519071 |
napG | SC2263 | ferredoxin-type protein: electron transfer | chromosome | CDS | 2370000 | 696 | - | 0.606322 |
napH | SC2262 | ferredoxin-type protein: electron transfer | chromosome | CDS | 2369144 | 870 | - | 0.541379 |
narG | SC1758 | nitrate reductase 1, alpha subunit | chromosome | CDS | 1871393 | 3744 | - | 0.560897 |
narH | SC1757 | nitrate reductase 1, FeS (beta) subunit | chromosome | CDS | 1869861 | 1536 | - | 0.552083 |
narI | SC1755 | nitrate reductase 1, cytochrome b(NR), gamma subunit | chromosome | CDS | 1868477 | 678 | - | 0.551622 |
narJ | SC1756 | nitrate reductase 1, delta subunit, chaperone required for molybdenum cofactor assembly in nitrate reductase 1 | chromosome | CDS | 1869154 | 711 | - | 0.552743 |
narV | SC1578 | nitrate reductase 2, gamma subunit | chromosome | CDS | 1679788 | 1368 | + | 0.544591 |
narY | SC1577 | nitrate reductase 2, beta subunit | chromosome | CDS | 1678244 | 1545 | + | 0.53657 |
ndh | SC1161 | respiratory NADH dehydrogenase 2; cupric reductase | chromosome | CDS | 1275842 | 1281 | + | 0.54879 |
nemA | SC1455 | N-ethylmaleimide reductase | chromosome | CDS | 1550615 | 1098 | - | 0.57377 |
nfnB | SC0609 | dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase | chromosome | CDS | 679581 | 654 | - | 0.544343 |
nhg | SC2192 | putative monooxygenase | chromosome | CDS | 2294285 | 1194 | - | 0.586265 |
nifJ | SC1645 | putative pyruvate-flavodoxin oxidoreductase | chromosome | CDS | 1755308 | 3525 | + | 0.549504 |
nifU | SC2536 | NifU homologs involved in Fe-S cluster formation | chromosome | CDS | 2701730 | 387 | - | 0.511628 |
nirB | SC3408 | nitrite reductase, large subunit | chromosome | CDS | 3577953 | 2544 | + | 0.567217 |
norV | SC2773 | putative flavoprotein | chromosome | CDS | 2939486 | 1440 | + | 0.534028 |
nrfC | SC4158 | putative nitrite reductase; formate-dependent, Fe-S centers | chromosome | CDS | 4452759 | 672 | + | 0.56994 |
nuoA | SC2328 | NADH dehydrogenase I chain A | chromosome | CDS | 2453451 | 444 | - | 0.531532 |
nuoB | SC2327 | NADH dehydrogenase I chain B | chromosome | CDS | 2452773 | 663 | - | 0.542986 |
nuoC | SC2326 | NADH dehydrogenase I chain C,D | chromosome | CDS | 2450884 | 1803 | - | 0.568497 |
nuoE | SC2325 | NADH dehydrogenase I chain E | chromosome | CDS | 2450381 | 501 | - | 0.560878 |
nuoF | SC2324 | NADH dehydrogenase I chain F | chromosome | CDS | 2449047 | 1338 | - | 0.584454 |
nuoG | SC2323 | NADH dehydrogenase I chain G | chromosome | CDS | 2446290 | 2733 | - | 0.585803 |
nuoH | SC2322 | NADH dehydrogenase I chain H | chromosome | CDS | 2445316 | 978 | - | 0.546012 |
nuoI | SC2321 | NADH dehydrogenase I chain I | chromosome | CDS | 2444759 | 543 | - | 0.541436 |
nuoJ | SC2320 | NADH dehydrogenase I chain J | chromosome | CDS | 2444194 | 555 | - | 0.569369 |
nuoK | SC2319 | NADH dehydrogenase I chain K | chromosome | CDS | 2443895 | 303 | - | 0.544554 |
nuoL | SC2318 | NADH dehydrogenase I chain L | chromosome | CDS | 2442057 | 1842 | - | 0.578719 |
nuoM | SC2317 | NADH dehydrogenase I chain M | chromosome | CDS | 2440214 | 1530 | - | 0.562092 |
nuoN | SC2316 | NADH dehydrogenase I chain N | chromosome | CDS | 2438750 | 1458 | - | 0.59465 |
oadA | SC3290 | putative sodium ion pump oxaloacetate decarboxylase alpha chain | chromosome | CDS | 3474787 | 1776 | - | 0.640203 |
oadA | SC0049 | putative sodium ion pump oxaloacetate decarboxylase alpha chain | chromosome | CDS | 59116 | 1776 | - | 0.640203 |
oadA | SC0765 | putative sodium ion pump oxaloacetate decarboxylase alpha chain | chromosome | CDS | 858769 | 1776 | + | 0.640203 |
oadB | SC0766 | putative oxalacetate decarboxylase, subunit beta | chromosome | CDS | 860557 | 1302 | + | 0.642857 |
oadB | SC3289 | putative oxalacetate decarboxylase, subunit beta | chromosome | CDS | 3473473 | 1302 | - | 0.638249 |
oadB | SC0048 | putative oxalacetate decarboxylase, subunit beta | chromosome | CDS | 57802 | 1302 | - | 0.642089 |
oadG | SC0764 | putative oxalacetate decarboxylase, subunit gamma | chromosome | CDS | 858514 | 240 | + | 0.591667 |
oadG | SC3291 | putative sodium ion pump oxaloacetate decarboxylase alpha chain | chromosome | CDS | 3476578 | 243 | - | 0.592593 |
oag3 | SC0050 | putative oxalacetate decarboxylase, subunit gamma | chromosome | CDS | 60907 | 243 | - | 0.567901 |
pckA | SC3432 | phosphoenolpyruvate carboxykinase | chromosome | CDS | 3610057 | 1620 | + | 0.535185 |
pduA | SC2046 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2138585 | 285 | + | 0.536842 |
pduJ | SC2053 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2144789 | 276 | + | 0.557971 |
pduK | SC2054 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2145068 | 483 | + | 0.554865 |
pduN | SC2057 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2146674 | 276 | + | 0.608696 |
pduP | SC2059 | Propanediol utilization: CoA-dependent propionaldehyde dehydrogenase | chromosome | CDS | 2147966 | 1395 | + | 0.587097 |
pduQ | SC2060 | Propanediol utilization: propanol dehydrogenase | chromosome | CDS | 2149372 | 1113 | + | 0.604672 |
pduS | SC2061 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2150481 | 1356 | + | 0.615782 |
pduT | SC2062 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2151839 | 330 | + | 0.545455 |
pduW | SC2066 | Propanediol utilization: propionate kinase | chromosome | CDS | 2152734 | 1215 | + | 0.52428 |
pflB | SC0927 | pyruvate formate lyase I, induced anaerobically | chromosome | CDS | 1039049 | 2283 | - | 0.51555 |
pflF | SC0838 | putative pyruvate formate lyase | chromosome | CDS | 937759 | 2433 | - | 0.557337 |
phsA | SC2074 | Hydrogen sulfide production: membrane anchoring protein | chromosome | CDS | 2159967 | 2277 | - | 0.555995 |
phsB | SC2073 | Hydrogen sulfide production: iron-sulfur subunit; electron transfer | chromosome | CDS | 2159374 | 579 | - | 0.53886 |
pntA | SC1497 | pyridine nucleotide transhydrogenase (proton pump), alpha subunit | chromosome | CDS | 1593855 | 1530 | + | 0.547712 |
pntB | SC1498 | pyridine nucleotide transhydrogenase (proton pump), beta subunit | chromosome | CDS | 1595395 | 1389 | + | 0.547156 |
ppa | SC4288 | inorganic pyrophosphatase | chromosome | CDS | 4592259 | 531 | - | 0.531073 |
ppc | SC4009 | phosphoenolpyruvate carboxylase | chromosome | CDS | 4269620 | 2652 | - | 0.570513 |
prkB | SC3398 | putative phosphoribulokinase | chromosome | CDS | 3568407 | 870 | + | 0.549425 |
prpC | SC0410 | putative citrate synthase | chromosome | CDS | 463530 | 1170 | + | 0.553846 |
putA | SC1074 | putative periplasmic protein | chromosome | CDS | 1186895 | 3963 | - | 0.589957 |
qor | SC4124 | quinone oxidoreductase, NADPH dependent | chromosome | CDS | 4400161 | 984 | - | 0.558943 |
rnfA | SC1477 | putative oxidoreductase, inner membrane protein | chromosome | CDS | 1571939 | 582 | - | 0.503436 |
rnfB | SC1476 | putative alternative beta subunit of Na+-transporting NADH:ubiquinone oxidoreductase | chromosome | CDS | 1571361 | 579 | - | 0.557858 |
rnfC | SC1475 | putative respiratory-chain NADH dehydrogenase | chromosome | CDS | 1569254 | 2115 | - | 0.593853 |
rnfD | SC1474 | putative oxidoreductase | chromosome | CDS | 1568195 | 1059 | - | 0.559962 |
sdhA | SC0738 | succinate dehydrogenase, flavoprotein subunit | chromosome | CDS | 827922 | 1767 | + | 0.585739 |
sdhB | SC0739 | succinate dehydrogenase, Fe-S protein | chromosome | CDS | 829702 | 720 | + | 0.509722 |
sdhC | SC0737 | succinate dehydrogenase, cytochrome b556 | chromosome | CDS | 827192 | 390 | + | 0.482051 |
sfcA | SC1567 | NAD-linked malate dehydrogenase | chromosome | CDS | 1659597 | 1734 | + | 0.528835 |
sucA | SC0740 | 2-oxoglutarate dehydrogenase (decarboxylase component) | chromosome | CDS | 830947 | 2802 | + | 0.558887 |
sucB | SC0741 | 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) | chromosome | CDS | 833763 | 1209 | + | 0.563275 |
sucC | SC0742 | succinyl-CoA synthetase, beta subunit | chromosome | CDS | 835113 | 1167 | + | 0.563839 |
sucD | SC0743 | succinyl-CoA synthetase, alpha subunit | chromosome | CDS | 836279 | 870 | + | 0.565517 |
tas | SC2947 | putative aldo/keto reductase | chromosome | CDS | 3125243 | 1041 | + | 0.548511 |
tdcD | SC3188 | propionate kinase/acetate kinase II, anaerobic | chromosome | CDS | 3370822 | 1209 | - | 0.500414 |
tdcE | SC3187 | pyruvate formate-lyase 4/ 2-ketobutyrate formate-lyase | chromosome | CDS | 3368494 | 2295 | - | 0.548148 |
thiO | SC3821 | Thioredoxin 1 (TRX1) | chromosome | CDS | 4059887 | 408 | + | 0.487745 |
torA | SC3740 | trimethylamine N-oxide reductase subunit | chromosome | CDS | 3959818 | 2553 | - | 0.559342 |
torC | SC3741 | trimethylamine N-oxide reductase, cytochrome c-type subunit, also has activity as negativer regulator of tor operon | chromosome | CDS | 3962360 | 1185 | - | 0.52827 |
trxC | SC2654 | thioredoxin 2, redox factor | chromosome | CDS | 2805877 | 420 | + | 0.533333 |
ttdA | SC3293 | putative tartrate dehydratase alpha subunit | chromosome | CDS | 3477594 | 900 | - | 0.518889 |
ttdB | SC3292 | putative tartrate dehydratase beta subunit | chromosome | CDS | 3476977 | 618 | - | 0.464401 |
ttrA | SC1404 | Tetrathionate reductase complex, subunit A | chromosome | CDS | 1504099 | 3063 | - | 0.575906 |
ttrB | SC1406 | Tetrathionate reductase complex, subunit B | chromosome | CDS | 1508177 | 735 | - | 0.565986 |
ubiF | SC0699 | putative monooxygenase | chromosome | CDS | 778589 | 1176 | + | 0.60119 |
ubiH | SC2998 | 2-octaprenyl-6-methoxyphynol hydroxylase | chromosome | CDS | 3176633 | 1179 | - | 0.608991 |
udhA | SC4015 | soluble pyridine nucleotide transhydrogenase | chromosome | CDS | 4278349 | 1401 | - | 0.526767 |
ugpQ | SC3482 | glycerophosphodiester phosphodiesterase, cytosolic | chromosome | CDS | 3676061 | 741 | - | 0.587045 |
yajO | SC0462 | putative oxidoreductase / K + channel protein | chromosome | CDS | 518013 | 975 | - | 0.571282 |
ybdH | SC0633 | putative glycerol dehydrogenase | chromosome | CDS | 706224 | 1089 | - | 0.576676 |
yccX | SC1035 | putative phosphohydrolase | chromosome | CDS | 1154188 | 282 | + | 0.560284 |
ydcW | SC1594 | putative aldehyde dehydrogenase | chromosome | CDS | 1699982 | 1446 | - | 0.555325 |
ydgP | SC1473 | putative Na+-transporting NADH:ubiquinone oxidoreductase gamma subunit | chromosome | CDS | 1567571 | 621 | - | 0.521739 |
ydgQ | SC1472 | putative NADH-quinone reductase, membrane protein | chromosome | CDS | 1566876 | 693 | - | 0.536797 |
ydiH | SC1387 | putative cytoplasmic protein | chromosome | CDS | 1487449 | 228 | + | 0.460526 |
ydiJ | SC1385 | paral putative oxidase | chromosome | CDS | 1483926 | 3057 | + | 0.544325 |
ydiQ | SC1373 | putative electron transfer flavoprotein | chromosome | CDS | 1470617 | 765 | - | 0.541176 |
ydiR | SC1372 | putative electron transfer flavoprotein | chromosome | CDS | 1469660 | 936 | - | 0.538462 |
ydiS | SC1371 | flavoprotein | chromosome | CDS | 1468317 | 1287 | - | 0.553225 |
ydiT | SC1370 | putative ferredoxin | chromosome | CDS | 1468027 | 294 | - | 0.479592 |
ydjA | SC1318 | putative oxidoreductase | chromosome | CDS | 1415926 | 552 | + | 0.567029 |
ydjG | SC1312 | Hypothetical oxidoreductase ydjG | chromosome | CDS | 1408639 | 978 | + | 0.523517 |
yeiA | SC2204 | putative dihydropyrimidine dehydrogenase | chromosome | CDS | 2305142 | 1236 | + | 0.513754 |
yfaE | SC2282 | putative ferredoxin | chromosome | CDS | 2399210 | 255 | + | 0.560784 |
yfhL | SC2571 | putative ferredoxin | chromosome | CDS | 2742152 | 261 | + | 0.467433 |
yfiQ | SC2656 | putative acetyl-CoA synthetase | chromosome | CDS | 2807103 | 2661 | + | 0.556182 |
ygdR | SC2946 | putative POT family, peptide transport protein | chromosome | CDS | 3124834 | 219 | + | 0.474886 |
yggX | SC3052 | putative cytoplasmic protein | chromosome | CDS | 3229257 | 276 | + | 0.474638 |
yghZ | SC2409 | putative oxidoreductase | chromosome | CDS | 2537947 | 999 | + | 0.543544 |
ygiR | SC3112 | putative Fe-S oxidoreductase family 2 | chromosome | CDS | 3289700 | 2172 | - | 0.570902 |
yhbW | SC3217 | putative alkanal monooxygenase | chromosome | CDS | 3398360 | 1008 | + | 0.582341 |
yhdH | SC3314 | putative oxidoreductase | chromosome | CDS | 3501746 | 975 | + | 0.574359 |
yiaE | SC3578 | 2-keto-D-gluconate reductase | chromosome | CDS | 3784468 | 975 | + | 0.56718 |
yieI | SC0158 | Hypothetical protein yieI | chromosome | CDS | 184245 | 465 | - | 0.419355 |
yjeS | SC4231 | putative Fe-S protein | chromosome | CDS | 4531928 | 1188 | - | 0.540404 |
yjmC | SC3022 | putative malate/L-lactate dehydrogenase | chromosome | CDS | 3201841 | 1008 | - | 0.511905 |
ykgC | SC0601 | putative oxidoreductase | chromosome | CDS | 670480 | 1326 | + | 0.527903 |
yneI | SC1541 | putative succinate-semialdehyde dehydrogenase | chromosome | CDS | 1639331 | 1389 | + | 0.568035 |
ynfE | SC1516 | putative dimethyl sulphoxide reductase, chain A1 | chromosome | CDS | 1615112 | 2442 | - | 0.542179 |
ynfF | SC1515 | putative dimethyl sulphoxide reductase | chromosome | CDS | 1612578 | 2436 | - | 0.550082 |
yqcA | SC2903 | putative MFS superfamily, D-glucarate permease | chromosome | CDS | 3074783 | 450 | - | 0.54 |
yqhD | SC3108 | putative alcohol dehydrogenase | chromosome | CDS | 3284898 | 1164 | + | 0.554124 |
yyaE | SC0642 | putative oxidoreductase protein | chromosome | CDS | 716253 | 2280 | + | 0.55 |