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2024-05-03 08:29:24

Gene list

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COG category: Energy production and conversion
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 107

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Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0118 H+-transporting two-sector ATPase (subunit b')chromosome CDS128407 540 + 0.309259
NA SAR11_1223 Cytochrome b561 familychromosome CDS1169944 543 + 0.239411
NA SAR11_1199 conserved hypothetical proteinchromosome CDS1149091 555 + 0.304505
NA SAR11_0073 possible pilin protein similar to PilUchromosome CDS88021 726 - 0.356749
NA SAR11_0683 NifU-like N terminal domainchromosome CDS668203 399 - 0.280702
NA SAR11_1040 H+ translocating pyrophosphate synthasechromosome CDS1011564 2106 - 0.353751
NA SAR11_0724 NADH-ubiquinone oxidoreductase 17.2 kD subunit of complex Ichromosome CDS707855 360 + 0.294444
NA SAR11_1340 Luciferase-like monooxygenasechromosome CDS1277497 993 + 0.330312
NA SAR11_0532 FAD oxidase familychromosome CDS524613 1365 - 0.205128
NA SAR11_1250 probable electron transfer flavoprotein-ubiquinone oxidoreductasechromosome CDS1190176 1605 - 0.327726
NA SAR11_1215 Sulfotransferase domainchromosome CDS1162229 843 - 0.232503
NA SAR11_1287 iron-containing alcohol dehydrogenasechromosome CDS1221431 1167 - 0.330763
NA SAR11_0862 probable aldehyde dehydrogenasechromosome CDS830726 1521 + 0.343853
NA SAR11_1231 Thioredoxinchromosome CDS1175833 369 - 0.281843
NA SAR11_0529 zinc-containing alcohol dehydrogenasechromosome CDS521587 1041 + 0.253602
NA SAR11_1328 Aldehyde dehydrogenase familychromosome CDS1263228 1437 - 0.346555
NA SAR11_0244 possible membrane portion of succinate dehydrogenasechromosome CDS246931 327 - 0.238532
NA SAR11_0275 probable dehydrogenasechromosome CDS277460 954 - 0.325996
aceA SAR11_1240 isocitrate lyasechromosome CDS1182407 1275 - 0.338039
aceE SAR11_0429 pyruvate dehydrogenase (lipoamide) e1 componentchromosome CDS416904 3039 + 0.338927
aceF SAR11_0430 dihydrolipoamide S-acetyltransferasechromosome CDS419944 1272 + 0.29717
acnA SAR11_1324 aconitate hydratasechromosome CDS1258379 2670 - 0.327341
aldA SAR11_0756 Acetaldehyde dehydrogenase II (ACDH-II)chromosome CDS735368 1551 + 0.350741
aldH SAR11_0796 aldehyde dehydrogenase (NAD)chromosome CDS769202 1482 + 0.336032
aprA SAR11_0837 adenylyl-sulfate reductase chain Achromosome CDS805989 1860 + 0.375806
aprB SAR11_0836 adenylyl-sulfate reductase chain Bchromosome CDS805519 471 + 0.333333
atpA SAR11_0232 H+-transporting two-sector ATPase (F0F1-type ATP synthase) alpha chainchromosome CDS230059 1536 - 0.347656
atpB SAR11_0116 H+-transporting two-sector ATPase (subunit A)chromosome CDS127369 735 + 0.330612
atpC SAR11_0229 ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)chromosome CDS227367 393 - 0.272265
atpD SAR11_0230 F1-ATP Synthase Beta Chainchromosome CDS227759 1419 - 0.373502
atpE SAR11_0117 H+-transporting two-sector ATPase (subunit C)chromosome CDS128123 228 + 0.394737
atpF SAR11_0119 H+-transporting two-sector ATPase (subunit b)chromosome CDS128936 498 + 0.251004
atpG SAR11_0231 H+-transporting two-sector ATPase (F0F1-type ATP synthase) gamma chainchromosome CDS229180 876 - 0.308219
atpH SAR11_0233 H+-transporting two-sector ATPase (F0F1-type ATP synthase) delta chainchromosome CDS231595 558 - 0.281362
ccmG SAR11_0283 Cytochrome C biogenesis protein ccmGchromosome CDS285731 522 - 0.250958
comC SAR11_0804 Malate/L-sulfolactate dehydrogenase multifunction enzymechromosome CDS778447 1011 - 0.310584
cox1 SAR11_0134 cytochrome-c oxidasechromosome CDS141011 1635 - 0.356575
coxB SAR11_0135 probable cytochrome c oxidase polypeptide II (Cytochrome aa3 subunit 2)chromosome CDS142648 816 - 0.329657
coxC SAR11_0130 cytochrome-c oxidasechromosome CDS138618 789 - 0.352345
cycA SAR11_1222 cytochrome c'chromosome CDS1169497 444 - 0.286036
cycM SAR11_0504 cytochrome Cchromosome CDS491305 540 - 0.361111
cytC SAR11_1184 Cytochrome cchromosome CDS1137048 429 - 0.307692
dhaS SAR11_1343 betaine-aldehyde dehydrogenasechromosome CDS1279864 1482 + 0.340756
etfA SAR11_1251 electron transfer flavoprotein alpha-subunitchromosome CDS1191819 954 - 0.333333
etfB SAR11_1252 electron transfer flavoprotein beta-chainchromosome CDS1192772 750 - 0.336
fbcH SAR11_0098 ubiquinol-cytochrome-c reductasechromosome CDS110461 780 - 0.341026
fdhD SAR11_0681 formate dehydrogenase chain Dchromosome CDS666877 843 - 0.282325
fdsB SAR11_0680 NAD-dependent formate dehydrogenase beta subunitchromosome CDS665215 1530 - 0.322222
fdxA SAR11_0424 ferredoxinchromosome CDS411528 327 - 0.336391
fdxB SAR11_0626 ferredoxinchromosome CDS615153 321 + 0.364486
fumC SAR11_0012 Fumarate hydratase class II (Fumarase C)chromosome CDS10957 1389 + 0.309575
gabD SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P))chromosome CDS742383 1443 + 0.349965
glcB SAR11_0510 malate synthasechromosome CDS496262 2196 - 0.318306
glcD SAR11_0278 (S)-2-hydroxy-acid oxidasechromosome CDS280945 1497 - 0.337341
glcE SAR11_0277 (S)-2-hydroxy-acid oxidasechromosome CDS279711 1269 - 0.293932
glcF SAR11_0276 (S)-2-hydroxy-acid oxidasechromosome CDS278416 1296 - 0.295525
glpC SAR11_0400 Anaerobic glycerol-3-phosphate dehydrogenase subunit Cchromosome CDS390175 1332 + 0.328078
gpsA SAR11_1295 glycerol-3-phosphate dehydrogenase (NAD)chromosome CDS1228099 1029 - 0.304179
icdA SAR11_0644 isocitrate dehydrogenase (NADP)chromosome CDS631202 1215 - 0.327572
ildD SAR11_0280 l-lactate dehydrogenasechromosome CDS283684 1152 - 0.337674
leuB SAR11_0250 3-isopropylmalate dehydrogenasechromosome CDS253956 1107 - 0.328817
maeB SAR11_0375 probable NADP-dependent malic enzymechromosome CDS364785 2070 - 0.332367
mdh SAR11_0240 Malate dehydrogenasechromosome CDS241897 963 - 0.332295
mmsA SAR11_0241 Methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH)chromosome CDS242868 1494 - 0.349398
nah SAR11_0110 salicylate 1-monooxygenasechromosome CDS121283 1152 - 0.265625
ndufs4 SAR11_1007 ETC complex I subunit conserved regionchromosome CDS986302 282 + 0.251773
nrdE SAR11_0723 ribonucleotide reductase alpha subunitchromosome CDS706918 822 - 0.29562
nuoA SAR11_0883 NADH Dehydrogenase I Chain Achromosome CDS849410 369 + 0.300813
nuoB SAR11_0884 NADH Dehydrogenase I Chain Bchromosome CDS849790 522 + 0.346743
nuoC SAR11_0885 NADH Dehydrogenase I Chain Cchromosome CDS850317 609 + 0.275862
nuoD SAR11_0886 NADH Dehydrogenase I Chain Dchromosome CDS850909 1176 + 0.333333
nuoE SAR11_0887 NADH Dehydrogenase I Chain Echromosome CDS852084 609 + 0.325123
nuoF SAR11_0888 NADH Dehydrogenase I Chain Fchromosome CDS852685 1332 + 0.345345
nuoG SAR11_0889 NADH Dehydrogenase I Chain Gchromosome CDS854009 2040 + 0.302941
nuoH SAR11_0890 NADH Dehydrogenase I Chain Hchromosome CDS856052 999 + 0.325325
nuoI SAR11_0891 NADH Dehydrogenase I Chain Ichromosome CDS857053 486 + 0.308642
nuoJ SAR11_0892 NADH Dehydrogenase I Chain Jchromosome CDS857541 633 + 0.290679
nuoK SAR11_0893 NADH Dehydrogenase I Chain Kchromosome CDS858166 312 + 0.266026
nuoL SAR11_0894 NADH Dehydrogenase I Chain Lchromosome CDS858479 1914 + 0.294148
nuoM SAR11_0896 NADH Dehydrogenase I Chain Mchromosome CDS860392 1494 + 0.312584
nuoN SAR11_0897 NADH Dehydrogenase I Chain Nchromosome CDS861885 1416 + 0.288136
pdhD SAR11_0235 Dihydrolipoyl dehydrogenasechromosome CDS234241 1401 - 0.324054
petA SAR11_0100 cytochrome b6-f complex iron-sulfur subunitchromosome CDS112514 510 - 0.372549
petB SAR11_0099 ubiquinol-cytochrome-c reductasechromosome CDS111245 1260 - 0.346825
pntA SAR11_0574 Alanine dehydrogenase/PNTchromosome CDS564911 1089 + 0.289256
pntAB SAR11_0575 NAD(P) transhydrogenase subunit alpha part 2chromosome CDS566004 309 + 0.300971
pntB SAR11_0576 NAD(p) transhydrogenase subunit betachromosome CDS566315 1395 + 0.341935
ppc SAR11_0780 phosphoenolpyruvate carboxylasechromosome CDS756745 2688 + 0.285342
prpC SAR11_1156 citrate (si)-synthasechromosome CDS1110855 1125 + 0.310222
pta SAR11_0802 Phosphate acetyltransferase (Phosphotransacetylase)chromosome CDS776343 807 - 0.312268
qor SAR11_0143 Quinone oxidoreductasechromosome CDS148483 975 + 0.332308
rbr SAR11_0399 Rubrerythrinchromosome CDS389701 417 + 0.378897
sdhA SAR11_0243 succinate dehydrogenasechromosome CDS245159 1773 - 0.36097
sdhB SAR11_0242 Succinate dehydrogenase iron-sulfur proteinchromosome CDS244386 774 - 0.316537
sdhC SAR11_1721 Succinate dehydrogenase cytochrome bchromosome CDS247259 384 - 0.260417
ssdH SAR11_1288 Aldehyde dehydrogenase familychromosome CDS1222669 1377 + 0.304285
sucA SAR11_0237 2-oxoglutarate dehydrogenase E1 componentchromosome CDS236922 2904 - 0.310262
sucB SAR11_0236 2-oxoglutarate dehydrogenase complex E2 componentchromosome CDS235642 1278 - 0.313772
sucC SAR11_0239 Succinyl-CoA synthetase beta chain (SCS-beta)chromosome CDS240737 1161 - 0.319552
sucD SAR11_0238 Succinyl-CoA synthetase alpha chain (SCS-alpha)chromosome CDS239860 876 - 0.348174
sufE SAR11_0743 Putative nifU-like proteinchromosome CDS727622 471 + 0.273885
tas SAR11_0292 probable aldo/keto reductase-family protein taschromosome CDS291790 1038 + 0.310212
tlpA SAR11_0416 thiol:disulfide interchange proteinchromosome CDS404807 516 + 0.253876
trxA SAR11_0484 thioredoxin 1chromosome CDS473875 318 + 0.339623
ubiH SAR11_0323 Putative ubiquinone biosynthesis monooxgenase COQ6chromosome CDS320387 1134 - 0.207231
yhdH SAR11_1244 zinc-binding alcohol dehydrogenasechromosome CDS1186325 1002 - 0.316367
yiaK SAR11_0966 hypothetical oxidoreductase yiaKchromosome CDS949453 999 + 0.361361