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2024-05-01 08:55:54

Gene list

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COG category: Energy production and conversion
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 126

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd0972 3-methyl-2-oxobutanoate dehydrogenasechromosome CDS920241 1131 + 0.513705
NA Bd3502 potassium voltage-gated channel, shaker-related subfamily, beta memberchromosome CDS3410839 957 + 0.520376
NA Bd0577 thiol oxidoreductasechromosome CDS533592 1509 + 0.527502
NA Bd0974 3-methyl-2-oxobutanoate dehydrogenasechromosome CDS921371 1056 + 0.517992
NA Bd1162 chromosome CDS1105673 678 - 0.511799
NA Bd2284 NADH dehydrogenasechromosome CDS2178526 1461 - 0.530459
NA Bd1318 fumarate hydratasechromosome CDS1245018 1401 + 0.543183
NA Bd3623 Mg-protoporphyrin IX monomethyl ester oxidative cyclasechromosome CDS3519472 1572 + 0.512087
NA Bd1620 acetyl-CoA hydrolase/transferase family proteinchromosome CDS1550876 1488 - 0.530242
NA Bd0581 2-hydroxymuconic semialdehyde dehydrogenasechromosome CDS539494 1386 + 0.536075
NA Bd1609 Molybdopterin oxidoreductasechromosome CDS1541448 1362 + 0.507342
NA Bd1120 conserved hypothetical proteinchromosome CDS1055489 510 + 0.505882
NA Bd2109 hypothetical protein predicted by Glimmer/Criticachromosome CDS2020229 591 - 0.485618
NA Bd1440 hypothetical protein predicted by Glimmer/Criticachromosome CDS1355825 801 - 0.518102
NA Bd0571 chromosome CDS529122 561 + 0.509804
NA Bd2890 oxidoreductasechromosome CDS2797991 1386 + 0.530303
NA Bd2149 nitroreductase family proteinchromosome CDS2053598 768 + 0.519531
NA Bd3832 hypothetical protein predicted by Glimmer/Criticachromosome CDS3699901 1212 + 0.483498
NA Bd2203 putative nitrite reductasechromosome CDS2101431 438 - 0.518265
NA Bd2198 chromosome CDS2097760 798 - 0.506266
NA Bd2839 hypothetical protein predicted by Glimmer/Criticachromosome CDS2747002 1623 - 0.523722
NA Bd0135 chromosome CDS119907 600 + 0.493333
NA Bd2567 pseudoazurinchromosome CDS2481569 360 + 0.522222
NA Bd0256 hypothetical protein predicted by Glimmer/Criticachromosome CDS245742 975 + 0.509744
NA Bd1410 putative Ni,Fe-hydrogenase I cytochrome b subunitchromosome CDS1331634 645 + 0.489922
NA Bd2686 hypothetical protein predicted by Glimmer/Criticachromosome CDS2608990 726 - 0.528926
NA Bd1456 FAD monooxygenase, PheA/TfdB familychromosome CDS1377260 1413 + 0.503185
NA Bd2668 probable cytochrome cchromosome CDS2587426 483 - 0.486542
NA Bd1190 conserved hypothetical proteinchromosome CDS1130891 807 + 0.525403
NA Bd2437 phenol 2-monooxygenasechromosome CDS2345491 723 + 0.479945
NA Bd0718 hypothetical protein predicted by Glimmer/Criticachromosome CDS675456 1737 + 0.527346
NA Bd0092 putative cytochrome bchromosome CDS86828 708 + 0.488701
NA Bd3778 hypothetical proteinchromosome CDS3651955 1146 + 0.521815
NA Bd2764 conserved hypothetical proteinchromosome CDS2682270 552 + 0.492754
NA Bd1702 putative glycerophosphoryl diester phosphodiesterasechromosome CDS1638998 609 + 0.412151
NA Bd1647 putative ferredoxinchromosome CDS1581233 393 + 0.544529
NA Bd1834 NADP-dependent malate dehydrogenasechromosome CDS1760870 369 - 0.509485
NA Bd1611 conserved hypothetical proteinchromosome CDS1543338 582 + 0.508591
NA Bd2614 iron-sulfur cluster-binding proteinchromosome CDS2531299 1407 + 0.544421
NA Bd1341 putative disulphide-isomerasechromosome CDS1269236 1674 + 0.497013
NA Bd2664 FMN oxidoreductasechromosome CDS2582560 1071 - 0.551821
NA Bd2272 spb1 gene forserine protease (AJ428902) related proteinchromosome CDS2172444 558 + 0.501792
NA Bd3195 Hxdroxypyruvate reductasechromosome CDS3118145 960 + 0.5375
NA Bd1792 hypothetical protein predicted by Glimmer/Criticachromosome CDS1719699 396 - 0.472222
NA Bd0284 hypothetical protein predicted by Glimmer/Criticachromosome CDS270170 537 + 0.465549
NA Bd1626 Isopentenyl-diphosphate delta-isomerasechromosome CDS1562989 1044 + 0.517241
ace Bd0394 pyruvate dehydrogenase E1 componentchromosome CDS369350 2817 - 0.511537
acnA Bd3178 aconitate hydratase 1chromosome CDS3097115 2685 - 0.537803
adhC Bd0898 alcohol dehydrogenase / formaldehyde dehydrogenasechromosome CDS850834 1110 + 0.527928
aldH Bd2266 aldehyde dehydrogenasechromosome CDS2163791 1404 + 0.496439
astD Bd0131 succinylglutamic semialdehyde dehydrogenasechromosome CDS115301 1518 + 0.513175
atpA Bd3899 ATP synthase F1, alpha subunitchromosome CDS3769796 1524 - 0.476378
atpB Bd0009 ATP synthase F0, A subunitchromosome CDS10271 690 + 0.481159
atpB Bd3897 ATP synthase beta chainchromosome CDS3767478 1407 - 0.491116
atpC Bd3896 ATP synthase epsilon subunitchromosome CDS3767035 423 - 0.477541
atpD Bd3900 ATP synthase, delta (OSCP) subunit, ATP synthase, delta (OSCP) subunit,chromosome CDS3771322 549 - 0.455373
atpE/H Bd0010 ATP synthase subunit Cchromosome CDS10993 318 + 0.455975
atpF Bd3903 ATP synthase B chainchromosome CDS3772443 435 - 0.452874
atpF Bd3902 ATP synthase B chainchromosome CDS3771875 561 - 0.467023
atpG Bd3898 ATP synthase gamma chainchromosome CDS3768896 888 - 0.44482
cit Bd2511 chromosome CDS2416989 1167 + 0.477292
citZ Bd0562 chromosome CDS520456 1140 + 0.492982
ctaC Bd0286 cytochrome c oxidase, subunit IIchromosome CDS271607 957 + 0.470219
ctaD Bd0287 cytochrome c oxidase subunit Ichromosome CDS272574 1608 + 0.491915
ctaE Bd0288 cytochrome c oxidase subunit IIIchromosome CDS274168 666 + 0.489489
dsbD Bd3255 thiol:disulfide interchange proteinchromosome CDS3172290 1962 + 0.512742
etf-QO Bd0945 electron transfer flavoprotein-ubiquinone oxidoreductasechromosome CDS892813 1737 + 0.508923
etfA Bd0021 Electron transfer flavoprotein alpha-subunitchromosome CDS19818 969 - 0.514964
etfB Bd0022 electron transfer flavoprotein beta-subunitchromosome CDS20797 774 - 0.483204
fdx Bd3833 chromosome CDS3701109 330 - 0.536364
fer Bd0590 putative ferredoxinchromosome CDS548504 234 + 0.525641
fixN Bd2611 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS2528455 2121 + 0.518623
fixP Bd2613 cytochrome-c oxidase fixP chainchromosome CDS2530738 558 + 0.546595
fumB Bd2151 fumarate hydratase, class Ichromosome CDS2055471 1836 - 0.525054
gabD Bd1926 succinate-semialdehyde dehydrogenase (NADP+)chromosome CDS1837827 1350 + 0.50963
glpD Bd0208 chromosome CDS193302 1635 + 0.518043
glpK Bd2718 chromosome CDS2639102 1488 - 0.522849
glpQ Bd1385 putative phosphodiesterasechromosome CDS1311481 669 + 0.544096
hemG Bd2899 protoporphyrinogen oxidasechromosome CDS2809530 564 + 0.466312
hmoA Bd1608 molybdopterin oxidoreductase, iron-sulfur binding subunitchromosome CDS1538350 3102 + 0.498711
icdA Bd3723 isocitrate dehydrogenase (NADP)chromosome CDS3598277 1230 + 0.473984
leuB Bd1264 3-isopropylmalate dehydrogenasechromosome CDS1198682 1002 - 0.528942
leuC Bd2784 3-isopropylmalate isomerasechromosome CDS2695715 2259 - 0.506419
lpdA Bd2731 dihydrolipoamide dehydrogenasechromosome CDS2654510 1410 + 0.514184
mdh Bd0928 malate dehydrogenasechromosome CDS880633 1080 + 0.489815
mdh Bd1833 malate dehydrogenasechromosome CDS1758895 1974 - 0.535968
mmsA Bd1534 Methylmalonate-semialdehyde dehydrogenasechromosome CDS1455773 1476 - 0.52981
ndh Bd0332 NADH dehydrogenasechromosome CDS315499 1290 - 0.505426
nhaC Bd0259 chromosome CDS247795 1284 + 0.535826
norC Bd2601 nitric oxide reductase, cytochrome c-containing subunitchromosome CDS2520496 648 - 0.554012
nrfH Bd2824 cytochrome c-type proteinchromosome CDS2729208 456 + 0.506579
nuoA Bd3892 NADH dehydrogenase I chain Achromosome CDS3760259 384 - 0.434896
nuoB Bd3086 NADH dehydrogenase I chain Bchromosome CDS2994984 564 - 0.515957
nuoD Bd3085 NADH dehydrogenase I,D subunitchromosome CDS2993315 1683 - 0.507427
nuoE Bd3084 NADH dehydrogenase I chain Echromosome CDS2992830 480 - 0.483333
nuoF Bd3083 NADH dehydrogenase I, F subunitchromosome CDS2991538 1293 - 0.501934
nuoG Bd3081 NADH dehydrogenase I chain Gchromosome CDS2989977 1515 - 0.504951
nuoH Bd3891 NADH dehydrogenase I chain Hchromosome CDS3759098 1158 - 0.519862
nuoI Bd3080 NADH dehydrogenase I chain Ichromosome CDS2989456 525 - 0.500952
nuoJ Bd3890 NADH dehydrogenase I chain Jchromosome CDS3758552 537 - 0.500931
nuoK Bd3889 NADH-ubiquinone oxidoreductase chain 4L (chain K)chromosome CDS3758239 324 - 0.462963
nuoL Bd3888 NADH dehydrogenase I chain Lchromosome CDS3756297 1932 - 0.506729
nuoM Bd3887 NADH dehydrogenase I chain Mchromosome CDS3754740 1554 - 0.497426
nuoN Bd3886 NADH dehydrogenase I chain Nchromosome CDS3753280 1461 - 0.505133
pdhC Bd0779 pyruvate dehydrogenase E2chromosome CDS734959 1632 - 0.528799
pdhD Bd0778 dihydrolipoamide dehydrogenase, E3 subunitchromosome CDS733471 1422 - 0.498594
ppa Bd1715 vacuolar-type H+-pyrophosphatasechromosome CDS1651395 2067 + 0.521045
ppc Bd0608 chromosome CDS567575 2466 - 0.534063
putA Bd1251 1-pyrroline-5 carboxylate dehydrogenasechromosome CDS1186701 2949 - 0.516107
qor Bd0305 quinone oxidoreductasechromosome CDS294495 981 + 0.552497
resA Bd2948 thiol:disulfide interchange protein tlpAchromosome CDS2858909 594 - 0.516835
resA Bd1980 cytochrome c biogenesis (thioredoxin)chromosome CDS1891113 510 + 0.511765
resA Bd2208 cytochrome c biogenesis (thioredoxin) related proteinchromosome CDS2106871 492 + 0.485772
sdhA Bd0025 putative succinate dehydrogenase flavoprotein subunitchromosome CDS22422 1917 + 0.529995
sdhB Bd0026 succinate dehydrogenase subunit Bchromosome CDS24349 789 + 0.528517
sdhC Bd0024 putative cytochrome B subunitchromosome CDS21751 660 + 0.5
sfcA Bd2834 NAD-dependent malic enzymechromosome CDS2741527 1698 - 0.542992
sucA Bd2728 oxoglutarate dehydrogenasechromosome CDS2650521 2706 + 0.510717
sucB Bd2729 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferasechromosome CDS2653248 1260 + 0.52619
sucC Bd3810 succinyl-CoA synthetase beta chainchromosome CDS3675791 1164 + 0.481959
sucD Bd3811 succinyl-CoA synthetase alpha chainchromosome CDS3676961 873 + 0.501718
trx Bd0175 thioredoxinchromosome CDS163152 351 + 0.48433
trx Bd2468 thioredoxinchromosome CDS2372268 327 - 0.480122
ugpQ Bd2817 chromosome CDS2724867 939 + 0.542066
yjeS Bd1819 iron-sulfur cluster-binding proteinchromosome CDS1746181 1050 - 0.519048
yvbT Bd2074 lkanal monooxygenase homolog yvbTchromosome CDS1980091 1011 + 0.541048