Gene list
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COG category: Energy production and conversion
Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
Number of genes found: 91
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| Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | PMM1229 | Dehydrogenase, E1 component | SubName: Full=Dehydrogenase, E1 component; EC=1.2.4.1; | chromosome | CDS | 1181148 | 975 | + | 0.308718 |
| NA | PMM0082 | putative NADH dehydrogenase, transport associated | SubName: Full=Putative NADH dehydrogenase, transport associated; EC=1.6.99.3; Flags: Precursor; | chromosome | CDS | 86776 | 1185 | + | 0.291139 |
| NA | PMM0520 | NAD binding site | SubName: Full=NAD binding site; | chromosome | CDS | 491753 | 1134 | - | 0.343034 |
| NA | PMM1230 | dehydrogenase E1 component beta subunit | SubName: Full=Dehydrogenase E1 component beta subunit; | chromosome | CDS | 1182125 | 930 | + | 0.284946 |
| NA | PMM0007 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 9275 | 945 | - | 0.308995 |
| NA | PMM0554 | putative carboxysome peptide A | SubName: Full=Putative carboxysome peptide A; | chromosome | CDS | 524862 | 267 | + | 0.40824 |
| NA | PMM0366 | Type-1 copper (blue) domain | SubName: Full=Type-1 copper (Blue) domain; Flags: Precursor; | chromosome | CDS | 348223 | 405 | + | 0.380247 |
| NA | PMM1206 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1154292 | 1392 | - | 0.270115 |
| NA | PMM0741 | conserved hypothetical protein | RecName: Full=Protein Thf1; | chromosome | CDS | 702603 | 654 | - | 0.262997 |
| NA | PMM1477 | conserved hypothetical | SubName: Full=Conserved hypothetical; | chromosome | CDS | 1410596 | 366 | - | 0.344262 |
| NA | PMM0331 | Putative aldehyde dehydrogenase | RecName: Full=Aldehyde dehydrogenase; | chromosome | CDS | 320182 | 1392 | - | 0.280891 |
| NA | PMM1560 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1488368 | 1011 | + | 0.329377 |
| NA | PMM1234 | Zinc-containing alcohol dehydrogenase superfamily | SubName: Full=Zinc-containing alcohol dehydrogenase superfamily; | chromosome | CDS | 1186069 | 1032 | + | 0.334302 |
| NA | PMM0500 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 474834 | 531 | - | 0.306968 |
| NA | PMM1498 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1437023 | 1620 | + | 0.328395 |
| NA | PMM0101 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 104981 | 936 | - | 0.300214 |
| NA | PMM0555 | putative carboxysome peptide B | SubName: Full=Putative carboxysome peptide B; | chromosome | CDS | 525161 | 222 | + | 0.396396 |
| NA | PMM0283 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 272674 | 594 | + | 0.304714 |
| NA | PMM1480 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1411678 | 771 | - | 0.328145 |
| NA | PMM1143 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1096003 | 330 | + | 0.290909 |
| NA | PMM1303 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1255497 | 1356 | - | 0.322271 |
| NA | PMM1161 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1112317 | 252 | + | 0.349206 |
| NA | PMM0052 | Aldo/keto reductase family | SubName: Full=Aldo/keto reductase family; | chromosome | CDS | 55066 | 963 | + | 0.292835 |
| NA | PMM0645 | FAD linked oxidase, N-terminal | SubName: Full=FAD linked oxidase, N-terminal; | chromosome | CDS | 614798 | 1278 | - | 0.309077 |
| NA | PMM0316 | possible ferredoxin | SubName: Full=Possible ferredoxin; | chromosome | CDS | 302812 | 363 | + | 0.38292 |
| NA | PMM0127 | possible Signal peptide binding domain | SubName: Full=Possible Signal peptide binding domain; | chromosome | CDS | 124573 | 360 | - | 0.277778 |
| NA | PMM1455 | H+-transporting ATP synthase c subunit | RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase F(0) sector subunit c; AltName: Full=F-type ATPase subunit c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding protein; | chromosome | CDS | 1390194 | 246 | - | 0.451219 |
| NA | PMM0098 | possible Fe-S oxidoreductase | SubName: Full=Possible Fe-S oxidoreductase; | chromosome | CDS | 100958 | 1413 | - | 0.295824 |
| acnB | PMM1700 | Aconitate hydratase B | RecName: Full=Aconitate hydratase 2; EC=4.2.1.3; EC=4.2.1.99; AltName: Full=2-methylisocitrate dehydratase; | chromosome | CDS | 1635543 | 2574 | + | 0.350816 |
| atpA | PMM1451 | H+-transporting ATP synthase alpha-subunit | RecName: Full=ATP synthase subunit alpha; EC=3.6.3.14; AltName: Full=ATP synthase F1 sector subunit alpha; AltName: Full=F-ATPase subunit alpha; | chromosome | CDS | 1387064 | 1518 | - | 0.38274 |
| atpB | PMM1438 | H+-transporting ATP synthase beta subunit | RecName: Full=ATP synthase subunit beta; EC=3.6.3.14; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta; | chromosome | CDS | 1375858 | 1461 | + | 0.407255 |
| atpC | PMM1450 | ATP synthase gamma subunit | RecName: Full=ATP synthase gamma chain; AltName: Full=ATP synthase F1 sector gamma subunit; AltName: Full=F-ATPase gamma subunit; | chromosome | CDS | 1386093 | 951 | - | 0.352261 |
| atpC,atpE | PMM1439 | ATP synthase, Epsilon subunit | RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP synthase F1 sector epsilon subunit; AltName: Full=F-ATPase epsilon subunit; | chromosome | CDS | 1377367 | 405 | + | 0.365432 |
| atpF | PMM1453 | ATP synthase B/B' CF(0) | RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName: Full=F-type ATPase subunit b; Short=F-ATPase subunit b; | chromosome | CDS | 1389155 | 513 | - | 0.333333 |
| atpG | PMM1454 | ATP synthase B/B' CF(0) | RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase F(0) sector subunit b; AltName: Full=ATPase subunit II; AltName: Full=F-type ATPase subunit b; Short=F-ATPase subunit b; | chromosome | CDS | 1389664 | 462 | - | 0.341991 |
| atpH,atpD | PMM1452 | ATP synthase, delta (OSCP) subunit | RecName: Full=ATP synthase subunit delta; AltName: Full=ATP synthase F(1) sector subunit delta; AltName: Full=F-type ATPase subunit delta; Short=F-ATPase subunit delta; | chromosome | CDS | 1388613 | 543 | - | 0.3186 |
| atpI | PMM1456 | ATP synthase A subunit | RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase F0 sector subunit a; AltName: Full=F-ATPase subunit 6; | chromosome | CDS | 1390606 | 726 | - | 0.344353 |
| chlB | PMM0544 | Light-independent protochlorophyllide reductase subunit B | RecName: Full=Light-independent protochlorophyllide reductase subunit B; Short=DPOR subunit B; Short=LI-POR subunit B; EC=1.3.7.7; | chromosome | CDS | 513553 | 1581 | - | 0.368754 |
| chlN | PMM0545 | Light-independent protochlorophyllide reductase subunit N | RecName: Full=Light-independent protochlorophyllide reductase subunit N; Short=DPOR subunit N; Short=LI-POR subunit N; EC=1.3.7.7; | chromosome | CDS | 515137 | 1257 | - | 0.385044 |
| chlP | PMM0760 | Aromatic-ring hydroxylase (flavoprotein monooxygenase) | SubName: Full=Aromatic-ring hydroxylase (Flavoprotein monooxygenase); Flags: Precursor; | chromosome | CDS | 723227 | 1332 | - | 0.349099 |
| crtL1 | PMM1064 | putative lycopene beta cyclase | SubName: Full=Putative lycopene beta cyclase; | chromosome | CDS | 1004827 | 1212 | + | 0.325908 |
| crtL2 | PMM0633 | putative lycopene epsilon cyclase | SubName: Full=Putative lycopene epsilon cyclase; Flags: Precursor; | chromosome | CDS | 601515 | 1284 | - | 0.348131 |
| csoS1 | PMM0549 | carboxysome shell protein CsoS1 | RecName: Full=Carbon dioxide-concentrating mechanism protein CcmK; AltName: Full=Carboxysome shell protein CsoS1; | chromosome | CDS | 518725 | 297 | + | 0.50505 |
| ctaC (coxB) | PMM0446 | putative cytochrome c oxidase, subunit 2 | RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; Flags: Precursor; | chromosome | CDS | 425114 | 804 | - | 0.319652 |
| ctaD (coxA) | PMM0445 | Cytochrome c oxidase, subunit I | SubName: Full=Cytochrome c oxidase, subunit I; EC=1.9.3.1; | chromosome | CDS | 423492 | 1626 | - | 0.366544 |
| ctaE | PMM0444 | Cytochrome c oxidase, subunit III | SubName: Full=Cytochrome c oxidase, subunit III; EC=1.9.3.1; | chromosome | CDS | 422877 | 603 | - | 0.310116 |
| cytM | PMM1057 | cytochrome cM | SubName: Full=Cytochrome cM; Flags: Precursor; | chromosome | CDS | 998550 | 405 | - | 0.311111 |
| fumC | PMM1466 | Fumarate lyase | RecName: Full=Fumarate hydratase class II; Short=Fumarase C; EC=4.2.1.2; | chromosome | CDS | 1399018 | 1386 | + | 0.318182 |
| gldA | PMM1087 | putative glycerol dehydrogenase | SubName: Full=Putative glycerol dehydrogenase; EC=1.1.1.6; | chromosome | CDS | 1030915 | 1095 | - | 0.311416 |
| gltA | PMM0161 | Citrate synthase | RecName: Full=Citrate synthase; | chromosome | CDS | 156307 | 1146 | - | 0.369983 |
| gshR | PMM0567 | probable glutathione reductase (NADPH) | SubName: Full=Probable glutathione reductase (NADPH); EC=1.8.1.7; | chromosome | CDS | 534377 | 1380 | + | 0.30942 |
| icd | PMM1596 | Isocitrate dehydrogenase | RecName: Full=Isocitrate dehydrogenase [NADP]; EC=1.1.1.42; | chromosome | CDS | 1524255 | 1425 | + | 0.345263 |
| isiB | PMM1171 | Flavodoxin | RecName: Full=Flavodoxin; | chromosome | CDS | 1121029 | 525 | - | 0.382857 |
| kaiB | PMM1343 | possible circadian oscillation regulator KaiB | RecName: Full=Circadian clock protein KaiB; | chromosome | CDS | 1295572 | 324 | - | 0.311728 |
| leuB | PMM0786 | 3-isopropylmalate dehydrogenase | RecName: Full=3-isopropylmalate dehydrogenase; EC=1.1.1.85; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH; | chromosome | CDS | 747739 | 1074 | - | 0.324022 |
| lpdA | PMM1298 | putative dihydrolipoamide dehydrogenase | RecName: Full=Dihydrolipoyl dehydrogenase; EC=1.8.1.4; | chromosome | CDS | 1248616 | 1440 | - | 0.365278 |
| ndhA | PMM0160 | putative respiratory-chain NADH dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit 1; AltName: Full=NDH-1 subunit 1; AltName: Full=NDH-A; | chromosome | CDS | 155113 | 1119 | - | 0.357462 |
| ndhB | PMM0435 | putative NADH dehydrogenase (complex I) subunit (chain 2) | RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase subunit 2; AltName: Full=NADH-plastoquinone oxidoreductase subunit 2; AltName: Full=NDH-1, subunit 2; | chromosome | CDS | 412795 | 1521 | - | 0.357659 |
| ndhC | PMM0294 | putative NADH Dehydrogenase (complex I) subunit (chain 3) | RecName: Full=NAD(P)H-quinone oxidoreductase subunit 3; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase subunit 3; AltName: Full=NADH-plastoquinone oxidoreductase subunit 3; AltName: Full=NDH-1 subunit 3; Short=NDH-C; | chromosome | CDS | 283764 | 363 | - | 0.363636 |
| ndhD | PMM0594 | putative NADH Dehydrogenase (complex I) subunit (chain 4) | SubName: Full=Putative NADH Dehydrogenase (Complex I) subunit (Chain 4); EC=1.6.5.3; | chromosome | CDS | 562568 | 1485 | - | 0.356902 |
| ndhD | PMM0150 | putative NADH dehydrogenase subunit (chain 4) | RecName: Full=NAD(P)H-quinone oxidoreductase chain 4; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I, chain 4; AltName: Full=NDH-1, chain 4; | chromosome | CDS | 146813 | 1641 | + | 0.347959 |
| ndhE | PMM0157 | putative NADH Dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit 4L; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase subunit 4L; AltName: Full=NADH-plastoquinone oxidoreductase subunit 4L; AltName: Full=NDH-1, subunit 4L; AltName: Full=NDH-E; | chromosome | CDS | 153482 | 321 | - | 0.314642 |
| ndhF | PMM0149 | putative NADH Dehydrogenase (complex I) subunit (chain 5) | SubName: Full=Putative NADH Dehydrogenase (Complex I) subunit (Chain 5); EC=1.6.5.3; | chromosome | CDS | 144716 | 2013 | + | 0.359662 |
| ndhG | PMM0158 | putative NADH Dehydrogenase (complex I) subunit (chain 6) | SubName: Full=Putative NADH Dehydrogenase (Complex I) subunit (Chain 6); EC=1.6.5.3; Flags: Precursor; | chromosome | CDS | 153804 | 600 | - | 0.32 |
| ndhH | PMM0172 | putative NADH dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit H; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase subunit H; AltName: Full=NADH-plastoquinone oxidoreductase subunit H; AltName: Full=NDH-1 subunit H; Short=NDH-H; | chromosome | CDS | 165925 | 1188 | + | 0.356061 |
| ndhI | PMM0159 | putative NADH Dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit I; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; Short=NDH-I; | chromosome | CDS | 154417 | 627 | - | 0.339713 |
| ndhJ | PMM0292 | putative respiratory-chain NADH dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit J; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase subunit J; AltName: Full=NADH-plastoquinone oxidoreductase subunit J; AltName: Full=NDH-1 subunit J; Short=NDH-J; | chromosome | CDS | 282495 | 531 | - | 0.33145 |
| ndhK | PMM0293 | putative respiratory-chain NADH dehydrogenase subunit | RecName: Full=NAD(P)H-quinone oxidoreductase subunit K; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit K; AltName: Full=NDH-1 subunit K; Short=NDH-K; | chromosome | CDS | 283025 | 735 | - | 0.34966 |
| pdhA | PMM1288 | Pyruvate dehydrogenase E1 alpha subunit | RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha; EC=1.2.4.1; | chromosome | CDS | 1239069 | 1038 | + | 0.378613 |
| pdhB | PMM0930 | Pyruvate dehydrogenase E1 beta subunit | SubName: Full=Pyruvate dehydrogenase E1 beta subunit; EC=1.2.4.1; | chromosome | CDS | 890595 | 984 | - | 0.335366 |
| pdhC | PMM0405 | Dihydrolipoamide acetyltransferase component (E2) of pyruvate de | SubName: Full=Dihydrolipoamide acetyltransferase component (E2) of pyruvate de; EC=2.3.1.12; | chromosome | CDS | 383670 | 1368 | + | 0.361111 |
| petB | PMM0325 | Cytochrome b6 | RecName: Full=Cytochrome b6; | chromosome | CDS | 309806 | 657 | + | 0.362253 |
| petC | PMM0462 | Rieske iron-sulfur protein | RecName: Full=Cytochrome b6-f complex iron-sulfur subunit; EC=1.10.9.1; AltName: Full=Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Short=ISP; Short=RISP; AltName: Full=Rieske iron-sulfur protein; | chromosome | CDS | 440775 | 537 | - | 0.420857 |
| petD | PMM0326 | PetD protein (subunit IV of the Cytochrome b6f complex) | RecName: Full=Cytochrome b6-f complex subunit 4; AltName: Full=17 kDa polypeptide; | chromosome | CDS | 310505 | 483 | + | 0.347826 |
| petE | PMM0581 | plastocyanin | SubName: Full=Plastocyanin; Flags: Precursor; | chromosome | CDS | 546477 | 351 | - | 0.378917 |
| petF | PMM1449 | ferredoxin | SubName: Full=Ferredoxin; | chromosome | CDS | 1385752 | 327 | - | 0.318043 |
| petF | PMM1352 | ferredoxin | SubName: Full=Ferredoxin; | chromosome | CDS | 1301798 | 300 | - | 0.376667 |
| petF | PMM0898 | ferredoxin, petF-like protein | SubName: Full=Ferredoxin, petF-like protein; | chromosome | CDS | 861281 | 375 | + | 0.322667 |
| pntA-1 | PMM1147 | putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1) | SubName: Full=Putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1); EC=1.6.1.2; | chromosome | CDS | 1099193 | 1131 | - | 0.365164 |
| pntA-2 | PMM1146 | putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) | SubName: Full=Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2); EC=1.6.1.2; | chromosome | CDS | 1098881 | 297 | - | 0.343434 |
| pntB | PMM1145 | putative nicotinamide nucleotide transhydrogenase, subunit beta | RecName: Full=NAD(P) transhydrogenase subunit beta; EC=1.6.1.2; AltName: Full=Nicotinamide nucleotide transhydrogenase subunit beta; | chromosome | CDS | 1097431 | 1437 | - | 0.382742 |
| ppa (ipyR) | PMM0511 | Inorganic pyrophosphatase | RecName: Full=Inorganic pyrophosphatase; EC=3.6.1.1; AltName: Full=Pyrophosphate phospho-hydrolase; | chromosome | CDS | 482722 | 549 | + | 0.338798 |
| ppa (ipyR) | PMM0494 | putative inorganic pyrophosphatase | SubName: Full=Putative inorganic pyrophosphatase; EC=3.6.1.1; | chromosome | CDS | 467424 | 588 | + | 0.333333 |
| ppc | PMM1575 | Phosphoenolpyruvate carboxylase | RecName: Full=Phosphoenolpyruvate carboxylase; Short=PEPC; Short=PEPCase; EC=4.1.1.31; | chromosome | CDS | 1502738 | 2970 | - | 0.334007 |
| prk, cbbP | PMM0785 | phosphoribulokinase | RecName: Full=Phosphoribulokinase; EC=2.7.1.19; | chromosome | CDS | 746750 | 900 | - | 0.363333 |
| psaC | PMM1607 | Photosystem I subunit PsaC | RecName: Full=Photosystem I iron-sulfur center; EC=1.97.1.12; AltName: Full=9 kDa polypeptide; AltName: Full=PSI-C; AltName: Full=Photosystem I subunit VII; AltName: Full=PsaC; | chromosome | CDS | 1537828 | 246 | - | 0.422764 |
| rbcS, cbbS | PMM0551 | Ribulose bisphosphate carboxylase, small chain | SubName: Full=Ribulose bisphosphate carboxylase, small chain; EC=4.1.1.39; | chromosome | CDS | 520592 | 342 | + | 0.409357 |
| rub | PMM0295 | probable rubredoxin | SubName: Full=Probable rubredoxin; | chromosome | CDS | 284199 | 429 | + | 0.319347 |
| trxA | PMM1061 | Thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 1000324 | 324 | - | 0.385802 |
| txlA | PMM0242 | thioredoxin-like protein TxlA | SubName: Full=Thioredoxin-like protein TxlA; Flags: Precursor; | chromosome | CDS | 236138 | 546 | + | 0.261905 |
| ubiH | PMM0834 | possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiH | SubName: Full=Possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH; EC=1.14.13.-; | chromosome | CDS | 791807 | 1155 | + | 0.249351 |
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