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2024-04-29 06:32:45

Gene list

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COG category: Energy production and conversion
Organism: Bordetella pertussis, Tohama I

Number of genes found: 231

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Bordetella pertussis, Tohama I
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BP0628 putative pyruvate dehydrogenase E1 beta subunitchromosome CDS635643 975 - 0.702564
NA BP2780 putative malate dehydrogenasechromosome CDS2954659 1113 - 0.714286
NA BP2500 putative thioredoxinchromosome CDS2649875 381 - 0.685039
NA BP0592 putative iron-sulfur binding proteinchromosome CDS597898 1188 + 0.700337
NA BP0901 putative oxidoreductasechromosome CDS936880 981 + 0.688073
NA BP3712 putative oxidoreductasechromosome CDS3920371 945 - 0.744974
NA BP2403 putative electron transfer flavoprotein-ubiquinone oxidoreductasechromosome CDS2542965 1629 + 0.660528
NA BP0465 probable aldehyde dehydrogenasechromosome CDS475532 1434 + 0.706416
NA BP3744 putative bifunctional proteinchromosome CDS3950902 1179 - 0.634436
NA BP0977 probable oxidoreductasechromosome CDS1015610 1050 + 0.667619
NA BP3650 putative cytochrome C precursorchromosome CDS3853503 702 + 0.659544
NA BP0429 delta-1-pyrroline-5-carboxylate dehydrogenase precursorchromosome CDS430105 1641 - 0.69287
NA BP2703 hypothetical proteinchromosome CDS2869024 585 - 0.688889
NA BP2864 putative alcohol dehydrogenasechromosome CDS3042187 1011 + 0.666667
NA BP2417 putative oxidoreductasechromosome CDS2558638 1467 - 0.675528
NA BP1036 putative aldo/keto reductasechromosome CDS1078494 1050 + 0.724762
NA BP0431 putative molybdopterin oxidoreductasechromosome CDS433236 3387 - 0.709477
NA BP3361 phage-related hypothetical proteinchromosome CDS3577204 417 - 0.589928
NA BP2906 putative oxidoreductasechromosome CDS3084263 1410 - 0.673759
NA BP0262 probable ATP-binding component of ABC transporterchromosome CDS270796 1752 + 0.744292
NA BP1729 putative pyridine nucleotide-disulfide oxidoreductasechromosome CDS1812146 1416 + 0.718927
NA BP2974 putative integral membrane proteinchromosome CDS3160011 1497 - 0.694055
NA BP2031 putative acyl-CoA transferasechromosome CDS2144077 1533 + 0.677104
NA BP3581 putative ferredoxin--NADP reductasechromosome CDS3794709 798 - 0.684211
NA BP2170 probable cytochrome C oxidase subunitchromosome CDS2291835 663 + 0.696833
NA BP0199 conserved hypothetical proteinchromosome CDS202837 1212 + 0.70297
NA BP0777 probable Zinc-binding dehydrogenasechromosome CDS798657 1008 - 0.668651
NA BP0684A probable 2Fe-2S ferredoxinchromosome CDS700479 510 + 0.666667
NA BP3500 putative dehydrogenasechromosome CDS3710545 1710 - 0.65731
NA BP1779 conserved hypothetical proteinchromosome CDS1870627 1224 + 0.66585
NA BP1353 conserved hypothetical proteinchromosome CDS1428275 1194 + 0.710218
NA BP3708 putative zinc-binding dehydrogenasechromosome CDS3916300 1005 - 0.719403
NA BP2888 putative integral membrane proteinchromosome CDS3064168 696 + 0.70546
NA BP3224 putative cytochrome oxidasechromosome CDS3435945 1056 - 0.689394
NA BP2728 cytochrome ubiquinol oxidase subunit IVchromosome CDS2894366 408 - 0.617647
NA BP2648 conserved hypothetical proteinchromosome CDS2806155 1383 - 0.675343
NA BP2941 putative racemasechromosome CDS3129537 1191 - 0.732997
NA BP3582 ferredoxinchromosome CDS3795552 324 - 0.570988
NA BP1933 putative pimeloyl-CoA synthetasechromosome CDS2035484 2121 - 0.718529
NA BP0884 probable carboxylasechromosome CDS921771 1455 + 0.667354
NA BP0591 oxidoreductase, medium chainchromosome CDS597065 837 + 0.726404
NA BP0824 azurinchromosome CDS852309 453 + 0.629139
NA BP1615 probable probable aldehyde dehydrogenasechromosome CDS1697854 1527 + 0.696136
NA BP3849 conserved hypothetical proteinchromosome CDS4059033 1263 + 0.66825
NA BP2730 cytochrome ubiquinol oxidase subunit Ichromosome CDS2895404 2001 - 0.646177
NA BP0066 oxidoreductasechromosome CDS64489 1062 - 0.511299
NA BP3841 CAIB/BAIF family proteinchromosome CDS4051070 1155 + 0.637229
NA BP2173 putative ferredoxinchromosome CDS2293703 1491 + 0.686787
NA BP3394 conserved hypothetical proteinchromosome CDS3603308 447 + 0.666667
NA BP3188 conserved hypothetical proteinchromosome CDS3400137 1095 - 0.73242
NA BP0920 putative exported proteinchromosome CDS956606 1404 - 0.683048
NA BP0353 putative ferredoxinchromosome CDS353832 306 + 0.624183
NA BP2126 putative oxidoreductase subunitchromosome CDS2250306 459 + 0.712418
NA BP1241 conserved hypothetical proteinchromosome CDS1303027 606 - 0.678218
NA BP3709 putative racemasechromosome CDS3917301 1194 - 0.698492
NA BP2096 putative fatty-acyl-CoA racemasechromosome CDS2217189 1149 + 0.732811
NA BP1470 putative iron-sulfur binding proteinchromosome CDS1545397 2091 + 0.697274
NA BP3579 putative ferredoxinchromosome CDS3792643 642 - 0.738318
NA BP3624 putative aldehyde dehydrogenasechromosome CDS3836362 1428 - 0.662465
NA BP1350 putative acetyl-CoA synthetasechromosome CDS1424410 2040 + 0.708333
NA BP2999 thioredoxinchromosome CDS3190094 570 - 0.64386
NA BP1560 conserved hypothetical proteinchromosome CDS1637931 1413 - 0.697098
NA BP0358 putative membrane proteinchromosome CDS357934 1509 + 0.699139
NA BP0685 probable dehydrogenase/oxidasechromosome CDS700981 2382 + 0.701092
NA BP0673 conserved hypothetical proteinchromosome CDS687358 798 + 0.697995
NA BP1954 putative monooxygenasechromosome CDS2058433 1152 - 0.677951
NA BP0659 probable zinc-binding dehydrogenasechromosome CDS667480 984 + 0.692073
NA BP2336 conserved hypothetical proteinchromosome CDS2475300 273 + 0.6337
NA BP1953 probable oxidoreductasechromosome CDS2057835 522 - 0.706897
NA BP1931 probable NADH-dependent flavin oxidoreductasechromosome CDS2033584 1029 - 0.724004
NA BP2977 conserved hypothetical proteinchromosome CDS3163524 2460 - 0.726016
NA BP2820 putative alcohol dehydrogenasechromosome CDS2997900 1155 + 0.711688
NA BP2172 putative cytochrome C oxidase subunitchromosome CDS2292673 939 + 0.675186
NA BP3543 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS3755134 954 - 0.685535
NA BP2291 tartrate dehydrogenasechromosome CDS2412189 1068 - 0.670412
NA BP0692 cytochrome Cchromosome CDS708029 1287 + 0.72805
NA BP2490 putative cytochromechromosome CDS2638372 363 - 0.683196
NA BP1580 probable cytochrome Cchromosome CDS1658823 714 - 0.743697
NA BP0360 probable aldehyde dehydrogenasechromosome CDS360338 1461 + 0.680356
NA BP1155 putative regulatory proteinchromosome CDS1219994 1380 + 0.684058
NA BP1579 putative cytochrome Cchromosome CDS1657909 918 - 0.698257
NA BP2127 putative exported oxidoreductase subunitchromosome CDS2250778 2217 + 0.745151
NA BP3504 conserved hypothetical proteinchromosome CDS3714933 1746 + 0.642612
NA BP2491 putative cytochromechromosome CDS2638747 336 - 0.64881
NA BP0642 conserved hypothetical proteinchromosome CDS648966 1149 + 0.710183
NA BP0351 putative ferredoxinchromosome CDS353195 318 + 0.632075
NA BP3225 putative transmembrane cytochrome oxidasechromosome CDS3436997 1341 - 0.709918
NA BP0208 putative oxidoreductasechromosome CDS213269 1413 - 0.69356
NA BP0207 putative aldehyde dehydrogenasechromosome CDS211726 1431 - 0.696017
NA BP0362 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS362321 1011 + 0.69634
NA BP1305 conserved hypothetical proteinchromosome CDS1374130 1449 + 0.713596
NA BP3139 putative oxidoreductasechromosome CDS3345932 1416 - 0.694915
NA BP3131 putative oxygenasechromosome CDS3335997 1680 + 0.704762
NA BP0143 conserved hypothetical proteinchromosome CDS143667 1224 - 0.673203
NA BP3413 putative monooxygenasechromosome CDS3621406 1182 + 0.745347
NA BP0416 conserved hypothetical proteinchromosome CDS416616 1233 + 0.697486
NA BP0800 probable zinc-binding dehydrogenasechromosome CDS823197 978 + 0.702454
NA BP1513 formate dehydrogenasechromosome CDS1589041 1191 - 0.708648
NA BP2644 putative glycerol-3-phosphate dehydrogenasechromosome CDS2801839 1605 + 0.723988
NA BP0253 conserved hypothetical proteinchromosome CDS262883 1125 - 0.735111
NA BP3845 nitroreductase family proteinchromosome CDS4055517 735 + 0.67619
NA BP2303 putative aldehyde dehydrogenasechromosome CDS2426476 1494 + 0.69411
NA BP2521 putative dehydrogenasechromosome CDS2671161 1029 + 0.642371
NA BP3714 putative zinc-binding dehydrogenaseschromosome CDS3922613 846 - 0.751773
NA BP0141 probable iron-sulfur binding oxidasechromosome CDS138845 3900 + 0.675128
NA BP2729 cytochrome ubiquinol oxidase subunit IIIchromosome CDS2894770 642 - 0.67757
NA BP0435 putative dehydratase/racemasechromosome CDS439312 1233 - 0.715328
NA BP0675 probable molybdopterin oxidoreductasechromosome CDS689008 2376 + 0.681397
NA BP0386 putative thioredoxinchromosome CDS387082 492 - 0.621951
NA BP2009 putative cytochrome cchromosome CDS2120532 411 + 0.768856
NA BP0661 putative acetyl-CoA synthetasechromosome CDS669639 2142 - 0.695145
NA BP1643 putative exported proteinchromosome CDS1730681 969 + 0.688339
NA BP1195 ferredoxinchromosome CDS1255669 342 + 0.719298
NA BP0438 conserved hypothetical proteinchromosome CDS442110 1254 - 0.689793
NA BP2889 putative c'cytochromechromosome CDS3064948 459 - 0.660131
NA BP0672 acetyl-CoA synthetasechromosome CDS685172 2190 + 0.687215
NA BP3646 thiol:disulfide interchange proteinchromosome CDS3848631 1938 + 0.704334
NA BP2678 putative oxidoreductasechromosome CDS2843095 1653 - 0.703569
NA BP1352 conserved hypothetical proteinchromosome CDS1427481 798 + 0.711779
NA BP2559 hypothetical proteinchromosome CDS2712535 1188 + 0.660774
NA BP1004 phosphate acetyl/butaryl transferasechromosome CDS1049993 939 - 0.717785
NA BP0590 oxidoreductase, large chainchromosome CDS594696 2373 + 0.685209
NA BP1469 conserved hypothetical proteinchromosome CDS1544693 681 + 0.725404
NA BP2095 putative ferredoxinchromosome CDS2216857 315 + 0.660317
NA BP3269 putative monooxygenasechromosome CDS3486483 1170 + 0.734188
aceA BP2085 putative isocitrate lyasechromosome CDS2206955 1323 + 0.659864
aceE BP1121 pyruvate dehydrogenase E1 componentchromosome CDS1179093 2697 - 0.692251
aceE BP0993 pyruvate dehydrogenase E1 componentchromosome CDS1033996 2706 + 0.657428
aceF BP0994 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexchromosome CDS1036714 1662 + 0.690132
ackA BP1003 acetate kinasechromosome CDS1048777 1191 - 0.714526
acnA BP2369 aconitate hydratasechromosome CDS2506805 2694 + 0.676689
acnA BP2014 putative aconitate hydratasechromosome CDS2125147 2706 - 0.657798
acnB BP2021 putative aconitate hydratasechromosome CDS2134463 2592 - 0.660108
acoD BP2157 aldehyde dehydrogenasechromosome CDS2277421 1521 - 0.668639
adhI BP3751 alcohol dehydrogenase class IIIchromosome CDS3959822 1107 - 0.639566
ascD BP1817 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehy drase reductasechromosome CDS1905818 1047 + 0.669532
atpA BP3286 ATP synthase alpha chainchromosome CDS3501464 1542 + 0.639429
atpB BP3282 ATP synthase A chainchromosome CDS3499029 882 + 0.613379
atpC BP3289 ATP synthase epsilon chainchromosome CDS3505462 423 + 0.685579
atpD BP3288 ATP synthase beta chainchromosome CDS3504052 1401 + 0.648108
atpE BP3283 ATP synthase c chainchromosome CDS3500027 243 + 0.600823
atpF BP3284 ATP synthase B chainchromosome CDS3500407 471 + 0.624204
atpG BP3287 ATP synthase gamma chainchromosome CDS3503104 906 + 0.604856
atpH BP3285 ATP synthase delta chainchromosome CDS3500890 540 + 0.633333
citB BP0921 citrate utilization protein Bchromosome CDS958030 1185 - 0.65654
coIII BP3740 putative cytochrome c oxidase, subunit IIIchromosome CDS3947877 876 - 0.639269
ctaD BP3743 cytochrome c oxidase polypeptide Ichromosome CDS3949184 1608 - 0.642413
cydA BP0259 cytochrome D ubiquinol oxidase subunit Ichromosome CDS267871 1620 + 0.651852
cydB BP0260 cytochrome D ubiquinol oxidase subunit IIchromosome CDS269506 1155 + 0.674459
cyoA BP2933 putative ubiquinol oxidase polypeptide IIchromosome CDS3121471 915 - 0.639344
cyoB BP2932 ubiquinol oxidase polypeptide Ichromosome CDS3119488 1980 - 0.613636
cyoC BP2931 cytochrome O ubiquinol oxidasechromosome CDS3118873 612 - 0.612745
cyoD BP2930 cytochrome 0 ubiquinol oxidasechromosome CDS3118526 348 - 0.637931
cyt BP3042 cytochrome c-552 precursorchromosome CDS3242024 333 - 0.720721
dld BP0651 D-lactate dehydrogenasechromosome CDS658100 1722 + 0.674797
dsbA BP0113 thiol:disulfide interchange protein DsbA precursorchromosome CDS110553 630 - 0.666667
etfA BP0962 electron transfer flavoprotein alpha-subunitchromosome CDS1000150 930 + 0.710753
etfB BP0961 electron transfer flavoprotein beta-subunitchromosome CDS999401 750 + 0.654667
fdhA BP1472 formate dehydrogenase large subunit precursorchromosome CDS1548567 2892 + 0.65491
fdhC BP1475 formate dehydrogenase subunit C precursorchromosome CDS1552339 1158 + 0.670121
fdx BP3470 ferredoxinchromosome CDS3683779 252 - 0.583333
fdx BP1804 ferredoxin, 2Fe-2Schromosome CDS1894228 342 + 0.616959
fhp BP2212 flavohemoprotein; putative flavohemoproteinchromosome CDS2335942 1209 - 0.693135
fimD BP1883 fimbrial adhesinchromosome CDS1983748 1098 + 0.639344
fmdA BP1516 formamidasechromosome CDS1591188 1227 - 0.664222
fpr BP1606 ferredoxin--NADP reductasechromosome CDS1686783 777 + 0.635779
fumC BP0248 fumarate hydratase class IIchromosome CDS256543 1392 + 0.678879
gabD BP0919 putative succinate-semialdehyde dehydrogenase [NADP+]chromosome CDS955102 1455 + 0.691409
gabD BP0757 succinate-semialdehyde dehydrogenase [NADP+]chromosome CDS773695 1482 + 0.713225
gabD BP1976 succinate-semialdehyde dehydrogenase [NADP+]chromosome CDS2083103 1470 - 0.67619
glcB BP3680 malate synthase Gchromosome CDS3888430 2178 - 0.688705
glcD BP2905 glycolate oxidase subunitchromosome CDS3082629 1500 - 0.663333
glcE BP2904 glycolate oxidase subunitchromosome CDS3081508 1110 - 0.717117
glcF BP2903 glycolate oxidase iron-sulfur subunitchromosome CDS3080246 1230 - 0.694309
glpK BP3825 glycerol kinasechromosome CDS4032293 1527 + 0.717747
gltA BP2358 citrate synthasechromosome CDS2497246 1311 - 0.628528
gor BP2120 glutathione reductasechromosome CDS2243151 1353 + 0.675536
gpsA BP0603 glycerol-3-phosphate dehydrogenase [NAD(P)+]chromosome CDS609000 1056 - 0.749053
icd BP2488 isocitrate dehydrogenase [NADP]chromosome CDS2636446 1257 - 0.627685
iscU BP1800 [Fe-S] cluster formation/repair proteinchromosome CDS1890976 411 + 0.644769
ldh BP0379 putative L-lactate dehydrogenasechromosome CDS380846 1056 - 0.707386
leuB BP1483 3-isopropylmalate dehydrogenasechromosome CDS1559895 1077 + 0.675952
lldA BP1669 lactate dehydrogenasechromosome CDS1755678 1197 - 0.680033
lldD BP0484 L-lactate dehydrogenasechromosome CDS495854 1164 - 0.676117
lldD BP1293 putative L-lactate dehydrogenasechromosome CDS1364167 1182 - 0.728426
lpdA BP0618 dihydrolipoamide dehydrogenasechromosome CDS623630 1410 - 0.711348
lpdA BP0995 dihydrolipoamide dehydrogenasechromosome CDS1038388 1791 + 0.691234
maeB BP1120 NADP-dependent malic enzymechromosome CDS1176656 2283 - 0.653088
maeB BP1064 NADP-dependent malic enzymechromosome CDS1109230 2289 + 0.675404
maeB BP3456 NADP-dependent malic enzymechromosome CDS3665898 2289 - 0.675404
mdH BP2365 malate dehydrogenasechromosome CDS2503363 990 + 0.648485
ndh BP3491 putative NADH dehydrogenasechromosome CDS3700008 1320 - 0.694697
nemA BP1940 N-ethylmaleimide reductasechromosome CDS2040867 1113 + 0.719677
nuoA BP0841 probable NADH-ubiquinone oxidoreductase chain 3chromosome CDS870572 360 + 0.575
nuoB BP0842 NADH-ubiquinone oxidoreductase, 20 kDa subunitchromosome CDS870968 477 + 0.626834
nuoC BP0843 respiratory-chain NADH dehydrogenase, 30 kDa subunitchromosome CDS871519 624 + 0.637821
nuoD BP0844 respiratory-chain NADH dehydrogenase, 49 kDa subunitchromosome CDS872145 1257 + 0.6428
nuoE BP0845 respiratory-chain NADH dehydrogenase I, 24 kDa subunitchromosome CDS873447 495 + 0.6
nuoF BP0846 respiratory-chain NADH dehydrogenase, 51 kDa subunitchromosome CDS873938 1368 + 0.644737
nuoG BP0847 NADH-ubiquinone oxidoreductase, 75 kDa subunitchromosome CDS875321 2328 + 0.699742
nuoH BP0848 NADH-ubiquinone oxidoreductase, chain Hchromosome CDS877648 1074 + 0.639665
nuoI BP0849 NADH-ubiquinone oxidoreductase, chain Ichromosome CDS878743 489 + 0.611452
nuoJ BP0850 NADH-ubiquinone oxidoreductase, chain Jchromosome CDS879249 648 + 0.655864
nuoK BP0851 NADH-ubiquinone oxidoreductase, chain Kchromosome CDS879893 309 + 0.601942
nuoL BP0852 NADH-ubiquinone oxidoreductase, chain Lchromosome CDS880219 2013 + 0.640338
nuoM BP0853 NADH-ubiquinone oxidoreductase, chain Mchromosome CDS882231 1500 + 0.632
nuoN BP0854 NADH-ubiquinone oxidoreductase, chain Nchromosome CDS883741 1485 + 0.665993
odhA BP1124 2-oxoglutarate dehydrogenase E1 componentchromosome CDS1184812 2871 + 0.660745
odhB BP1125 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complexchromosome CDS1187728 1215 + 0.685597
odhL BP1126 2-oxoglutarate dehydrogenase complex, E3 componentchromosome CDS1189172 1428 + 0.665266
pdhA BP0629 putative pyruvate dehydrogenase E1 component, alpha subunitchromosome CDS636619 972 - 0.694444
petA BP0277 ubiquinol-cytochrome C reductase iron-sulfur subunitchromosome CDS282905 642 - 0.657321
petB BP0276 cytochrome Bchromosome CDS281458 1383 - 0.631959
petC BP0275 cytochrome C1 precursorchromosome CDS280584 849 - 0.640754
phaD BP1693 putative pH adaptation potassium efflux proteinchromosome CDS1778699 1629 + 0.696133
pntaA BP2897 NAD(P) transhydrogenase, subunit alpha part 1chromosome CDS3073029 1119 + 0.681859
ppa BP2533 inorganic pyrophosphatasechromosome CDS2684177 537 - 0.614525
ppc BP0215 phosphoenolpyruvate carboxylasechromosome CDS220068 2943 + 0.700646
prpC BP2368 2-methylcitrate synthasechromosome CDS2505583 1203 + 0.646717
putA BP2749 bifunctional proline oxidoreductase/transcriptional repressorchromosome CDS2916701 3822 - 0.694924
qor BP2283 quinone oxidoreductasechromosome CDS2404354 990 - 0.682828
rubA BP0318 rubredoxinchromosome CDS323300 165 + 0.575758
sdhA BP2361 succinate dehydrogenase flavoprotein subunitchromosome CDS2499592 1779 - 0.662732
sdhB BP2360 succinate dehydrogenase iron-sulfur proteinchromosome CDS2498863 717 - 0.617852
sdhC BP2363 succinate dehydrogenase cytochrome B subunitchromosome CDS2501757 414 - 0.60628
sdhD BP2362 succinate dehydrogenase hydrophobic membrane anchor proteinchromosome CDS2501374 384 - 0.609375
sucC BP2541 Succinyl-CoA synthetase, beta chainchromosome CDS2692197 1161 - 0.630491
sucD BP2540 succinyl-CoA synthetase, alpha chainchromosome CDS2691296 882 - 0.642857
trxA BP1263 thioredoxin 1chromosome CDS1335621 426 - 0.615023
trxC BP1713 thioredoxin 2chromosome CDS1797518 384 - 0.651042
ugpQ BP1731 glycerophosphoryl diester phosphodiesterasechromosome CDS1814441 750 - 0.709333