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2024-05-19 03:27:54

Gene list

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COG category: Energy production and conversion
Organism: Vibrio vulnificus YJ016, YJ016

Number of genes found: 216

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Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VV0001 MioC proteinchromosome I CDS353 435 - 0.514943
VV0027 Zn-binding alcohol dehydrogenasechromosome I CDS24886 981 - 0.518858
VV0033 protoporphyrinogen oxidasechromosome I CDS31755 531 + 0.412429
VV0041 cytochrome c5chromosome I CDS48469 453 - 0.476821
VV0065 glutathione reductasechromosome I CDS75517 1356 - 0.530973
VV0126 pyridine nucleotide-disulfide oxidoreductase, class Ichromosome I CDS132453 1401 - 0.511064
VV0158 glycerol dehydrogenasechromosome I CDS163739 1089 + 0.421488
VV0188 cytochrome c4chromosome I CDS200481 618 + 0.461165
VV0207 phosphoenolpyruvate carboxykinasechromosome I CDS220634 1629 - 0.487416
VV0432 inorganic pyrophosphatasechromosome I CDS423713 531 - 0.487759
VV0467 malate/lactate dehydrogenasechromosome I CDS454129 933 + 0.485531
VV0486 3-isopropylmalate dehydrogenasechromosome I CDS471128 1092 - 0.5
VV0492 glycosyl transferasechromosome I CDS476000 1047 + 0.466094
VV0596 ubiquinol-cytochrome c reductase, iron-sulfur subunitchromosome I CDS581037 591 + 0.492386
VV0597 ubiquinol-cytochrome c reductase, cytochrome bchromosome I CDS581627 1266 + 0.444708
VV0598 ubiquinol-cytochrome c reductase, cytochrome c1chromosome I CDS582889 738 + 0.466125
VV0664 flavodoxinchromosome I CDS660314 519 - 0.483622
VV0672 oxidoreductase Tas, aldo/keto reductase familychromosome I CDS669655 1035 - 0.457005
VV0720 ferredoxinchromosome I CDS723889 255 - 0.443137
VV0741 malate synthasechromosome I CDS746365 1653 + 0.469449
VV0742 isocitrate lyasechromosome I CDS748085 1374 + 0.491266
VV0756 NifU-related proteinchromosome I CDS761924 384 + 0.4375
VV0760 ferredoxinchromosome I CDS765166 339 + 0.460177
VV0826 sodium/glutamate symporterchromosome I CDS829340 1281 + 0.481655
VV0841 Zn-dependent alcohol dehydrogenase, class IIIchromosome I CDS844629 1131 - 0.4916
VV0918 2-polyprenyl-6-methoxyphenol hydroxylasechromosome I CDS922139 1221 + 0.470106
VV1016 flavodoxinchromosome I CDS1015230 570 - 0.447368
VV1027 citrate synthasechromosome I CDS1025323 1290 - 0.475969
VV1028 succinate dehydrogenase, cytochrome b556 subunitchromosome I CDS1027008 393 + 0.458015
VV1029 succinate dehydrogenase, hydrophobic anchor subunitchromosome I CDS1027394 345 + 0.44058
VV1030 succinate dehydrogenase, flavoprotein subunitchromosome I CDS1027739 1767 + 0.49236
VV1031 succinate dehydrogenase, iron-sulfur proteinchromosome I CDS1029471 759 + 0.450593
VV1032 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) componentchromosome I CDS1030331 2826 + 0.485492
VV1033 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamidechromosome I CDS1033185 1209 + 0.476427
VV1034 succinyl-CoA synthetase beta subunitchromosome I CDS1034584 1167 + 0.465296
VV1035 succinyl-CoA synthetase, alpha subunitchromosome I CDS1035750 873 + 0.475372
VV1085 putative oxidoreductase proteinchromosome I CDS1084636 1257 + 0.499602
VV1154 nitroreductasechromosome I CDS1167488 546 + 0.514652
VV1170 Na+/H+ antiporterchromosome I CDS1185166 1437 - 0.477383
VV1175 alcohol dehydrogenase/acetaldehyde dehydrogenasechromosome I CDS1191015 2676 + 0.467489
VV1187 predicted NADH:ubiquinone oxidoreductase, subunit RnfEchromosome I CDS1202269 705 - 0.496454
VV1188 predicted NADH:ubiquinone oxidoreductase, subunit RnfGchromosome I CDS1202954 636 - 0.474843
VV1189 predicted NADH:ubiquinone oxidoreductase, subunit RnfDchromosome I CDS1203605 1068 - 0.493446
VV1190 predicted NADH:ubiquinone oxidoreductase, subunit RnfCchromosome I CDS1204672 2658 - 0.511287
VV1191 predicted NADH:ubiquinone oxidoreductase, subunit RnfBchromosome I CDS1207342 597 - 0.485762
VV1192 predicted NADH:ubiquinone oxidoreductase, subunit RnfAchromosome I CDS1207940 639 - 0.449139
VV1215 proton/glutamate symporterchromosome I CDS1227277 1305 - 0.47433
VV1242 ferredoxinchromosome I CDS1259327 279 - 0.476703
VV1251 cytochrome c-type protein NrfB precursorchromosome I CDS1270526 588 + 0.454082
VV1252 formate-dependent nitrite reductase complex, Fe-S proteinchromosome I CDS1271004 798 + 0.477444
VV1255 thiol:disulfide interchange protein DsbEchromosome I CDS1274673 522 + 0.411877
VV1347 conserved hypothetical proteinchromosome I CDS1373877 1602 + 0.448814
VV1374 cytochrome c-type protein TorCchromosome I CDS1396933 1185 + 0.472574
VV1375 anaerobic dehydrogenasechromosome I CDS1398142 2463 + 0.493301
VV1381 conserved hypothetical proteinchromosome I CDS1407143 1041 + 0.463977
VV1405 flavodoxin reductase family 1chromosome I CDS1431840 1116 - 0.485663
VV1406 6Fe-6S prismane cluster-containing proteinchromosome I CDS1432945 1662 - 0.496992
VV1440 alcohol dehydrogenase, class IVchromosome I CDS1472662 1248 + 0.483173
VV1453 transport ATP-binding protein CydCchromosome I CDS1487057 1839 - 0.487221
VV1454 transport ATP-binding protein CydDchromosome I CDS1488771 1788 - 0.486577
VV1464 malic enzymechromosome I CDS1499478 1776 - 0.489302
VV1507 glycerophosphoryl diester phosphodiesterasechromosome I CDS1540935 708 - 0.470339
VV1530 citrate synthasechromosome I CDS1566947 1206 + 0.509121
VV1531 aconitase Achromosome I CDS1568205 2616 + 0.540138
VV1550 acylphosphatasechromosome I CDS1597474 273 + 0.421245
VV1559 ferredoxinchromosome I CDS1605591 906 + 0.507726
VV1560 polyferredoxinchromosome I CDS1606496 855 + 0.474854
VV1572 NAD-dependent aldehyde dehydrogenasechromosome I CDS1616110 1407 + 0.508173
VV1585 NAD-dependent aldehyde dehydrogenasechromosome I CDS1627031 1521 + 0.508876
VV1589 NAD-dependent aldehyde dehydrogenasechromosome I CDS1630941 1452 + 0.507576
VV1657 thiol-disulfide isomerase and thioredoxinchromosome I CDS1712484 279 + 0.437276
VV1672 Cbb3-type cytochrome oxidase, cytochrome c subunitchromosome I CDS1727251 621 + 0.441224
VV1674 cytochrome c oxidase, subunit CcoPchromosome I CDS1728056 978 + 0.466258
VV1698 formate dehydrogenase, cytochrome B556 subunitchromosome I CDS1749486 1059 - 0.470255
VV1699 formate dehydrogenase, iron-sulfur subunitchromosome I CDS1750559 609 - 0.515599
VV1700 putative formate dehydrogenase large subunitchromosome I CDS1751179 2856 - 0.506653
VV1703 ferredoxinchromosome I CDS1754940 1674 - 0.493429
VV1706 formate dehydrogenase accessory proteinchromosome I CDS1758147 828 + 0.457729
VV1956 Fe-S oxidoreductasechromosome I CDS1946128 3045 - 0.480788
VV2026 DnaK-related proteinchromosome I CDS2022472 2808 + 0.517806
VV2079 fumarate hydratase, class Ichromosome I CDS2083531 1524 - 0.509186
VV2118 predicted thiol oxidoreductasechromosome I CDS2127034 1380 - 0.491304
VV2133 acetate kinasechromosome I CDS2143580 1197 + 0.461988
VV2143 putative Fe-S oxidoreductase family 2chromosome I CDS2157098 2307 + 0.516688
VV2174 D-lactate dehydrogenasechromosome I CDS2183424 1029 - 0.482021
VV2175 alcohol dehydrogenase, class IVchromosome I CDS2184765 1149 - 0.505657
VV2220 putative tetrathionate reductase complex, subunit Achromosome I CDS2237581 3093 - 0.501778
VV2222 tetrathionate reductase, subunit Bchromosome I CDS2241785 768 - 0.501302
VV2242 malic enzymechromosome I CDS2264429 1680 - 0.466071
VV2244 C4-dicarboxylate transporterchromosome I CDS2267477 1371 - 0.476295
VV2282 cytochrome d ubiquinol oxidase, subunit IIchromosome I CDS2296625 1137 - 0.483729
VV2283 cytochrome d ubiquinol oxidase, subunit Ichromosome I CDS2297778 1617 - 0.478046
VV2296 NAD-dependent aldehyde dehydrogenasechromosome I CDS2313760 1485 - 0.506397
VV2325 isocitrate dehydrogenasechromosome I CDS2346252 2226 - 0.457772
VV2342 formate acetyltransferasechromosome I CDS2368706 2277 + 0.466842
VV2368 NADH dehydrogenase, FAD-containing subunitchromosome I CDS2398269 1290 - 0.497674
VV2384 putative transcriptional activator CadCchromosome I CDS2417656 1581 - 0.489564
VV2449 thiol-disulfide interchange protein CcmGchromosome I CDS2484570 573 - 0.488656
VV2537 cytochrome c553chromosome I CDS2565818 315 - 0.498413
VV2585 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrFchromosome I CDS2613720 1224 - 0.461601
VV2586 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrEchromosome I CDS2614977 597 - 0.448911
VV2587 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrDchromosome I CDS2615581 633 - 0.42812
VV2588 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrCchromosome I CDS2616213 801 - 0.47191
VV2589 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrBchromosome I CDS2616970 1245 - 0.491566
VV2590 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrAchromosome I CDS2618220 1353 - 0.475979
VV2624 glycerol kinasechromosome I CDS2652801 1518 + 0.523715
VV2626 glycerol-3-phosphate dehydrogenasechromosome I CDS2655249 1731 + 0.500289
VV2638 galactose-1-phosphate uridylyltransferasechromosome I CDS2668392 1068 - 0.509363
VV2670 hypothetical proteinchromosome I CDS2705015 1212 - 0.450495
VV2753 aconitate hydrase Bchromosome I CDS2801981 2598 - 0.49846
VV2771 pyruvate dehydrogenase, E3 component, lipoamide dehydrogenasechromosome I CDS2824364 1428 - 0.478291
VV2772 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferasechromosome I CDS2826049 1896 - 0.494726
VV2773 pyruvate dehydrogenase complex, dehydrogenase componentchromosome I CDS2827964 2661 - 0.47764
VV2797 NADPH:quinone reductasechromosome I CDS2852292 951 - 0.502629
VV2798 oxaloacetate decarboxylase, beta subunitchromosome I CDS2853362 1131 - 0.505747
VV2799 oxaloacetate decarboxylase, alpha subunitchromosome I CDS2854502 1791 - 0.501396
VV2800 oxaloacetate decarboxylase, gamma subunitchromosome I CDS2856318 312 - 0.474359
VV2845 VisC proteinchromosome I CDS2902689 1233 - 0.510949
VV2846 2-polyprenyl-6-methoxyphenol hydroxylasechromosome I CDS2903935 1176 - 0.505952
VV2885 conserved hypothetical proteinchromosome I CDS2936532 273 + 0.424908
VV2889 uncharacterized flavoproteinchromosome I CDS2941941 732 + 0.441257
VV2923 lactate dehydrogenasechromosome I CDS2981793 963 - 0.525441
VV3004 phosphoenolpyruvate carboxylasechromosome I CDS3081345 2667 + 0.501312
VV3010 malic enzymechromosome I CDS3090559 1278 - 0.489828
VV3049 phosphoribulokinasechromosome I CDS3124999 870 + 0.490805
VV3052 NAD-dependent aldehyde dehydrogenasechromosome I CDS3127958 1461 - 0.54141
VV3064 flavodoxin reductase (ferredoxin-NADPH reductase) family 1chromosome I CDS3145307 1185 + 0.481857
VV3076 uncharacterized Fe-S proteinchromosome I CDS3158558 1122 + 0.493761
VV3087 glycerol-3-phosphate dehydrogenasechromosome I CDS3170406 1038 + 0.516378
VV3097 fumarate reductase, flavoprotein subunitchromosome I CDS3178525 1887 + 0.504505
VV3098 fumarate reductase, iron-sulfur proteinchromosome I CDS3180411 759 + 0.490119
VV3099 fumarate reductase subunit Cchromosome I CDS3181172 384 + 0.481771
VV3100 fumarate reductase subunit Dchromosome I CDS3181568 378 + 0.494709
VV3120 thiol:disulfide interchange proteinchromosome I CDS3200813 1797 + 0.498609
VV3177 NAD(P)H-flavin reductasechromosome I CDS3264846 714 - 0.435574
VV3178 ferredoxinchromosome I CDS3265574 294 - 0.431973
VV3182 thiol-disulfide isomerase and thioredoxinchromosome I CDS3270343 339 - 0.471976
VV3234 FixG-related proteinchromosome I CDS3323931 1488 + 0.49328
VV3236 thiol:disulfide interchange proteinchromosome I CDS3326489 606 + 0.465347
VV3250 F0F1-type ATP synthase epsilon subunitchromosome I CDS3343024 423 - 0.491726
VV3251 F0F1-type ATP synthase, beta subunitchromosome I CDS3343465 1404 - 0.486467
VV3252 F0F1-type ATP synthase, gamma subunitchromosome I CDS3344904 867 - 0.463668
VV3253 F0F1-type ATP synthase, alpha subunitchromosome I CDS3345814 1572 - 0.470102
VV3254 F0F1-type ATP synthase, delta subunitchromosome I CDS3347369 546 - 0.461538
VV3255 F0F1-type ATP synthase, subunit bchromosome I CDS3347917 471 - 0.441614
VV3256 ATP synthase F0, C subunitchromosome I CDS3348459 270 - 0.444444
VV3257 F0F1-type ATP synthase, subunit achromosome I CDS3348769 813 - 0.441574
VV3258 F0F1-type ATP synthase, subunit Ichromosome I CDS3349590 390 - 0.458974
VVA0093 NAD-dependent aldehyde dehydrogenasechromosome II CDS105673 1428 + 0.52381
VVA0171 ferredoxinchromosome II CDS199819 324 - 0.496914
VVA0181 putative flavodoxinchromosome II CDS207829 1485 + 0.474747
VVA0200 anaerobic dehydrogenasechromosome II CDS225664 4200 + 0.540238
VVA0220 proton/glutamate symporterchromosome II CDS253593 1305 - 0.502682
VVA0228 nitroreductasechromosome II CDS261865 723 - 0.521438
VVA0259 thiol-disulfide isomerase and thioredoxinschromosome II CDS296957 603 + 0.452736
VVA0276 lactate dehydrogenasechromosome II CDS315984 957 + 0.469175
VVA0287 hypothetical proteinchromosome II CDS330129 441 + 0.487528
VVA0290 soluble cytochrome b562chromosome II CDS331487 402 + 0.435323
VVA0408 flavodoxin reductase (ferredoxin-NADPH reductase) family 1chromosome II CDS478718 1959 + 0.480858
VVA0459 malate synthasechromosome II CDS525934 621 + 0.434783
VVA0507 NAD-dependent aldehyde dehydrogenasechromosome II CDS574697 1461 + 0.498973
VVA0519 glycerol-3-phosphate dehydrogenasechromosome II CDS589545 1716 + 0.49359
VVA0521 Fe-S oxidoreductasechromosome II CDS592558 1233 + 0.462287
VVA0527 alcohol dehydrogenase, class IVchromosome II CDS598628 1149 - 0.492602
VVA0559 NAD-dependent aldehyde dehydrogenasechromosome II CDS630813 1524 + 0.463255
VVA0560 cytochrome c553chromosome II CDS632295 321 - 0.498442
VVA0605 hypothetical proteinchromosome II CDS681162 381 - 0.446194
VVA0640 putative cytochrome c-type proteinchromosome II CDS713065 558 - 0.455197
VVA0641 cytochrome c553chromosome II CDS713649 624 - 0.455128
VVA0643 putative deca-heme c-type cytochromechromosome II CDS717227 972 + 0.479424
VVA0658 acetate kinasechromosome II CDS742869 1194 + 0.480737
VVA0676 conserved hypothetical proteinchromosome II CDS766514 363 + 0.46832
VVA0718 uncharacterized oxidoreductasechromosome II CDS814383 1161 - 0.497847
VVA0735 cytochrome B561chromosome II CDS835492 540 + 0.444444
VVA0783 acyl-CoA synthetasechromosome II CDS883857 2679 - 0.469951
VVA0811 NAD(P) transhydrogenase, beta subunitchromosome II CDS904083 1395 - 0.462366
VVA0812 NAD(P) transhydrogenase, alpha subunitchromosome II CDS905491 1689 - 0.462404
VVA0854 conserved hypothetical proteinchromosome II CDS954955 1698 - 0.487044
VVA0907 thiol-disulfide isomerase and thioredoxinschromosome II CDS997987 435 + 0.468966
VVA0927 NAD(P)H-nitrite reductasechromosome II CDS1015058 2562 - 0.493755
VVA0948 NAD(P)H-nitrite reductasechromosome II CDS1045707 2484 - 0.520129
VVA0958 anaerobic dehydrogenasechromosome II CDS1055455 2643 - 0.529701
VVA0967 glycerophosphoryl diester phosphodiesterasechromosome II CDS1069385 1059 + 0.471199
VVA0971 C4-dicarboxylate transporterchromosome II CDS1074569 1380 + 0.484058
VVA0975 uncharacterized protein conserved in bacteriachromosome II CDS1078940 1365 + 0.447619
VVA0977 hypothetical proteinchromosome II CDS1085531 909 - 0.446645
VVA1021 putative pyruvate dehydrogenase E1 component, alpha subunitchromosome II CDS1132394 1095 + 0.512329
VVA1022 putative pyruvate dehydrogenase E1 component, beta subunitchromosome II CDS1133481 984 + 0.528455
VVA1023 putative dihydrolipoamide acetyltransferasechromosome II CDS1134461 1146 + 0.526178
VVA1024 electron transfer flavoprotein, alpha subunitchromosome II CDS1135832 1017 - 0.519174
VVA1025 electron transfer flavoprotein, beta subunitchromosome II CDS1136829 777 - 0.5148
VVA1026 electron transfer flavoprotein-ubiquinone oxidoreductasechromosome II CDS1137812 1668 + 0.514389
VVA1042 NAD-dependent aldehyde dehydrogenasechromosome II CDS1170688 1548 - 0.531008
VVA1074 hypothetical proteinchromosome II CDS1199882 633 + 0.459716
VVA1113 cytochrome c oxidase, subunit IIIchromosome II CDS1241821 885 - 0.472316
VVA1115 cytochrome c oxidase, subunit Ichromosome II CDS1243320 1632 - 0.496324
VVA1116 cytochrome c oxidase, subunit IIchromosome II CDS1244948 1161 - 0.499569
VVA1128 thiol-disulfide isomerase and thioredoxinschromosome II CDS1254909 492 + 0.481707
VVA1189 ferredoxinchromosome II CDS1311573 483 + 0.445135
VVA1192 anaerobic dehydrogenasechromosome II CDS1312378 2490 + 0.48996
VVA1193 nitrate reductase cytochrome c-type subunitchromosome II CDS1314942 477 + 0.457023
VVA1194 periplasmic nitrate reductase, cytochrome c-type proteinchromosome II CDS1315449 576 + 0.480903
VVA1261 L-lactate permeasechromosome II CDS1385952 1908 + 0.5
VVA1262 Fe-S oxidoreductasechromosome II CDS1388007 756 + 0.492063
VVA1263 uncharacterized conserved protein containing a ferredoxin-like domainchromosome II CDS1388762 1431 + 0.498253
VVA1265 Fe-S oxidoreductasechromosome II CDS1391018 2841 + 0.497712
VVA1341 NAD-dependent aldehyde dehydrogenasechromosome II CDS1486167 1521 - 0.512821
VVA1449 flavodoxin reductasechromosome II CDS1599130 780 - 0.475641
VVA1455 nitroreductasechromosome II CDS1602031 654 - 0.492355
VVA1474 conserved hypothetical proteinchromosome II CDS1621990 357 + 0.45098
VVA1566 conserved hypothetical proteinchromosome II CDS1713097 993 - 0.48137
VVA1601 NADH:flavin oxidoreductasechromosome II CDS1744198 1095 + 0.519635
VVA1617 galactose-1-phosphate uridylyltransferasechromosome II CDS1763709 1131 - 0.523431
VVA1643 conserved hypothetical proteinchromosome II CDS1794011 708 - 0.50565
VVA1644 proline dehydrogenasechromosome II CDS1794730 3132 - 0.524585
VVP17 putative conjugative transfer protein TrbBpYJ016 CDS13897 414 + 0.512077