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2024-05-01 08:26:14

Gene list

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COG category: Energy production and conversion
Organism: Nitrosomonas europaea ATCC 19718, ATCC 19718

Number of genes found: 134

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Nitrosomonas europaea ATCC 19718, ATCC 19718
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NE2141 Sodium:dicarboxylate symporter familychromosome CDS2327519 1320 + 0.516667
NA NE1810 ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domainchromosome CDS1959228 1173 + 0.547315
NA NE0780 conserved hypothetical proteinchromosome CDS846309 558 + 0.516129
NA NE0122 hypothetical proteinchromosome CDS149894 387 - 0.501292
NA NE0742 Zinc-containing alcohol dehydrogenase superfamilychromosome CDS802806 1116 + 0.535842
NA NE0601 Na+/H+ antiporter NhaCchromosome CDS654957 1431 + 0.52341
NA NE1319 Thioredoxinchromosome CDS1439142 462 - 0.493506
NA NE0594 putative reductase oxidoreductase proteinchromosome CDS647527 1047 - 0.48233
NA NE2088 possible flagellar hook-length control proteinchromosome CDS2270548 1146 + 0.570681
NA NE0143 Chain A, Red Copper Protein Nitrosocyaninchromosome CDS168686 411 + 0.454988
NA NE0024 Cytochrome c, class Ichromosome CDS31294 369 + 0.455285
NA NE2510 NADH:flavin oxidoreductase/NADH oxidasechromosome CDS2743199 1065 - 0.624413
NA NE2157 dihydrolipoamide dehydrogenasechromosome CDS2340776 1803 - 0.518026
NA NE1009 D-lactate dehydrogenasechromosome CDS1096562 1368 + 0.486842
NA NE1274 Cytochrome c, class Ichromosome CDS1391628 888 + 0.480856
NA NE1874 putative ferredoxin 2fe-2s proteinchromosome CDS2026843 309 + 0.504854
NA NE0438 putative malate oxidoreductase (malic enzyme)chromosome CDS475400 1743 + 0.523236
NA NE2350 CAIB/BAIF familychromosome CDS2553016 1887 - 0.532591
NA NE0809 Rieske iron-sulfur protein 2Fe-2S subunitchromosome CDS880317 606 + 0.519802
NA NE2237 FAD linked oxidase, N-terminalchromosome CDS2425795 1689 - 0.462996
NA NE2222 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domainchromosome CDS2409988 657 + 0.564688
NA NE1512 Aromatic-ring hydroxylase (flavoprotein monooxygenase)chromosome CDS1646129 1167 - 0.550129
NA NE0735 Cytochrome c, class IC:Cytochrome c, class Ichromosome CDS797612 285 + 0.480702
NA NE1426 Rubredoxin:Rubredoxin-type Fe(Cys)4 proteinchromosome CDS1555618 189 + 0.465608
NA NE0773 Lactate/malate dehydrogenasechromosome CDS837591 984 - 0.468496
NA NE2003 nitric oxide reductase, cytochrome c-containing subunitchromosome CDS2163869 453 + 0.547461
NA NE0084 Thioredoxinchromosome CDS103482 237 + 0.468354
NA NE0736 Cytochrome c, class IC:Cytochrome c, class Ichromosome CDS797930 327 + 0.480122
NA NE0903 probable cytochrome cchromosome CDS984210 1278 - 0.508607
NA NE1720 Cytochrome c, class Ichromosome CDS1854990 480 - 0.422917
NA NE1046 Succinate dehydrogenase, cytochrome b subunitchromosome CDS1133399 393 + 0.491094
NA NE1670 glycolate oxidase iron-sulfur subunitchromosome CDS1806003 1275 - 0.502745
NA NE1493 Cytochrome c, class IC:Cytochrome c, class Ichromosome CDS1626308 492 + 0.54065
NA NE0741 FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminalchromosome CDS801210 1545 + 0.506149
NA NE0926 Cytochrome c, class Ichromosome CDS1009550 696 - 0.528736
NA NE2216 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS2403363 1194 - 0.5201
NA NE1440 hypothetical proteinchromosome CDS1570839 426 - 0.507042
NA NE1811 ATP-citrate lyase/succinyl-CoA ligases:DUF184chromosome CDS1960431 888 + 0.554054
NA NE1446 NifU-like N terminal domainchromosome CDS1578628 480 - 0.485417
NA NE1236 hypothetical proteinchromosome CDS1345778 2670 + 0.486517
NA NE0858 conserved hypothetical proteinchromosome CDS934943 3552 + 0.494651
NA NE0810 Cytochrome b/b6chromosome CDS880924 1248 + 0.455929
NA NE0739 Cytochrome c, class Ichromosome CDS799908 327 + 0.461774
NA NE2328 putative thioredoxinchromosome CDS2528874 258 - 0.410853
NA NE2126 glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomalchromosome CDS2308958 1086 + 0.573665
NA NE0774 pyridine nucleotide-disulfide oxidoreductase, class Ichromosome CDS838800 1419 + 0.497533
NA NE0620 Iron-containing alcohol dehydrogenasechromosome CDS675883 1185 - 0.544304
NA NE0904 possible cytochrome cchromosome CDS985484 720 - 0.508333
NA NE2390 Thioredoxinchromosome CDS2595881 549 + 0.48816
NA NE0137 conserved hypothetical proteinchromosome CDS163156 657 + 0.519026
NA NE1935 Inorganic H+ pyrophosphatasechromosome CDS2090790 2058 + 0.5345
NA NE0925 Cytochrome c, class IC:Cytochrome c, class Ichromosome CDS1009158 396 - 0.50505
NA NE1529 possible signal peptide proteinchromosome CDS1661067 498 - 0.534137
NA NE0294 Cytochrome c, class Ichromosome CDS320869 1944 + 0.603395
NA NE0322 conserved hypothetical proteinchromosome CDS356743 273 + 0.490842
NA NE0371 Glycerophosphoryl diester phosphodiesterasechromosome CDS416165 735 - 0.515646
aceE NE0361 aceE; pyruvate dehydrogenase e1 component oxidoreductase proteinchromosome CDS402913 2658 - 0.522573
aceF NE0360 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (e2) proteinchromosome CDS401482 1362 - 0.535977
ackA2 NE2134 Acetate and butyrate kinase:Acetate kinasechromosome CDS2316814 1251 + 0.534772
acnA1 NE1002 acnA1; aconitate hydratase proteinchromosome CDS1089057 2847 - 0.533895
adhC1 NE0907 Alcohol dehydrogenase class III and related dehydrogenaseschromosome CDS988710 1107 + 0.521229
atpA NE0204 FoF1-type ATP synthase alpha subunitchromosome CDS238113 1542 + 0.464332
atpB NE0200 ATP synthase A subunitchromosome CDS235919 810 + 0.433333
atpC NE0207 ATP synthase, Delta/Epsilon chainchromosome CDS241984 423 + 0.468085
atpD NE0206 FoF1-type ATP synthase beta subunitchromosome CDS240573 1383 + 0.465654
atpE NE0201 ATP synthase subunit Cchromosome CDS236771 273 + 0.501832
atpF NE0202 ATP synthase B/B' CF(0)chromosome CDS237090 474 + 0.472574
atpG NE0205 ATP synthase gamma subunitchromosome CDS239658 885 + 0.456497
atpH NE0203 ATP synthase, delta (OSCP) subunitchromosome CDS237564 537 + 0.433892
cbbP, prk NE1474 Phosphoribulokinasechromosome CDS1609724 870 - 0.494253
cbbS, rbcS NE1920 Ribulose bisphosphate carboxylase, small chainchromosome CDS2074196 357 - 0.436975
ccmG NE0769 Periplasmic protein thiol:disulfide oxidoreductase DsbEchromosome CDS834681 525 + 0.457143
coxA NE1016 Cytochrome c oxidase, subunit Ichromosome CDS1102158 1578 - 0.453105
coxA2 NE0683 Cytochrome c oxidase, subunit Ichromosome CDS741698 1479 - 0.491548
coxB NE1017 coxB; cytochrome C oxidase polypeptide II precursor (cytochrome AA3 subunit 2) transmembrane proteinchromosome CDS1103790 843 - 0.432977
coxB NE0684 possible cytochrome-c oxidase (EC 1.9.3.1) chain IIchromosome CDS743221 525 - 0.419048
coxC NE1013 Cytochrome c oxidase, subunit IIIchromosome CDS1100390 846 - 0.43026
cyc NE0273 Cytochrome c, class IC:Cytochrome c, class Ichromosome CDS303853 636 - 0.477987
cycX1 NE2336 putative tetraheme c-cytochromechromosome CDS2536078 702 - 0.487179
cycX3 NE0959 putative tetraheme c-cytochromechromosome CDS1044459 702 - 0.487179
cyt_c552 NE0102 Cytochrome c-552 precursorchromosome CDS130750 315 - 0.48254
dsbA NE0366 Thioredoxin:DSBA oxidoreductasechromosome CDS410162 651 + 0.485407
dsbD NE2389 Thioredoxin:Cytochrome c biogenesis protein transmembrane regionchromosome CDS2593830 1941 + 0.527563
eryB NE0370 NAD binding site:D-amino acid oxidasechromosome CDS414982 1176 - 0.543367
fdx1 NE0967 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domainchromosome CDS1053220 270 - 0.485185
fdxA NE0006 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domainchromosome CDS7350 324 + 0.444444
fumC NE2286 Fumarate lyasechromosome CDS2478982 1389 + 0.524838
gabD NE2000 Aldehyde dehydrogenase familychromosome CDS2159943 1332 - 0.542042
glcD NE0675 glcD; glycolate oxidase subunit GlcDchromosome CDS734144 1455 - 0.551203
glcE NE0674 FAD linked oxidase, N-terminalchromosome CDS733049 1086 - 0.547882
glcf,gox NE0673 glcF; glycolate oxidase (iron-sulfur subunit) proteinchromosome CDS731786 1260 - 0.564286
gltA NE2373 Citrate synthasechromosome CDS2579143 1284 + 0.530374
gpsA NE2208 NAD-dependent glycerol-3-phosphate dehydrogenasechromosome CDS2397380 990 - 0.540404
hprA NE0101 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS129566 969 - 0.514964
icd NE1730 icd; isocitrate dehydrogenase [NADP] oxidoreductase proteinchromosome CDS1865346 1248 + 0.492788
ldhA NE0899 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS977894 993 + 0.469285
leuB NE0688 leuB, 3-isopropylmalate dehydrogenasechromosome CDS746278 1071 + 0.521942
lpdA3 NE2319 pdA3; dihydrolipoamide dehydrogenase E3 componentchromosome CDS2520078 1473 - 0.547183
merA NE0839 merA; mercuric reductasechromosome CDS916637 1686 - 0.658956
nqrA NE2397 Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq1chromosome CDS2602552 1359 - 0.502575
nqrB NE2396 Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2chromosome CDS2601348 1197 - 0.496241
nqrC NE2395 Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq3chromosome CDS2600561 795 - 0.500629
nqrD NE2394 RnfA-Nqr electron transport subunitchromosome CDS2599889 672 - 0.494048
nqrE NE2393 RnfA-Nqr electron transport subunitchromosome CDS2599284 609 - 0.482759
nqrF NE2392 nqrF; Na(+)-translocating NADH-ubiquinone reductase subunit Fchromosome CDS2597901 1221 - 0.48321
nuoA NE1777 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3chromosome CDS1922047 369 - 0.433604
nuoB NE1776 Respiratory-chain NADH dehydrogenase 20 Kd subunitchromosome CDS1921567 477 - 0.480084
nuoC NE1775 Respiratory-chain NADH dehydrogenase 30 Kd subunitchromosome CDS1920934 621 - 0.463768
nuoD NE1774 NADH-ubiquinone oxidoreductase 49Kd chainchromosome CDS1919620 1254 - 0.476874
nuoE NE1773 Respiratory-chain NADH dehydrogenase 24 Kd subunitchromosome CDS1919135 489 - 0.447853
nuoF NE1772 Respiratory-chain NADH dehydrogenase 51 Kd subunitchromosome CDS1917861 1278 - 0.495305
nuoG NE1771 Ferredoxin:Prokaryotic molybdopterin oxidoreductaseschromosome CDS1915393 2406 - 0.477972
nuoH NE1770 Respiratory-chain NADH dehydrogenase subunit 1chromosome CDS1914270 1101 - 0.49228
nuoI NE1769 nuoI; NADH dehydrogenase I (chain I) oxidoreductase proteinchromosome CDS1913768 489 - 0.486708
nuoJ NE1768 NADH-ubiquinone/plastoquinone oxidoreductase chain 6chromosome CDS1913145 606 - 0.429043
nuoK NE1767 possible nuoK; transmembrane NADH dehydrogenase I (chain K) oxidoreductase proteinchromosome CDS1912784 306 - 0.441176
nuoL NE1766 probable nuoL; transmembrane NADH dehydrogenase I (chain L) oxidoreductase proteinchromosome CDS1910773 1947 - 0.466359
nuoM NE1765 possible nuoM; transmembrane NADH dehydrogenase I (chain M) oxidoreductase proteinchromosome CDS1909206 1482 - 0.478408
nuoN NE1764 possible nuoN; transmembrane NADH dehydrogenase I (chain N) oxidoreductase proteinchromosome CDS1907694 1446 - 0.467497
odhA NE2374 Transketolase:Dehydrogenase, E1 componentchromosome CDS2580587 2859 + 0.52326
petC NE0811 Cytochrome c1chromosome CDS882168 705 + 0.466667
phaD NE1903 phaD; PH adaptation potassium efflux system D transmembrane proteinchromosome CDS2057117 1650 + 0.534545
pntAa NE0859 Alanine dehydrogenase and pyridine nucleotide transhydrogenasechromosome CDS938615 1128 + 0.504433
pntAb2 NE0860 probable transmembrane NAD(P) transhydrogenase (alpha subunit part 2)chromosome CDS939798 309 + 0.459547
pntB NE0861 NAD(P) transhydrogenase beta subunitchromosome CDS940107 1380 + 0.484783
ppc NE0589 Phosphoenolpyruvate carboxylasechromosome CDS640638 2802 - 0.533547
sdhA NE1048 Succinate dehydrogenase/fumarate reductase, flavoprotein subunitschromosome CDS1134140 1764 + 0.535147
sdhB NE2371 sdhB; succinate dehydrogenase (iron-sulfur subunit) oxidoreductase proteinchromosome CDS2578160 696 + 0.518678
sdhD NE1047 Succinate dehydrogenase, cytochrome b subunitchromosome CDS1133785 354 + 0.460452
sucB NE2375 sucB; dihydrolipoamide succinyltransferase (component of 2-oxoglutarate dehydrogenase complex) proteinchromosome CDS2583467 1278 + 0.522692
sucC NE0050 ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domainchromosome CDS64417 1194 + 0.521776
sucD NE0051 ATP-citrate lyase/succinyl-CoA ligases:DUF184chromosome CDS65613 876 + 0.510274
trxA NE1034 Thioredoxinchromosome CDS1122055 327 + 0.443425
ubiH NE0873 Aromatic-ring hydroxylase (flavoprotein monooxygenase)chromosome CDS952057 1137 + 0.525066