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2024-05-20 05:54:28

Gene list

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COG category: Energy production and conversion
Organism: Yersinia pestis CO92, CO92

Number of genes found: 190

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Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YPO0001 putative flavoprotein chromosome CDS271 441 - 0.428571
YPO0308 putative oxidoreductase chromosome CDS309654 2058 + 0.480564
YPO0327 probable alcohol dehydrogenase chromosome CDS335861 1149 - 0.510879
YPO0367 putative iron-sulfur cluster-binding protein chromosome CDS379821 1236 - 0.512136
YPO0624 putative membrane protein chromosome CDS685400 1452 + 0.435262
YPO0678 putative iron-containing alcohol dehydrogenase chromosome CDS739614 1158 - 0.513817
YPO0867 putative membrane protein chromosome CDS953638 780 - 0.351282
YPO0953 conserved hypothetical protein chromosome CDS1051868 273 + 0.410256
YPO1039 conserved hypothetical protein chromosome CDS1179346 450 + 0.495556
YPO1063 putative cytochrome chromosome CDS1207536 318 + 0.477987
YPO1212 putative iron-sulphur binding protein chromosome CDS1365403 258 - 0.492248
YPO1290 putative aldehyde dehydrogenase chromosome CDS1448444 1497 + 0.569806
YPO1417 putative iron-sulfur binding protein chromosome CDS1609348 1113 - 0.487871
YPO1446 putative acylphosphatase chromosome CDS1638763 279 + 0.526882
YPO1451 putative oxidoreductase chromosome CDS1643068 2418 - 0.498759
YPO1502 probable alcohol dehydrogenase chromosome CDS1704921 1134 - 0.514991
YPO1556 putative dehydrogenase chromosome CDS1770218 1092 + 0.549451
YPO1617 NADH dehydrogenase chromosome CDS1839569 1305 + 0.482759
YPO1653 probable Zinc-binding dehydrogenase chromosome CDS1878633 1011 - 0.504451
YPO1926 putative 4-hydroxybutyrate coenzyme A transferase chromosome CDS2183470 1323 - 0.504157
YPO1935 putative Na(+)-translocating NADH-quinone reductase subunit E chromosome CDS2192118 600 - 0.411667
YPO1947 putative thioredoxin chromosome CDS2209511 498 + 0.473896
YPO1948 putative cytochrome chromosome CDS2210008 312 + 0.458333
YPO1985 putative glycosyl transferase chromosome CDS2253549 1188 + 0.505892
YPO2003 putative exported protein chromosome CDS2275967 708 + 0.450565
YPO2028 putative exported protein chromosome CDS2299155 876 - 0.430365
YPO2035 hypothetical protein chromosome CDS2305121 831 + 0.527076
YPO2163 putative nitroreductase chromosome CDS2433190 552 + 0.507246
YPO2240 putative membrane protein chromosome CDS2516355 702 - 0.497151
YPO2241 putative exported protein chromosome CDS2517053 630 - 0.495238
YPO2242 putative integral membrane protein chromosome CDS2517692 1056 - 0.507576
YPO2244 putative iron-sulfur binding NADH dehydrogenase chromosome CDS2520273 1863 - 0.521739
YPO2245 putative iron-sulfur protein chromosome CDS2522185 567 - 0.537919
YPO2246 putative membrane protein chromosome CDS2522751 582 - 0.5
YPO2247 putative membrane protein chromosome CDS2523460 444 - 0.468468
YPO2316 putative membrane protein chromosome CDS2605059 555 - 0.445045
YPO2379 NADH:flavin oxidoreductase / NADH oxidase family protein chromosome CDS2671891 1098 + 0.509107
YPO2407 conserved hypothetical protein chromosome CDS2702889 3057 - 0.506706
YPO2461 putative oxidoreductase chromosome CDS2759285 1020 + 0.471569
YPO2492 putative dioxygenase beta subunit chromosome CDS2800214 966 - 0.467909
YPO2496 tartrate dehydrogenase chromosome CDS2804779 1098 - 0.496357
YPO2536 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein chromosome CDS2846500 951 - 0.480547
YPO2577 putative aldehyde dehydrogenase chromosome CDS2896777 1527 + 0.571709
YPO2806 putative aldo/keto reductase chromosome CDS3138485 990 + 0.526263
YPO2863 putative membrane protein chromosome CDS3199551 645 + 0.417054
YPO2969 putative iron-sulphur protein chromosome CDS3317750 570 + 0.522807
YPO2974 putative B-type cytochrome chromosome CDS3321388 525 - 0.466667
YPO2980 putative ion channel protein chromosome CDS3327728 990 + 0.488889
YPO3232 putative exported protein chromosome CDS3598163 948 + 0.407173
YPO3272 putative acetyltransferase chromosome CDS3644013 2643 + 0.521377
YPO3312 glycerol kinase chromosome CDS3693371 1488 - 0.565188
YPO3484 conserved hypothetical protein chromosome CDS3893041 1056 + 0.53125
YPO3637 putative carbohydrate kinase chromosome CDS4057875 1638 + 0.522589
YPO3663 probable zinc-binding dehydrogenase chromosome CDS4083666 978 - 0.522495
YPO3694 putative cytochrome chromosome CDS4128086 387 + 0.483204
YPO3917 putative pyridine nucleotide-disulphide oxidoreductase chromosome CDS4399164 1464 + 0.517076
YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenase chromosome CDS4597877 981 + 0.511723
YPO4106 hypothetical protein chromosome CDS4626524 621 - 0.351047
aceA isocitrate lyase chromosome CDS4169972 1308 - 0.512997
aceB malate synthase A chromosome CDS4171326 1599 - 0.479049
aceE pyruvate dehydrogenase E1 component chromosome CDS3820301 2664 - 0.495871
aceF dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex chromosome CDS3818758 1530 - 0.51634
ackA acetate kinase chromosome CDS2879734 1203 + 0.504572
acnA aconitate hydratase 1 chromosome CDS2496567 2673 + 0.48859
acnB aconitate hydratase 2 chromosome CDS3813160 2598 - 0.51963
adhE aldehyde-alcohol dehydrogenase chromosome CDS2452605 2676 - 0.46861
araB L-ribulokinase chromosome CDS2531746 1704 - 0.53169
astD succinylglutamic semialdehyde dehydrogenase chromosome CDS2230717 1518 + 0.535573
atpA ATP synthase alpha subunit protein chromosome CDS4646123 1542 - 0.499352
atpB ATP synthase subunit B protein chromosome CDS4649048 825 - 0.460606
atpC ATP synthase epsilon subunit protein chromosome CDS4643216 423 - 0.496454
atpD ATP synthase beta subunit protein chromosome CDS4643660 1383 - 0.498192
atpE ATP synthase subunit C protein chromosome CDS4648759 240 - 0.520833
atpF ATP synthase subunit B protein chromosome CDS4648227 471 - 0.492569
atpG ATP synthase gamma subunit protein chromosome CDS4645198 864 - 0.509259
atpH ATP synthase delta subunit protein chromosome CDS4647679 534 - 0.494382
atpI ATP synthase protein I chromosome CDS4649912 384 - 0.46875
betB betaine aldehyde dehydrogenase chromosome CDS1312611 1473 - 0.540394
bisC putative biotin sulfoxide reductas2 chromosome CDS871777 2262 - 0.519894
ccmG thiol:disulfide interchange protein DsbE chromosome CDS3071277 567 + 0.497355
cybB probable cytochrome B561 chromosome CDS3704557 531 + 0.47081
cybC putative cytochrome B562 chromosome CDS3704026 384 + 0.398438
cydA cytochrome D ubiquinol oxidase subunit I chromosome CDS1263985 1569 + 0.474825
cydB cytochrome D ubiquinol oxidase subunit II chromosome CDS1265568 1140 + 0.484211
cydC transport ATP-binding protein chromosome CDS1540073 1725 - 0.515942
cydD transport ATP-binding protein chromosome CDS1541800 1785 - 0.505882
cyoA cytochrome O ubiquinol oxidase subunit II chromosome CDS3527637 957 + 0.447231
cyoB cytochrome O ubiquinol oxidase subunit I chromosome CDS3528598 1992 + 0.49247
cyoC cytochrome O ubiquinol oxidase subunit III chromosome CDS3530579 615 + 0.486179
cyoD cytochrome O ubiquinol oxidase subunit CyoD chromosome CDS3531193 333 + 0.438438
dctA C4-dicarboxylate transport protein chromosome CDS4498350 1290 - 0.467442
ddhD cdp-6-deoxy-delta-3,4-glucoseen reductase chromosome CDS3472384 990 - 0.374747
dld D-lactate dehydrogenase chromosome CDS1325960 1716 - 0.455711
dmsA putative dimethyl sulfoxide reductase chain A protein chromosome CDS3312842 2427 + 0.4726
dmsA anaerobic dimethyl sulfoxide reductase chain A chromosome CDS3707691 2451 - 0.525908
dmsB putative dimethyl sulfoxide reductase chain B protein chromosome CDS3315280 618 + 0.508091
dmsB anaerobic dimethyl sulfoxide reductase chain B chromosome CDS3707062 618 - 0.503236
dsbA secreted thiol:disulfide interchange protein DsbA chromosome CDS21806 624 + 0.421474
dsbD thiol:disulfide interchange protein chromosome CDS354798 1788 - 0.522371
fadI NAD(P)H-flavin reductase chromosome CDS4232347 702 - 0.487179
fdhD putative formate dehydrogenase chromosome CDS4578907 825 + 0.53697
fdhF formate dehydrogenase H chromosome CDS352589 2148 + 0.53352
fdoH formate dehydrogenase-O, iron-sulfur subunit chromosome CDS4574679 972 - 0.539095
fdoI formate dehydrogenase, cytochrome b556 protein chromosome CDS4574008 675 - 0.505185
fdx adrenodoxin family ferredoxin chromosome CDS3234769 336 - 0.514881
fdx putative [4Fe-4S] ferredoxin chromosome CDS3272776 261 + 0.452107
fldA flavodoxin 1 chromosome CDS2964398 528 - 0.471591
fldB flavodoxin 2 chromosome CDS978041 519 + 0.458574
fpr ferredoxin--NADP reductase chromosome CDS98624 747 - 0.52075
frdA fumarate reductase flavoprotein subunit chromosome CDS369111 1824 - 0.529057
frdB fumarate reductase iron-sulfur protein chromosome CDS368384 735 - 0.493878
frdC fumarate reductase hydrophobic protein chromosome CDS367975 393 - 0.480916
frdD fumarate reductase hydrophobic protein chromosome CDS367602 357 - 0.498599
fumA fumarate hydratase, class I chromosome CDS3721374 1644 + 0.508516
fumC fumarate hydratase, class II chromosome CDS2545225 1398 + 0.486409
galT galactose-1-phosphate uridylyltransferase chromosome CDS1284234 1053 - 0.520418
glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A chromosome CDS4292206 1656 - 0.539855
glpC anaerobic glycerol-3-phosphate dehydrogenase subunit C chromosome CDS4289650 1248 - 0.487179
glpD aerobic glycerol-3-phosphate dehydrogenase (partial) chromosome CDS4421260 1422 + 0.524613
glpQ glycerophosphoryl diester phosphodiesterase chromosome CDS4294486 1116 + 0.453405
gltA citrate synthase GltA chromosome CDS1251398 1281 - 0.485558
gltP proton glutamate symport protein chromosome CDS253545 1317 + 0.433561
gor glutathione reductase chromosome CDS4478018 1353 + 0.518108
gpsA glycerol-3-phosphate dehydrogenase chromosome CDS78218 1020 + 0.515686
hcp putative prismane protein homologue chromosome CDS1524958 1653 - 0.507562
hcr putative oxidoreductase chromosome CDS1523822 1023 - 0.531769
hemG protoporphyrinogen oxidase chromosome CDS4223798 534 - 0.428839
hmp flavohemoprotein chromosome CDS3250866 1191 + 0.468514
hpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase chromosome CDS2008260 1398 + 0.527182
hydN 4Fe-4S ferrodoxin chromosome CDS352009 558 + 0.560932
icdA isocitrate dehydrogenase [NADP] chromosome CDS1866223 1254 + 0.460128
ldhA D-lactate dehydrogenase chromosome CDS2620043 993 + 0.460222
leuB 3-isopropylmalate dehydrogenase chromosome CDS575681 1098 - 0.509107
lldD L-lactate dehydrogenase chromosome CDS1788598 1146 + 0.550611
lpdA dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex chromosome CDS3817028 1428 - 0.488095
maeB NADP-dependent malic enzyme chromosome CDS3386611 2286 - 0.512248
mdh malate dehydrogenase chromosome CDS3924779 939 - 0.477103
napA periplasmic nitrate reductase precursor chromosome CDS3391049 2493 - 0.530686
napB cytochrome C-type protein NapB precursor chromosome CDS3390499 456 - 0.513158
napC cytochrome C-type protein NapC chromosome CDS3389872 603 - 0.45937
napF ferredoxin-type protein NapF chromosome CDS3393794 504 - 0.527778
nifJ putative pyruvate-flavodoxin oxidoreductase chromosome CDS2623771 3534 + 0.509904
nifU NifU family protein chromosome CDS3238530 387 - 0.465116
nirB nitrite reductase chromosome CDS174985 2547 - 0.516294
nqrA NADH-ubiquinone oxidoreductase subunit A chromosome CDS3605156 1344 - 0.512649
nqrB NADH-ubiquinone oxidoreductase subunit B chromosome CDS3603911 1242 - 0.491948
nqrC Na+-translocating NADH-quinone reductase subunit C chromosome CDS3603121 801 - 0.496879
nqrD Na+-translocating NADH-quinone reductase subunit D chromosome CDS3602499 630 - 0.465079
nqrE Na+-translocating NADH-quinone reductase subunit E chromosome CDS3601896 597 - 0.479062
nqrF NADH-uniquinone oxidoreductase subunit F chromosome CDS3600657 1224 - 0.455065
nuoA NADH dehydrogenase I chain A chromosome CDS2869843 495 - 0.49899
nuoB NADH dehydrogenase I chain B chromosome CDS2869064 678 - 0.50295
nuoD NADH dehydrogenase I chain C/D chromosome CDS2867127 1797 - 0.514747
nuoE NADH dehydrogenase I chain E chromosome CDS2866561 519 - 0.55106
nuoF NADH dehydrogenase I chain F chromosome CDS2865179 1386 - 0.538961
nuoG NADH dehydrogenase I chain G chromosome CDS2862348 2745 - 0.542077
nuoH NADH dehydrogenase I chain H chromosome CDS2861374 978 - 0.51636
nuoI NADH Dehydrogenase I chain I chromosome CDS2860817 543 - 0.517495
nuoJ NADH dehydrogenase I chain J chromosome CDS2860259 546 - 0.516484
nuoK NADH dehydrogenase i chain k chromosome CDS2859960 303 - 0.551155
nuoL NADH dehydrogenase I chain L chromosome CDS2858119 1845 - 0.542005
nuoM NADH dehydrogenase I chain M chromosome CDS2856547 1533 - 0.514025
nuoN NADH dehydrogenase I chain N chromosome CDS2855077 1464 - 0.538251
pckA phosphoenolpyruvate carboxykinase [ATP] chromosome CDS150898 1620 - 0.496296
pflB formate acetyltransferase 1 chromosome CDS1558055 2283 - 0.480508
pntA NAD(P) transhydrogenase alpha subunit chromosome CDS2590044 1527 - 0.513425
pntB NAD(P) transhydrogenase subunit beta chromosome CDS2588577 1395 - 0.481004
ppa inorganic pyrophosphatase chromosome CDS3930365 528 + 0.467803
ppc phosphoenolpyruvate carboxylase chromosome CDS4414193 2637 + 0.525597
prk phosphoribulokinase 1 chromosome CDS197182 870 - 0.495402
putA bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate chromosome CDS2094664 3972 - 0.527946
qor quinone oxidoreductase chromosome CDS325182 984 - 0.541667
sdhA succinate dehydrogenase flavoprotein subunit chromosome CDS1254119 1767 + 0.512733
sdhB succinate dehydrogenase iron-sulfur protein chromosome CDS1255935 717 + 0.467225
sdhC succinate dehydrogenase cytochrome b-556 subunit chromosome CDS1253388 390 + 0.458974
sdhD succinate dehydrogenase hydrophobic membrane anchor protein chromosome CDS1253771 348 + 0.456897
sfcA NAD-dependent malic enzyme chromosome CDS1716556 1698 - 0.482332
ssuD alkanesulfonate monooxygenase chromosome CDS4042564 1149 + 0.543951
sthA soluble pyridine nucleotide transhydrogenase chromosome CDS4395891 1401 + 0.484654
sucA 2-oxoglutarate dehydrogenase E1 component chromosome CDS1257007 2808 + 0.49359
sucB dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex chromosome CDS1259844 1224 + 0.487745
sucC succinyl-CoA synthetase beta chain chromosome CDS1261180 1167 + 0.509854
sucD succinyl-CoA synthetase alpha chain chromosome CDS1262346 873 + 0.4811
tas putative aldo/keto reductase-family protein chromosome CDS865946 1041 + 0.501441
trxA thioredoxin 1 chromosome CDS4343502 327 - 0.461774
trxC thioredoxin 2 chromosome CDS3642614 438 + 0.502283
ubiF putative2-octaprenyl-3-methyl-6-methoxy-1,4-benz oquinolhydroxylase chromosome CDS2944454 1182 + 0.534687
ubiH 2-octaprenyl-6-methoxyphenol hydroxylase chromosome CDS998045 1179 - 0.550466
ugpQ glycerophosphoryl diester phosphodiesterase chromosome CDS4257600 750 - 0.545333
visC putative monooxygenase chromosome CDS996652 1221 - 0.54955