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2024-05-19 14:33:04

Gene list

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COG category: Unclassified
Genomic element: pCD1

Number of genes found: 36

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pCD12 hypothetial proteinpCD1 CDS6747 450 + 0.451111
NA pCD91 hypothetical proteinpCD1 CDS62716 465 - 0.301075
NA pCD10 hypothetical proteinpCD1 CDS5934 243 + 0.539095
NA pCD90 hypothetical proteinpCD1 CDS62248 330 - 0.281818
NA pCD59 hypothetical proteinpCD1 CDS42691 210 + 0.428571
NA pCD64 hypothetical proteinpCD1 CDS45633 420 - 0.388095
NA pCD65 hypothetical proteinpCD1 CDS46324 390 + 0.276923
NA pCD09 hypothetical proteinpCD1 CDS5416 219 - 0.488584
NA pCD80 hypothetical proteinpCD1 CDS56176 297 - 0.373737
NA pCD84 hypothetical proteinpCD1 CDS58463 216 - 0.49537
NA pCD62 hypothetical proteinpCD1 CDS44639 120 - 0.475
NA pCD76 hypothetical proteinpCD1 CDS54686 249 + 0.502008
lcrR pCD50 hypothetical protein LcrRpCD1 CDS37189 441 + 0.489796
lcrV pCD52 V antigen LcrVpCD1 CDS37960 975 + 0.377436
repA pCD08 replication protein RepA-like proteinpCD1 CDS3723 867 + 0.542099
sycE pCD82 putative yopE chaperone SycEpCD1 CDS57327 393 + 0.409669
sycH pCD87 putative yopH targeting protein SycHpCD1 CDS60476 426 + 0.41784
sycN pCD46 putative type III secretion protein SycNpCD1 CDS34014 372 + 0.526882
sycT pCD66 putative yopT chaperone SycTpCD1 CDS46757 399 - 0.411028
tap pCD07 putative repA translation proteinpCD1 CDS3656 75 + 0.44
tyeA pCD45 Yop secretion and targeting control protein TyeApCD1 CDS33749 279 + 0.433692
virG pCD35 putative Yop targeting lipoprotein VirGpCD1 CDS24887 396 - 0.444444
yopE pCD81 putative outer membrane virulence protein YopEpCD1 CDS56474 660 - 0.510606
yopH pCD17 putative protein-tyrosine phosphatase Yop effector YopHpCD1 CDS12347 1407 + 0.474058
yopJ pCD14 putative targeted effector protein YopJpCD1 CDS9798 867 + 0.346021
yopN pCD44 putative membrane-bound Yop targeting protein YopNpCD1 CDS32887 882 + 0.460317
yopQ pCD68 putative virulence determinant protein YopQpCD1 CDS48608 564 + 0.336879
yopT pCD67 putative cytotoxic effector protein YopTpCD1 CDS47155 969 - 0.431373
yscA pCD33 hypothetical protein YscApCD1 CDS23771 99 - 0.313131
yscE pCD29 putative type III secretion protein YscEpCD1 CDS19850 201 - 0.422886
yscF pCD28 putative type III secretion protein YscFpCD1 CDS19586 264 - 0.416667
yscG pCD27 putative type III secretion protein YscGpCD1 CDS19237 348 - 0.439655
yscK pCD23 putative type III secretion protein YscKpCD1 CDS17025 651 - 0.483871
yscO pCD42 putative type III secretion protein YscOpCD1 CDS30909 465 - 0.458065
yscP pCD41 putative type III secretion protein YscPpCD1 CDS29542 1368 - 0.486842
yscX pCD47 putative type III secretion protein YscXpCD1 CDS34382 369 + 0.495935