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2024-05-18 22:09:40

Gene list

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COG category: Unclassified
Genomic element: pDC3000A

Number of genes found: 33

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPTOA0028 mobilization protein MobB, putativepDC3000A CDS27399 330 + 0.506061
NA PSPTOA0023 hypothetical proteinpDC3000A CDS24612 351 - 0.652422
NA PSPTOA0065 exclusion-determining protein, putativepDC3000A CDS66269 651 + 0.517665
NA PSPTOA0041 lipoprotein, putativepDC3000A CDS42480 273 + 0.611722
NA PSPTOA0038 hypothetical proteinpDC3000A CDS40825 186 + 0.403226
NA PSPTOA0024 hypothetical proteinpDC3000A CDS25096 378 + 0.555556
NA PSPTOA0025 conserved hypothetical proteinpDC3000A CDS25520 837 + 0.561529
NA PSPTOA0033 hypothetical proteinpDC3000A CDS34296 399 + 0.556391
NA PSPTOA0058 conserved hypothetical proteinpDC3000A CDS57568 201 - 0.567164
NA PSPTOA0070 hypothetical proteinpDC3000A CDS72068 624 + 0.591346
NA PSPTOA0007 membrane protein, putativepDC3000A CDS7782 474 - 0.506329
NA PSPTOA0022 hypothetical proteinpDC3000A CDS24081 582 + 0.541237
NA PSPTOA0043 traH protein, putativepDC3000A CDS43283 474 + 0.618143
NA PSPTOA0026 conserved hypothetical proteinpDC3000A CDS26414 189 + 0.52381
NA PSPTOA0046 hypothetical proteinpDC3000A CDS46304 210 + 0.571429
NA PSPTOA0015 conserved hypothetical proteinpDC3000A CDS18277 219 + 0.502283
NA PSPTOA0027 mobilization protein MobC, putativepDC3000A CDS26676 279 - 0.537634
HopX1 PSPTOA0012 type III effector HopX1pDC3000A CDS14914 1155 - 0.537662
hopAM1-1 PSPTOA0005 type III effector HopAM1-1pDC3000A CDS5731 831 - 0.397112
hopT1-1 PSPTOA0019 type III effector HopT1-1pDC3000A CDS21259 1137 + 0.51803
shcO1 PSPTOA0017 type III chaperone ShcO1pDC3000A CDS19718 429 + 0.547786
traI PSPTOA0044 relaxasepDC3000A CDS43753 801 + 0.600499
traK-2 PSPTOA0048 traK proteinpDC3000A CDS47372 288 + 0.583333
traL-2 PSPTOA0050 traL proteinpDC3000A CDS52006 354 + 0.601695
traM-2 PSPTOA0051 traM proteinpDC3000A CDS52356 708 + 0.576271
traN-2 PSPTOA0052 traN proteinpDC3000A CDS53120 1059 + 0.616619
traP-2 PSPTOA0054 traP proteinpDC3000A CDS55584 666 + 0.599099
traQ-2 PSPTOA0055 traQ proteinpDC3000A CDS56258 543 + 0.59116
traR-2 PSPTOA0056 traR proteinpDC3000A CDS56876 396 + 0.55303
traT PSPTOA0059 traT proteinpDC3000A CDS57953 660 + 0.622727
traU-2 PSPTOA0060 traU proteinpDC3000A CDS58596 3048 + 0.59416
traX-2 PSPTOA0063 traX proteinpDC3000A CDS63150 603 + 0.583748
trbA PSPTOA0066 trbA proteinpDC3000A CDS67012 1200 + 0.589167