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2024-05-18 23:02:03

Gene list

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COG category: Unclassified
Genomic element: pDC3000B

Number of genes found: 40

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPTO_B0053 hypothetical proteinpDC3000B CDS41038 696 + 0.556035
NA PSPTO_B0037 hypothetical proteinpDC3000B CDS30519 210 + 0.504762
NA PSPTO_B0008 ISPsy3, transposase, internal deletionpDC3000B CDS8099 258 - 0.596899
NA PSPTO_B0003 conserved hypothetical proteinpDC3000B CDS3277 474 + 0.447257
NA PSPTO_B0047 hypothetical proteinpDC3000B CDS37460 309 + 0.511327
NA PSPTO_B0071 surface exclusion protein, putativepDC3000B CDS60947 648 + 0.520062
NA PSPTO_B0023 hypothetical proteinpDC3000B CDS22410 222 + 0.518018
NA PSPTO_B0028 hypothetical proteinpDC3000B CDS24916 276 - 0.673913
NA PSPTO_B0032 mobC proteinpDC3000B CDS26950 279 - 0.541219
NA PSPTO_B0050 traH protein, putativepDC3000B CDS38589 474 + 0.618143
NA PSPTO_B0072 conserved hypothetical proteinpDC3000B CDS61687 1203 + 0.58936
NA PSPTO_B0002 ISPsy3, transposasepDC3000B CDS1841 1230 - 0.580488
NA PSPTO_B0006 hypothetical proteinpDC3000B CDS7250 129 - 0.612403
NA PSPTO_B0051 traI proteinpDC3000B CDS39059 801 + 0.600499
NA PSPTO_B0030 conserved hypothetical proteinpDC3000B CDS25779 837 + 0.568698
NA PSPTO_B0070 hypothetical proteinpDC3000B CDS60678 273 + 0.538462
NA PSPTO_B0029 hypothetical proteinpDC3000B CDS25478 255 + 0.580392
NA PSPTO_B0074 conserved hypothetical proteinpDC3000B CDS63253 201 - 0.562189
NA PSPTO_B0027 hypothetical proteinpDC3000B CDS24479 417 + 0.57554
NA PSPTO_B0001 RepA protein, putativepDC3000B CDS350 1374 + 0.588064
NA PSPTO_B0016 conserved domain proteinpDC3000B CDS16446 354 + 0.570621
NA PSPTO_B0035 mobilization protein MobB, putativepDC3000B CDS28130 330 + 0.506061
NA PSPTO_B0020 hypothetical proteinpDC3000B CDS19504 948 - 0.537975
NA PSPTO_B0044 hypothetical proteinpDC3000B CDS36137 186 + 0.370968
NA PSPTO_B0048 lipoprotein, putativepDC3000B CDS37786 273 + 0.611722
NA PSPTO_B0034 hypothetical proteinpDC3000B CDS27526 345 - 0.521739
NA PSPTO_B0015 hypothetical proteinpDC3000B CDS16128 297 + 0.498316
NA PSPTO_B0007 PilM protein, putativepDC3000B CDS7588 441 + 0.539683
NA PSPTO_B0033 hypothetical proteinpDC3000B CDS27272 282 - 0.478723
NA PSPTO_B0031 conserved hypothetical proteinpDC3000B CDS26683 201 + 0.492537
NA PSPTO_B0055 hypothetical proteinpDC3000B CDS42318 246 + 0.565041
traL-1 PSPTO_B0058 traL proteinpDC3000B CDS47621 354 + 0.601695
traM-1 PSPTO_B0059 traM proteinpDC3000B CDS48001 678 + 0.578171
traN-1 PSPTO_B0060 traN proteinpDC3000B CDS48735 1059 + 0.616619
traP-1 PSPTO_B0062 traP proteinpDC3000B CDS51154 711 + 0.594937
traQ-1 PSPTO_B0063 traQ proteinpDC3000B CDS51873 543 + 0.59116
traR-1 PSPTO_B0064 traR proteinpDC3000B CDS52485 402 + 0.552239
traU-1 PSPTO_B0066 traU proteinpDC3000B CDS53554 3057 + 0.595028
traX-1 PSPTO_B0068 traX proteinpDC3000B CDS57825 603 + 0.58209
traY-1 PSPTO_B0069 traY proteinpDC3000B CDS58458 2145 + 0.565035