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2024-05-26 14:50:42

Gene list

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COG category: Unclassified
Genomic element: pPBPR1

Number of genes found: 36

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRC0031 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS38487 582 - 0.412371
NA PBPRC0005 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS2651 735 + 0.533333
NA PBPRC0004 hypothetical sex pilus assembly and synthesis protein (TraE)pPBPR1 CDS2007 648 + 0.507716
NA PBPRC0038 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS47819 417 - 0.386091
NA PBPRC0002 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS917 285 - 0.396491
NA PBPRC0011 putative sex pilus assembly and synthesis protein (TraU) [Photobacterium profundum SS9]pPBPR1 CDS9108 1005 + 0.510448
NA PBPRC0058 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS70380 1035 - 0.330435
NA PBPRC0028 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS36432 348 - 0.554598
NA PBPRC0041 unknown protein [Photobacterium profundum SS9]pPBPR1 CDS51581 288 + 0.40625
NA PBPRC0012 hypothetical conjugative transfer protein trbC [Photobacterium profundum SS9]pPBPR1 CDS10303 705 + 0.50922
NA PBPRC0020 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS21670 495 + 0.454545
NA PBPRC0024 Predicted orfpPBPR1 CDS30909 459 - 0.394336
NA PBPRC0003 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS1503 273 + 0.564103
NA PBPRC0047 Predicted orfpPBPR1 CDS59286 309 - 0.417476
NA PBPRC0067 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS79373 285 + 0.340351
NA PBPRC0065 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS77016 276 + 0.358696
NA PBPRC0046 Predicted orfpPBPR1 CDS58879 264 + 0.344697
NA PBPRC0013 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS11009 1803 + 0.499168
NA PBPRC0056 Predicted orfpPBPR1 CDS67811 324 - 0.422839
NA PBPRC0061 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS73628 651 + 0.356375
NA PBPRC0066 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS77981 894 - 0.47651
NA PBPRC0037 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS46753 1026 - 0.41423
NA PBPRC0051 Predicted orfpPBPR1 CDS63001 306 - 0.388889
NA PBPRC0045 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS57943 297 - 0.427609
NA PBPRC0010 hypothetical sex pilus assembly and synthesis protein (TraW) [Photobacterium profundum SS9]pPBPR1 CDS8406 699 + 0.496423
NA PBPRC0006 putative sex pilus assembly and synthesis protein (TraB) [Photobacterium profundum SS9]pPBPR1 CDS3379 1470 + 0.520408
NA PBPRC0039 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS48251 549 - 0.398907
NA PBPRC0007 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS4860 396 + 0.525253
NA PBPRC0048 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS59613 360 - 0.358333
NA PBPRC0036 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS46078 663 - 0.408748
NA PBPRC0016 putative sex pilus assembly and mating pair (TraG) [Photobacterium profundum SS9]pPBPR1 CDS15384 2835 + 0.507584
NA PBPRC0032 Predicted orfpPBPR1 CDS39908 294 - 0.540816
NA PBPRC0009 Predicted orfpPBPR1 CDS7943 417 - 0.489209
NA PBPRC0023 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS29463 387 - 0.405685
NA PBPRC0021 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS22182 1161 - 0.541774
NA PBPRC0014 hypothetical sex pilus assembly and synthesis protein (TraF) [Photobacterium profundum SS9]pPBPR1 CDS12808 792 + 0.518939