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2024-05-16 02:52:19

Gene list

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COG category: Unclassified
Genomic element: pYV

Number of genes found: 42

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pYV0083 yscG; putative type III secretion proteinpYV CDS58549 348 + 0.442529
NA pYV0045 hypothetical proteinpYV CDS32524 192 - 0.458333
NA pYV0029 hypothetical proteinpYV CDS22359 174 + 0.471264
NA pYV0048 hypothetical proteinpYV CDS35009 96 - 0.40625
NA pYV0053 hypothetical proteinpYV CDS36160 168 + 0.428571
NA pYV0044 hypothetical proteinpYV CDS31576 420 + 0.388095
NA pYV0075 virG; putative Yop targeting lipoproteinpYV CDS52851 396 + 0.444444
NA pYV0082 yscF; putative type III secretion proteinpYV CDS58284 264 + 0.416667
NA pYV0096 transposase, IS630 familypYV CDS66692 129 - 0.434109
NA pYV0059 lcrR; hypothetical protein lcrRpYV CDS40503 441 - 0.489796
NA pYV0020 sycH; putative yopH targeting proteinpYV CDS16714 426 - 0.41784
NA pYV0025 putative outer membrane virulence proteinpYV CDS20483 660 + 0.510606
NA pYV0094 yopH; putative protein-tyrosine phosphatase Yop effectorpYV CDS64367 1407 - 0.474058
NA pYV0030 hypothetical proteinpYV CDS22682 294 - 0.5
NA pYV0064 tyeA; putative Yop secretion and targeting proteinpYV CDS44105 279 - 0.433692
NA pYV0033 hypothetical proteinpYV CDS25800 114 + 0.561404
NA pYV0024 sycE, yerA; putative yopE chaperonepYV CDS19897 393 - 0.409669
NA pYV0098 yopP, yopJ; putative targeted effector proteinpYV CDS67276 867 - 0.346021
NA pYV0066 hypothetical proteinpYV CDS45305 105 + 0.390476
NA pYV0040 yop targeting protein yopK, yopQpYV CDS28491 549 - 0.333333
NA pYV0081 yscE; putative type III secretion proteinpYV CDS58083 201 + 0.422886
NA pYV0042 yopT chaperonepYV CDS30481 393 + 0.414758
NA pYV0087 yscK; putative type III secretion proteinpYV CDS60458 651 + 0.482335
NA pYV0077 hypothetical proteinpYV CDS54264 99 + 0.323232
NA pYV0006 hypothetical proteinpYV CDS5803 153 + 0.490196
NA pYV0050 hypothetical proteinpYV CDS35445 123 + 0.463415
NA pYV0004 hypothetical proteinpYV CDS3411 240 - 0.504167
NA pYV0065 yopN, lcrE; putative membrane-bound Yop targeting proteinpYV CDS44364 882 - 0.460317
NA pYV0084 yscH, yopR, lcrP; putative type III secretion proteinpYV CDS58893 498 + 0.427711
NA pYV0012 hypothetical proteinpYV CDS8771 210 - 0.447619
NA pYV0043 possible transposase remnantpYV CDS31368 192 + 0.458333
NA pYV0063 sycN; putative type III secretion proteinpYV CDS43747 372 - 0.524194
NA pYV0041 yop targeted effector yopTpYV CDS29513 969 + 0.430341
NA pYV0052 hypothetical proteinpYV CDS35951 123 + 0.479675
NA pYV0049 hypothetical proteinpYV CDS35209 216 - 0.430556
NA pYV0062 yscX; putative type III secretion proteinpYV CDS43382 369 - 0.495935
NA pYV0005 repA, repA1; putative replication initiation proteinpYV CDS4823 879 - 0.5438
NA pYV0068 yscO; putative type III secretion proteinpYV CDS46759 465 + 0.455914
NA pYV0002 hypothetical proteinpYV CDS2218 450 - 0.453333
NA pYV0097 hypothetical proteinpYV CDS66903 93 - 0.387097
NA pYV0099 hypothetical proteinpYV CDS68143 135 - 0.392593
NA pYV0069 yscP; putative type III secretion proteinpYV CDS47223 1248 + 0.489583