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2024-05-25 09:50:51

Gene list

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COG category: Unclassified
Genomic element: megaplasmid pHG1

Number of genes found: 183

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Cupriavidus necator, H16
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PHG087 putative transposasemegaplasmid pHG1 CDS78711 654 + 0.643731
NA PHG313 hypothetical proteinmegaplasmid pHG1 CDS327728 252 - 0.615079
NA PHG391 reverse transcriptasemegaplasmid pHG1 CDS410486 129 + 0.627907
NA PHG279 putative invertasemegaplasmid pHG1 CDS300811 201 - 0.641791
NA PHG358 conserved hypothetical proteinmegaplasmid pHG1 CDS372042 651 - 0.615975
NA PHG138 conserved hypothetical proteinmegaplasmid pHG1 CDS134827 525 + 0.59619
NA PHG162 hypothetical proteinmegaplasmid pHG1 CDS160981 147 + 0.666667
NA PHG055 hypothetical proteinmegaplasmid pHG1 CDS51196 117 - 0.641026
NA PHG110 conserved hypothetical proteinmegaplasmid pHG1 CDS104078 2499 + 0.611044
NA PHG196 conserved hypothetical proteinmegaplasmid pHG1 CDS217291 375 - 0.581333
NA PHG350 conserved hypothetical proteinmegaplasmid pHG1 CDS364508 516 - 0.705426
NA PHG290 conserved hypothetical proteinmegaplasmid pHG1 CDS308301 516 - 0.612403
NA PHG190 conserved hypothetical proteinmegaplasmid pHG1 CDS213179 615 + 0.6
NA PHG299 conserved hypothetical proteinmegaplasmid pHG1 CDS315017 969 - 0.629515
NA PHG331 conserved hypothetical proteinmegaplasmid pHG1 CDS346566 552 + 0.652174
NA PHG340 conserved hypothetical proteinmegaplasmid pHG1 CDS354361 924 + 0.636364
NA PHG207 putative transposasemegaplasmid pHG1 CDS226859 477 - 0.647799
NA PHG163 conserved hypothetical proteinmegaplasmid pHG1 CDS166940 1455 + 0.59244
NA PHG260 hypothetical proteinmegaplasmid pHG1 CDS276130 93 + 0.698925
NA PHG369 conserved hypothetical proteinmegaplasmid pHG1 CDS383066 618 + 0.613269
NA PHG206 conserved hypothetical proteinmegaplasmid pHG1 CDS226325 201 + 0.587065
NA PHG112 putative transposasemegaplasmid pHG1 CDS110264 672 - 0.578869
NA PHG004 unknownmegaplasmid pHG1 CDS3899 306 + 0.591503
NA PHG284 hypothetical proteinmegaplasmid pHG1 CDS302402 420 + 0.664286
NA PHG317 conserved hypothetical proteinmegaplasmid pHG1 CDS332839 483 - 0.639752
NA PHG282 hypothetical proteinmegaplasmid pHG1 CDS301962 219 + 0.652968
NA PHG182 conserved hypothetical proteinmegaplasmid pHG1 CDS201720 696 - 0.590517
NA PHG263 conserved hypothetical proteinmegaplasmid pHG1 CDS277765 1338 - 0.719731
NA PHG230 probable alcohol dehydrogenasemegaplasmid pHG1 CDS246178 426 + 0.694836
NA PHG298 hypothetical proteinmegaplasmid pHG1 CDS314380 597 - 0.557789
NA PHG154 hypothetical proteinmegaplasmid pHG1 CDS154253 171 - 0.54386
NA PHG139 hypothetical proteinmegaplasmid pHG1 CDS135254 159 + 0.591195
NA PHG285 hypothetical proteinmegaplasmid pHG1 CDS302818 387 + 0.625323
NA PHG333 hypothetical proteinmegaplasmid pHG1 CDS347404 207 - 0.589372
NA PHG098 hypothetical proteinmegaplasmid pHG1 CDS90940 219 - 0.575342
NA PHG379 hypothetical proteinmegaplasmid pHG1 CDS399671 294 + 0.670068
NA PHG050 putative hydrogenase-specific proteasemegaplasmid pHG1 CDS46010 318 + 0.493711
NA PHG393 putative muconolactone isomerasemegaplasmid pHG1 CDS412022 108 - 0.648148
NA PHG193 conserved hypothetical proteinmegaplasmid pHG1 CDS215214 429 + 0.65035
NA PHG233 conserved hypothetical proteinmegaplasmid pHG1 CDS249125 513 + 0.631579
NA PHG191 conserved hypothetical proteinmegaplasmid pHG1 CDS213786 480 + 0.610417
NA PHG061 putative transposasemegaplasmid pHG1 CDS57725 321 - 0.604361
NA PHG127 conserved hypothetical proteinmegaplasmid pHG1 CDS126956 321 + 0.610592
NA PHG029 putative transposasemegaplasmid pHG1 CDS29266 330 - 0.630303
NA PHG309 conserved hypothetical proteinmegaplasmid pHG1 CDS323612 1140 - 0.609649
NA PHG326 conserved hypothetical proteinmegaplasmid pHG1 CDS341141 591 + 0.646362
NA PHG115 conserved hypothetical proteinmegaplasmid pHG1 CDS111612 789 + 0.583016
NA PHG155 hypothetical proteinmegaplasmid pHG1 CDS156058 180 + 0.744444
NA PHG148 conserved hypothetical proteinmegaplasmid pHG1 CDS144890 771 + 0.59144
NA PHG108 conserved hypothetical proteinmegaplasmid pHG1 CDS102223 531 + 0.700565
NA PHG308 conserved hypothetical proteinmegaplasmid pHG1 CDS322877 726 - 0.62259
NA PHG304 hypothetical proteinmegaplasmid pHG1 CDS319797 405 - 0.592593
NA PHG337 conserved hypothetical proteinmegaplasmid pHG1 CDS350382 429 - 0.575758
NA PHG124 putative siderophore biosynthesis proteinmegaplasmid pHG1 CDS121195 1818 - 0.690869
NA PHG059 putative integrase/recombinasemegaplasmid pHG1 CDS54781 1437 - 0.628392
NA PHG281 hypothetical proteinmegaplasmid pHG1 CDS301471 513 + 0.666667
NA PHG132 conserved hypothetical proteinmegaplasmid pHG1 CDS130670 525 - 0.59619
NA PHG173 hypothetical proteinmegaplasmid pHG1 CDS187329 249 - 0.606426
NA PHG234 conserved hypothetical proteinmegaplasmid pHG1 CDS249771 300 + 0.603333
NA PHG336 conserved hypothetical proteinmegaplasmid pHG1 CDS349588 786 - 0.627226
NA PHG128 putative transposition proteinmegaplasmid pHG1 CDS127980 141 - 0.595745
NA PHG297 conserved hypothetical proteinmegaplasmid pHG1 CDS313872 411 + 0.618005
NA PHG324 conserved hypothetical proteinmegaplasmid pHG1 CDS338446 1122 + 0.64795
NA PHG085 putative transposasemegaplasmid pHG1 CDS78253 222 - 0.648649
NA PHG181 conserved hypothetical proteinmegaplasmid pHG1 CDS200355 711 + 0.61744
NA PHG300 conserved hypothetical proteinmegaplasmid pHG1 CDS316445 1557 - 0.642903
NA PHG367 conserved hypothetical proteinmegaplasmid pHG1 CDS382287 507 + 0.591716
NA PHG035 putative integrase/recombinasemegaplasmid pHG1 CDS32075 225 + 0.564444
NA PHG259 conserved hypothetical proteinmegaplasmid pHG1 CDS275593 450 + 0.666667
NA PHG294 hypothetical proteinmegaplasmid pHG1 CDS312311 369 - 0.528455
NA PHG071 hypothetical proteinmegaplasmid pHG1 CDS66753 102 + 0.539216
NA PHG188 conserved hypothetical proteinmegaplasmid pHG1 CDS210430 1218 + 0.601806
NA PHG180 H-NS-like proteinmegaplasmid pHG1 CDS196965 312 + 0.583333
NA PHG179 conserved hypothetical proteinmegaplasmid pHG1 CDS195857 198 - 0.60101
NA PHG166 conserved hypothetical proteinmegaplasmid pHG1 CDS176174 312 - 0.458333
NA PHG295 hypothetical proteinmegaplasmid pHG1 CDS312816 381 + 0.587927
NA PHG293 hypothetical proteinmegaplasmid pHG1 CDS311827 435 + 0.643678
NA PHG051 putative transposasemegaplasmid pHG1 CDS46356 534 - 0.634831
NA PHG174 hypothetical proteinmegaplasmid pHG1 CDS188352 429 - 0.552448
NA PHG069 hypothetical proteinmegaplasmid pHG1 CDS64740 1431 + 0.691824
NA PHG143 conserved hypothetical proteinmegaplasmid pHG1 CDS139184 210 + 0.633333
NA PHG311 conserved hypothetical proteinmegaplasmid pHG1 CDS325077 441 - 0.623583
NA PHG052 hypothetical proteinmegaplasmid pHG1 CDS47083 363 - 0.636364
NA PHG086 putative transposasemegaplasmid pHG1 CDS78351 762 - 0.681102
NA PHG111 conserved hypothetical proteinmegaplasmid pHG1 CDS106905 1059 - 0.613787
NA PHG342 conserved hypothetical proteinmegaplasmid pHG1 CDS355833 1086 + 0.588398
NA PHG303 hypothetical proteinmegaplasmid pHG1 CDS319237 300 - 0.653333
NA PHG320 hypothetical proteinmegaplasmid pHG1 CDS334374 540 + 0.627778
NA PHG147 conserved hypothetical proteinmegaplasmid pHG1 CDS144004 759 + 0.612648
NA PHG318 hypothetical proteinmegaplasmid pHG1 CDS333437 171 + 0.573099
NA PHG239 conserved hypothetical proteinmegaplasmid pHG1 CDS253274 201 - 0.636816
NA PHG330 conserved hypothetical proteinmegaplasmid pHG1 CDS345557 999 + 0.633634
NA PHG097 hypothetical proteinmegaplasmid pHG1 CDS89391 1191 + 0.586062
NA PHG365 conserved hypothetical proteinmegaplasmid pHG1 CDS379162 1257 + 0.642005
NA PHG049 putative transposasemegaplasmid pHG1 CDS45699 291 - 0.621993
NA PHG322 conserved hypothetical proteinmegaplasmid pHG1 CDS336384 1230 + 0.654472
NA PHG068 hypothetical proteinmegaplasmid pHG1 CDS64096 648 + 0.679012
NA PHG377 hypothetical proteinmegaplasmid pHG1 CDS398106 426 + 0.685446
NA PHG150 conserved hypothetical proteinmegaplasmid pHG1 CDS147471 747 - 0.65328
NA PHG104 hypothetical proteinmegaplasmid pHG1 CDS97479 1314 + 0.638508
NA PHG292 conserved hypothetical proteinmegaplasmid pHG1 CDS310551 1290 - 0.62093
NA PHG301 hypothetical proteinmegaplasmid pHG1 CDS318066 390 - 0.666667
NA PHG224 hypothetical proteinmegaplasmid pHG1 CDS241747 339 - 0.619469
NA PHG142 putative transposase, IS66 familymegaplasmid pHG1 CDS137742 1449 - 0.63216
NA PHG100 unknownmegaplasmid pHG1 CDS93039 1326 + 0.595777
NA PHG319 conserved hypothetical proteinmegaplasmid pHG1 CDS333783 522 - 0.641762
NA PHG344 hypothetical proteinmegaplasmid pHG1 CDS358776 480 - 0.679167
NA PHG339 hypothetical proteinmegaplasmid pHG1 CDS353078 1173 + 0.588235
NA PHG410 hypothetical proteinmegaplasmid pHG1 CDS429511 288 + 0.569444
NA PHG316 hypothetical proteinmegaplasmid pHG1 CDS331937 786 - 0.643766
NA PHG053 conserved hypothetical proteinmegaplasmid pHG1 CDS47442 1881 - 0.619883
NA PHG054 hypothetical proteinmegaplasmid pHG1 CDS49319 1881 - 0.62201
NA PHG102 hypothetical proteinmegaplasmid pHG1 CDS95015 1350 + 0.612593
NA PHG341 hypothetical proteinmegaplasmid pHG1 CDS355339 333 + 0.597598
NA PHG175 conserved hypothetical proteinmegaplasmid pHG1 CDS189016 924 - 0.606061
NA PHG315 hypothetical proteinmegaplasmid pHG1 CDS331167 708 - 0.634181
NA PHG195 hypothetical proteinmegaplasmid pHG1 CDS216455 390 + 0.661538
NA PHG236 conserved hypothetical proteinmegaplasmid pHG1 CDS250867 1293 - 0.680588
NA PHG199 conserved hypothetical proteinmegaplasmid pHG1 CDS220000 243 + 0.526749
NA PHG413 hypothetical proteinmegaplasmid pHG1 CDS433731 240 + 0.604167
NA PHG307 conserved hypothetical proteinmegaplasmid pHG1 CDS322239 642 - 0.647975
NA PHG066 conserved hypothetical proteinmegaplasmid pHG1 CDS62866 579 + 0.689119
NA PHG368 conserved hypothetical proteinmegaplasmid pHG1 CDS382768 297 + 0.653199
NA PHG302 conserved hypothetical proteinmegaplasmid pHG1 CDS318755 471 - 0.59448
NA PHG378 hypothetical proteinmegaplasmid pHG1 CDS399309 231 + 0.61039
NA PHG117 hypothetical proteinmegaplasmid pHG1 CDS115787 255 - 0.698039
NA PHG161 hypothetical proteinmegaplasmid pHG1 CDS159765 1191 + 0.65911
NA PHG103 hypothetical proteinmegaplasmid pHG1 CDS96368 981 + 0.601427
NA PHG131 hypothetical proteinmegaplasmid pHG1 CDS130609 159 - 0.591195
NA PHG198 hypothetical proteinmegaplasmid pHG1 CDS219089 417 - 0.635492
NA PHG194 conserved hypothetical proteinmegaplasmid pHG1 CDS215642 468 + 0.643162
NA PHG060 putative transposasemegaplasmid pHG1 CDS56242 456 - 0.60307
NA PHG332 hypothetical proteinmegaplasmid pHG1 CDS347195 132 + 0.530303
NA PHG114 conserved hypothetical proteinmegaplasmid pHG1 CDS110971 645 + 0.555039
NA PHG288 hypothetical proteinmegaplasmid pHG1 CDS305597 198 - 0.611111
NA PHG197 conserved hypothetical proteinmegaplasmid pHG1 CDS218450 573 - 0.579407
NA PHG177 putative histone-like proteinmegaplasmid pHG1 CDS193385 459 + 0.620915
NA PHG192 hypothetical proteinmegaplasmid pHG1 CDS214377 501 + 0.59481
NA PHG144 conserved hypothetical proteinmegaplasmid pHG1 CDS139222 351 - 0.612536
NA PHG310 conserved hypothetical proteinmegaplasmid pHG1 CDS324842 225 - 0.617778
NA PHG149 hypothetical proteinmegaplasmid pHG1 CDS145993 933 + 0.644159
NA PHG296 hypothetical proteinmegaplasmid pHG1 CDS313183 684 + 0.669591
NA PHG223 putative transposasemegaplasmid pHG1 CDS241141 489 - 0.646217
NA PHG067 hypothetical proteinmegaplasmid pHG1 CDS63441 663 + 0.710407
bfpG PHG352 putative BfpG-like proteinmegaplasmid pHG1 CDS366859 504 - 0.650794
catC PHG404 putative muconolactone isomerasemegaplasmid pHG1 CDS424548 279 - 0.616487
cbbPp PHG421 phosphoribulokinasemegaplasmid pHG1 CDS443946 879 - 0.626849
ccmH PHG221 cytochrome C-type biogenesis proteinmegaplasmid pHG1 CDS237587 1248 + 0.685897
hoxQ PHG008 HoxQmegaplasmid pHG1 CDS5751 849 + 0.584217
hoxT PHG010 HoxTmegaplasmid pHG1 CDS6845 540 + 0.583333
iucA PHG122 putative iron transport proteinmegaplasmid pHG1 CDS118150 1845 - 0.673713
kfrA1 PHG105 putative KfrA proteinmegaplasmid pHG1 CDS99042 1212 + 0.740099
kfrA2 PHG156 putative KfrA-like proteinmegaplasmid pHG1 CDS156234 549 + 0.748634
mmlI PHG385 putative 4-methylmuconolactone methylisomerasemegaplasmid pHG1 CDS404829 342 - 0.611111
mmlJ PHG384 putative methylmuconolactone isomerasemegaplasmid pHG1 CDS404461 276 - 0.583333
nagM1 PHG403 putative NagM-like proteinmegaplasmid pHG1 CDS423506 1014 - 0.664694
nagM2 PHG400 putative NagM-like proteinmegaplasmid pHG1 CDS419510 954 - 0.637317
nagM3 PHG396 putative NagM-like proteinmegaplasmid pHG1 CDS414676 978 - 0.613497
nagM4 PHG392 putative NagM-like proteinmegaplasmid pHG1 CDS410959 1008 - 0.627976
nagM5 PHG402 putative NagM-like proteinmegaplasmid pHG1 CDS421891 1014 - 0.627219
nagM6 PHG382 putative NagM-like proteinmegaplasmid pHG1 CDS401394 444 - 0.632883
napE PHG209 periplasmic nitrate reductase accessory proteinmegaplasmid pHG1 CDS227601 168 + 0.619048
nosL PHG247 putative lipoproteinmegaplasmid pHG1 CDS261624 528 - 0.660985
phaP2 PHG202 Phasinmegaplasmid pHG1 CDS223902 567 + 0.569665
phaZ PHG178 putative PHB depolymerasemegaplasmid pHG1 CDS194535 738 - 0.594851
pilL PHG354 putative PilL-like proteinmegaplasmid pHG1 CDS367822 1218 - 0.654351
pilO PHG349 putative component of type II secretion apparatusmegaplasmid pHG1 CDS363257 1248 - 0.673878
pilS1 PHG346 putative prepilin type IV pilimegaplasmid pHG1 CDS359884 501 - 0.606786
pilS2 PHG345 putative prepilin type IV pilimegaplasmid pHG1 CDS359292 501 - 0.62475
pilV PHG343 putative adhesin precursormegaplasmid pHG1 CDS357521 1248 - 0.595353
pri PHG334 putative primasemegaplasmid pHG1 CDS347713 1083 - 0.599261
repB PHG373 putative replication proteinmegaplasmid pHG1 CDS388395 1368 - 0.535088
tniQ PHG409 putative TniQ-like transposition proteinmegaplasmid pHG1 CDS428969 507 + 0.597633
tnpA PHG158 putative transposition-related proteinmegaplasmid pHG1 CDS157424 321 + 0.641745
tnpA PHG145 putative transposasemegaplasmid pHG1 CDS139764 2940 + 0.613605
tnpA PHG411 truncated transposasemegaplasmid pHG1 CDS429848 1167 + 0.617823
tnpB PHG159 putative transposition-related proteinmegaplasmid pHG1 CDS157741 348 + 0.643678
tnpC PHG160 putative transposase proteinmegaplasmid pHG1 CDS158119 1554 + 0.608752
traG PHG366 putative channel-forming proteinmegaplasmid pHG1 CDS380415 1866 + 0.58896
trbC PHG360 putative prepilinmegaplasmid pHG1 CDS374197 348 + 0.626437
trbD PHG361 putative TrbD-like proteinmegaplasmid pHG1 CDS374563 315 + 0.631746
trbL PHG364 putative entry exclusion proteinmegaplasmid pHG1 CDS378206 957 + 0.595611
trbN PHG355 putative lytic transglycosylasemegaplasmid pHG1 CDS369087 798 - 0.646617