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2024-05-21 02:08:43

Gene list

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COG category: Unclassified
Genomic element: pCD1

Number of genes found: 35

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YPCD1.05c putative yopE chaperonepCD1 CDS3014 393 - 0.409669
YPCD1.06 putative outer membrane virulence proteinpCD1 CDS3600 660 + 0.510606
YPCD1.07 hypothetical protein YPCD1.07pCD1 CDS4261 297 + 0.373737
YPCD1.10c pCD1 CDS5149 249 - 0.429719
YPCD1.18c pCD1 CDS11260 144 - 0.527778
YPCD1.19c putative virulence determinant proteinpCD1 CDS11562 549 - 0.335155
YPCD1.20 putative cytotoxic effector proteinpCD1 CDS12610 969 + 0.431373
YPCD1.21 putative yopT chaperonepCD1 CDS13578 399 + 0.411028
YPCD1.22c hypothetical protein YPCD1.22cpCD1 CDS14020 390 - 0.276923
YPCD1.23 hypothetical protein YPCD1.23pCD1 CDS14681 420 + 0.388095
YPCD1.24c pCD1 CDS15628 219 - 0.461187
YPCD1.31c putative V antigen, antihost protein/regulatorpCD1 CDS21935 981 - 0.377166
YPCD1.33c hypothetical protein lcrRpCD1 CDS23246 441 - 0.487528
YPCD1.36c putative type III secretion proteinpCD1 CDS26125 369 - 0.495935
YPCD1.37c putative type III secretion proteinpCD1 CDS26490 372 - 0.526882
YPCD1.38c putative Yop secretion and targeting proteinpCD1 CDS26848 279 - 0.433692
YPCD1.39c putative membrane-bound Yop targeting proteinpCD1 CDS27107 882 - 0.461451
YPCD1.41 putative type III secretion proteinpCD1 CDS29502 465 + 0.458065
YPCD1.42 putative type III secretion proteinpCD1 CDS29966 1368 + 0.486842
YPCD1.48 putative Yop targeting lipoproteinpCD1 CDS35593 396 + 0.444444
YPCD1.50 hypothetical protein YPCD1.50pCD1 CDS37006 99 + 0.313131
YPCD1.54 putative type III secretion proteinpCD1 CDS40825 201 + 0.422886
YPCD1.55 putative type III secretion proteinpCD1 CDS41026 264 + 0.416667
YPCD1.56 putative type III secretion proteinpCD1 CDS41291 348 + 0.439655
YPCD1.60 putative type III secretion proteinpCD1 CDS43221 630 + 0.485714
YPCD1.67c putative protein-tyrosine phosphatase Yop effectorpCD1 CDS47122 1407 - 0.474058
YPCD1.70c pCD1 CDS49657 99 - 0.40404
YPCD1.71c putative targeted effector proteinpCD1 CDS50211 867 - 0.344867
YPCD1.73c hypothetical protein YPCD1.73cpCD1 CDS53679 450 - 0.451111
YPCD1.74c pCD1 CDS54368 117 - 0.470085
YPCD1.77c putative replication initiation proteinpCD1 CDS56291 867 - 0.542099
YPCD1.78c putative repA translation proteinpCD1 CDS57150 75 - 0.44
YPCD1.89 pCD1 CDS62474 381 + 0.509186
YPCD1.92 hypothetical protein YPCD1.92pCD1 CDS66503 330 + 0.281818
YPCD1.95c putative yopH targeting proteinpCD1 CDS68179 426 - 0.41784