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2024-05-18 20:31:18

Gene list

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COG category: Unclassified
Genomic element: megaplasmid

Number of genes found: 43

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SOA0001 replication protein RepAmegaplasmid CDS608 882 + 0.461451
SOA0003 type II restriction endonuclease, putativemegaplasmid CDS2887 1047 + 0.338109
SOA0005 hypothetical proteinmegaplasmid CDS5714 306 - 0.473856
SOA0007 hypothetical proteinmegaplasmid CDS7065 786 + 0.533079
SOA0008 hypothetical proteinmegaplasmid CDS7840 720 + 0.486111
SOA0009 hypothetical proteinmegaplasmid CDS8534 285 + 0.4
SOA0011 conserved hypothetical proteinmegaplasmid CDS9465 243 + 0.395062
SOA0014 hypothetical proteinmegaplasmid CDS12332 96 + 0.583333
SOA0015 hypothetical proteinmegaplasmid CDS12732 147 - 0.591837
SOA0030 hypothetical proteinmegaplasmid CDS22368 123 - 0.552846
SOA0033 hypothetical proteinmegaplasmid CDS25235 489 + 0.488753
SOA0034 hypothetical proteinmegaplasmid CDS25754 222 + 0.436937
SOA0039 conserved domain proteinmegaplasmid CDS29547 1122 + 0.438503
SOA0040 hypothetical proteinmegaplasmid CDS30832 252 + 0.384921
SOA0042 hypothetical proteinmegaplasmid CDS31539 489 + 0.333333
SOA0043 hypothetical proteinmegaplasmid CDS32113 147 - 0.469388
SOA0046 hypothetical proteinmegaplasmid CDS35135 102 - 0.372549
SOA0047 hypothetical proteinmegaplasmid CDS35430 360 - 0.294444
SOA0051 hypothetical proteinmegaplasmid CDS43722 369 + 0.368564
SOA0055 hypothetical proteinmegaplasmid CDS46217 318 + 0.358491
SOA0056 hypothetical proteinmegaplasmid CDS46611 183 + 0.349727
SOA0057 hypothetical proteinmegaplasmid CDS46822 228 + 0.399123
SOA0062 hypothetical proteinmegaplasmid CDS50424 360 + 0.405556
SOA0067 hypothetical proteinmegaplasmid CDS54504 879 - 0.414107
SOA0075 hypothetical proteinmegaplasmid CDS59527 354 - 0.305085
SOA0094 hypothetical proteinmegaplasmid CDS73136 108 - 0.361111
SOA0104 hypothetical proteinmegaplasmid CDS84252 126 - 0.412698
SOA0107 hypothetical proteinmegaplasmid CDS87063 339 + 0.306785
SOA0112 lipoprotein, putativemegaplasmid CDS94602 4233 + 0.498937
SOA0115 lipoprotein, putativemegaplasmid CDS100525 4233 + 0.498937
SOA0117 hypothetical proteinmegaplasmid CDS105296 243 + 0.432099
SOA0120 ISSod12, transposasemegaplasmid CDS107889 924 - 0.469697
SOA0121 hypothetical proteinmegaplasmid CDS108788 126 + 0.420635
SOA0127 hypothetical proteinmegaplasmid CDS112911 129 - 0.565891
SOA0131 hypothetical proteinmegaplasmid CDS116108 426 - 0.286385
SOA0139 hypothetical proteinmegaplasmid CDS125695 492 + 0.430894
SOA0140 hypothetical proteinmegaplasmid CDS126416 2331 + 0.434148
SOA0147 hypothetical proteinmegaplasmid CDS135339 138 + 0.376812
SOA0148 hypothetical proteinmegaplasmid CDS135887 111 - 0.378378
SOA0155 conserved domain proteinmegaplasmid CDS145198 261 - 0.501916
SOA0156 hypothetical proteinmegaplasmid CDS145735 474 - 0.474684
SOA0157 hypothetical proteinmegaplasmid CDS146282 456 - 0.432018
SOA0171 hypothetical proteinmegaplasmid CDS159920 258 + 0.306202