TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-21 02:42:29

Gene list

Applied filters:

COG category: Unclassified
Genomic element: large plasmid

Number of genes found: 53

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_A0045 hypothetical proteinlarge plasmid CDS37268 354 - 0.449153
NA PSPPH_A0039 hypothetical proteinlarge plasmid CDS32669 216 + 0.537037
NA PSPPH_A0129 Yersinia/Haemophilus virulence surface antigen familylarge plasmid CDS110671 972 + 0.531893
NA PSPPH_A0023 conserved hypothetical protein, truncatedlarge plasmid CDS19153 150 - 0.6
NA PSPPH_A0018 hypothetical proteinlarge plasmid CDS16817 135 - 0.481481
NA PSPPH_A0133 shikimate kinaselarge plasmid CDS114025 6456 - 0.626084
NA PSPPH_A0065 invasin protein AfaDlarge plasmid CDS55181 450 + 0.511111
NA PSPPH_A0004 conserved hypothetical proteinlarge plasmid CDS2807 189 + 0.571429
NA PSPPH_A0083 IS801, transposaselarge plasmid CDS71644 1233 + 0.604217
NA PSPPH_A0037 trbC protein, truncatedlarge plasmid CDS30683 294 + 0.632653
NA PSPPH_A0066 hypothetical proteinlarge plasmid CDS55678 588 + 0.460884
NA PSPPH_A0123 hypothetical proteinlarge plasmid CDS105578 156 - 0.525641
NA PSPPH_A0043 hypothetical proteinlarge plasmid CDS36473 111 + 0.477477
NA PSPPH_A0149 hypothetical proteinlarge plasmid CDS131805 108 - 0.444444
NA PSPPH_A0011 hypothetical proteinlarge plasmid CDS9297 102 - 0.578431
NA PSPPH_A0074 hypothetical proteinlarge plasmid CDS62157 183 - 0.453552
NA PSPPH_A0022 conserved hypothetical proteinlarge plasmid CDS18767 414 + 0.574879
NA PSPPH_A0025 hypothetical proteinlarge plasmid CDS20056 291 - 0.522337
NA PSPPH_A0109 sulfotransferase, putativelarge plasmid CDS93845 837 - 0.525687
NA PSPPH_A0107 SanC, putativelarge plasmid CDS91909 657 - 0.531202
NA PSPPH_A0130 conserved hypothetical proteinlarge plasmid CDS111627 246 - 0.544715
NA PSPPH_A0017 hypothetical proteinlarge plasmid CDS16178 417 - 0.345324
NA PSPPH_A0002 Replication proteinlarge plasmid CDS385 1233 + 0.609895
NA PSPPH_A0049 plasmid partition protein ParB, truncatedlarge plasmid CDS40740 219 + 0.497717
NA PSPPH_A0070 conserved hypothetical proteinlarge plasmid CDS59577 189 + 0.571429
NA PSPPH_A0055 hypothetical proteinlarge plasmid CDS45495 186 + 0.478495
NA PSPPH_A0094 prevent-host-death family proteinlarge plasmid CDS82424 249 + 0.534137
NA PSPPH_A0001 hypothetical proteinlarge plasmid CDS134 174 + 0.568965
NA PSPPH_A0027 Levansucrase (Beta-D-fructofuranosyl transferase)(Sucrose 6-fructosyl transferase)large plasmid CDS20926 1296 - 0.559414
NA PSPPH_A0098 hypothetical proteinlarge plasmid CDS85657 123 - 0.536585
NA PSPPH_A0126 hypothetical proteinlarge plasmid CDS106991 120 - 0.491667
NA PSPPH_A0104 hypothetical proteinlarge plasmid CDS90704 222 - 0.563063
NA PSPPH_A0144 conjugal transfer proteinlarge plasmid CDS127586 372 + 0.567204
NA PSPPH_A0026 conserved hypothetical proteinlarge plasmid CDS20380 399 + 0.588972
NA PSPPH_A0111 hypothetical proteinlarge plasmid CDS95880 99 - 0.515152
NA PSPPH_A0059 conserved hypothetical proteinlarge plasmid CDS48891 228 - 0.565789
NA PSPPH_A0008 hypothetical proteinlarge plasmid CDS5387 183 - 0.453552
NA PSPPH_A0047 conserved hypothetical protein, fusionlarge plasmid CDS39068 825 - 0.500606
NA PSPPH_A0118 IS801, transposase, truncatedlarge plasmid CDS101101 111 - 0.621622
NA PSPPH_A0044 ISPsy16, transposase, truncatedlarge plasmid CDS36919 111 + 0.522523
NA PSPPH_A0139 stability/partitioning determinant, putativelarge plasmid CDS123560 324 + 0.490741
NA PSPPH_A0033 trbA protein, truncatedlarge plasmid CDS29010 351 + 0.615385
NA PSPPH_A0035 conserved hypothetical proteinlarge plasmid CDS29724 201 - 0.572139
avrB2 PSPPH_A0120 type III effector AvrB2large plasmid CDS102433 1059 - 0.475921
avrD1 PSPPH_A0113 syringolide biosynthetic protein AvrD1large plasmid CDS96851 936 - 0.407051
avrRps4 PSPPH_A0087 type III effector AvrRps4large plasmid CDS75990 666 - 0.525526
hopAB1 PSPPH_A0127 type III effector HopAB1large plasmid CDS107107 1620 - 0.540123
hopAU1 PSPPH_A0031 type III effector HopAU1large plasmid CDS26415 2196 + 0.567395
hopAV1 PSPPH_A0056 type III effector HopAV1large plasmid CDS45673 2394 + 0.599415
hopAW1 PSPPH_A0122 type III effector HopAW1large plasmid CDS104814 657 - 0.47032
hopQ1 PSPPH_A0012 type III effector HopQ1large plasmid CDS9395 1344 - 0.50744
hopW1-1 PSPPH_A0009 type III effector HopW1-1, truncatedlarge plasmid CDS6412 285 - 0.536842
hopW1-2 PSPPH_A0075 type III effector HopW1-2, truncatedlarge plasmid CDS63182 285 - 0.536842