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2024-05-21 06:36:16

Gene list

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COG category: Unclassified
Genomic element: pSS_046

Number of genes found: 69

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_P211 putative transposasepSS_046 CDS185165 168 + 0.482143
NA SSO_P078 hypothetical proteinpSS_046 CDS71581 294 + 0.561224
NA SSO_P240 conserved hypothetical proteinpSS_046 CDS210796 693 - 0.344877
NA SSO_P015 putative IS91 ORF2pSS_046 CDS12450 186 - 0.537634
NA SSO_P118 conserved hypothetical proteinpSS_046 CDS108668 234 + 0.316239
NA SSO_P047 hypothetical proteinpSS_046 CDS42373 273 + 0.498168
NA SSO_P126 conserved hypothetical proteinpSS_046 CDS115155 717 - 0.316597
NA SSO_P070 hypothetical proteinpSS_046 CDS66068 273 - 0.498168
NA SSO_P187 putative antirestriction proteinpSS_046 CDS164665 348 + 0.543103
NA SSO_P206 conserved hypothetical proteinpSS_046 CDS182317 192 + 0.520833
NA SSO_P020 putative transposase, fragmentpSS_046 CDS16042 159 + 0.339623
NA SSO_P148 conserved hypothetical proteinpSS_046 CDS133174 186 + 0.424731
NA SSO_P014 IS91 ORFpSS_046 CDS12094 357 - 0.521008
NA SSO_P214 IS91 ORFpSS_046 CDS188127 1074 - 0.549348
NA SSO_P238 putative IS91 ORF2pSS_046 CDS209503 366 - 0.530055
NA SSO_P185 hypothetical proteinpSS_046 CDS162929 429 + 0.599068
NA SSO_P005 conserved hypothetical proteinpSS_046 CDS3363 219 + 0.378995
NA SSO_P215 putative IS91 ORF2pSS_046 CDS189314 186 - 0.591398
NA SSO_P023 conserved hypothetical proteinpSS_046 CDS18113 225 - 0.515556
NA SSO_P048 IS1294 ORFpSS_046 CDS42626 1209 + 0.574028
NA SSO_P219 putative IS91 ORF2pSS_046 CDS190770 234 - 0.448718
NA SSO_P222 hypothetical proteinpSS_046 CDS192522 273 - 0.498168
NA SSO_P069 IS1294 ORFpSS_046 CDS65173 915 - 0.571585
NA SSO_P135 IS91 ORFpSS_046 CDS121226 357 - 0.52381
NA SSO_P199 conserved hypothetical proteinpSS_046 CDS177395 264 + 0.583333
NA SSO_P083 hypothetical proteinpSS_046 CDS76173 201 + 0.38806
NA SSO_P209 IS1294 ORFpSS_046 CDS183349 1200 - 0.575
NA SSO_P040 IS1294 ORFpSS_046 CDS35770 1200 + 0.575
NA SSO_P195 oriT nicking and unwinding protein, fragmentpSS_046 CDS175043 837 + 0.622461
NA SSO_P136 putative IS91 ORF2pSS_046 CDS121582 423 - 0.472813
NA SSO_P168 conserved hypothetical proteinpSS_046 CDS148309 270 + 0.503704
NA SSO_P057 conserved hypothetical proteinpSS_046 CDS52274 252 - 0.436508
NA SSO_P011 conserved hypothetical proteinpSS_046 CDS9390 579 - 0.312608
NA SSO_P062 IS1294 ORFpSS_046 CDS59338 906 + 0.571744
NA SSO_P220 IS1294 ORFpSS_046 CDS191333 1209 - 0.574855
NA SSO_P156 conserved hypothetical proteinpSS_046 CDS137720 639 - 0.370892
finO SSO_P197 FinOpSS_046 CDS176701 561 + 0.565062
hmo SSO_P201 putative regulatorpSS_046 CDS178354 210 + 0.366667
icsB SSO_P094 IcsBpSS_046 CDS87785 1485 - 0.340067
ipaA SSO_P087 IpaApSS_046 CDS80398 1902 - 0.353312
ipaC SSO_P089 IpaCpSS_046 CDS83357 1092 - 0.389194
ipaJ SSO_P084 IpaJpSS_046 CDS77287 780 + 0.378205
ipgA SSO_P093 IpgApSS_046 CDS87383 390 - 0.302564
ipgB1 SSO_P092 IpgB1pSS_046 CDS86741 627 - 0.334928
ipgB2 SSO_P024 IpgB2pSS_046 CDS18740 567 + 0.329806
ipgD SSO_P095 IpgDpSS_046 CDS89583 1617 + 0.354978
ipgE SSO_P096 IpgEpSS_046 CDS91209 363 + 0.349862
mkaD SSO_P009 mouse killing factorpSS_046 CDS7632 720 - 0.379167
mob9 SSO_P171 plasmid mobilization proteinpSS_046 CDS149488 180 - 0.472222
mxiH SSO_P099 MxiHpSS_046 CDS93161 252 + 0.34127
mxiI SSO_P100 MxiIpSS_046 CDS93425 294 + 0.35034
mxiK SSO_P102 MxiKpSS_046 CDS94446 528 + 0.339015
mxiL SSO_P104 MxiLpSS_046 CDS95603 408 + 0.303922
mxiM SSO_P105 MxiMpSS_046 CDS95994 429 + 0.296037
mxiN SSO_P103 MxiNpSS_046 CDS94915 696 + 0.318966
ospC1 SSO_P049 OspC1pSS_046 CDS44739 1413 + 0.319887
ospC2 SSO_P065 OspC2pSS_046 CDS61538 1455 - 0.323711
ospC3 SSO_P072 OspC3pSS_046 CDS67363 1455 + 0.310653
ospD2 SSO_P008 OspD2pSS_046 CDS5491 1710 - 0.331579
ospD3 SSO_P050 OspD3pSS_046 CDS46480 1698 + 0.35689
ospE2 SSO_P044 OspE2pSS_046 CDS40541 267 + 0.337079
ospE2 SSO_P213 truncated OspE2pSS_046 CDS187467 168 - 0.333333
repA SSO_P205 RepApSS_046 CDS180760 858 + 0.586247
repB SSO_P204 RepBpSS_046 CDS180209 261 + 0.417625
spa15 SSO_P110 Spa15pSS_046 CDS102043 402 + 0.330846
virA SSO_P142 VirApSS_046 CDS124335 1203 - 0.351621
wbgV SSO_P229 putative glycosyltransferasepSS_046 CDS200756 1245 + 0.298795
yacB SSO_P169 conserved hypothetical proteinpSS_046 CDS148652 150 + 0.52
yigA SSO_P198 conserved hypothetical proteinpSS_046 CDS177391 213 + 0.615023