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# Mycoplasma synoviae 53, 53

>MS53_0254 putative phase-variable hemagglutinin
MLHWDGFMPKIVIDDYVADGYDVANNSENNRAQHEAANRPLLEQWFKVNQ
DKLSLVADQLTKKLGEEKFKNMTLSNPTISWDEVEFSNKGSNKVYLTPKV
TFNLAAKDGYALAEGSTTTVTLTIRVLYKDSNLTRNVLSTQGAYYTATPS
DNATTIEKVNVYLNYTGPNIELNAELPKVGSQENTSLNGTSNVTDNFNNK
FNKLLIRYKAETSLFQKIINYVNKFDPKFPAKFVTNSINGVTITKVEKNK
KQKREELRPGNLEDLLYNNNVFLQQMHGDSSAVYFAVTALTNDKWLNTVL
VRIPLTKFIRSVAPFAAAAPTEEASGDQAQADPQATQMGTQAQS
>MS53_0176 hypothetical protein
MIIKNMHLESLLNSLILFNKMAKKNKIVFSVCGQSLNQLYFSKELQAPFE
IALSFENYNKLLFDKNFKTSDYKLNVNDNPLPRFFLDNNEFWINLLIPSE
TDLVLSSKTKKLIYKINQSSKHQKIISLVDYLNSNNPNTWAYLYFDSASQ
KLKVKAVYKINPNFYKVIKLNKNLSLPYLNYFEENLK
>MS53_0598 hypothetical protein
MKFFSETVKLEKNKWLEAQRDSLAALEEIKKKQPSLTINQSEILDFAFMN
LSLQMTDEHWKQKLDSNPNFVVYKPLLQNHKKTVDSLEVEYKTYYLDDLE
KFSFDDSYKSELKLESNYEELLQDYIEKFVQNYEFHLPKKDAPVAAGDYC
KVVFYEKEEQKASERPVFVYAGKSKDQLAFEILSLELNKPKAIDFYGLKG
YVEVLEAFEVKHMPITEENVKLLNLPFAQTLADLKNVVYKQVRENIVANC
LYYYGNDALNFYTLNNKDIAKIEFEKDLEAATSQMDQSKNPNFANYTLKK
FSVEVMLRQKWNIDVTEEELHAELQIVNSFINPPKNSSVNWPRLYHVVFC
KKLGLRLLKKNFPEVYNEHKEFVRIS
>MS53_0329 conserved hypothetical protein
MKQKIFISLSAIASIGLGLSAIACSGANQSGNSGSNNPVNGQGELQERRA
NSLLGANPEGRNNAFQQDKKEKIVLAANFLGSTAQANALVELANAYNSDP
DVKTKYAGFFKPVEVEQIGSTYSDGAKKVAQYLKAKNKSAFYNLVLNHPS
VAAEIAKSNMLLSFNDSLGRENLDTDVSLFSSLFTDANTNTENIKNPSTY
ILPVMKSTMVSSVNGPVLYYILKTMVDNGATLSQDKDTQDFYNALMKTSS
SDLEFIKQKWGNPVDNARTLVTSANLTISKDMFNKYEDLLNFAMVAQKLF
TNSANNQNDLHIVGMDFPTVTLKTSVFSIVGNDYSKSLEAPSKVAGTNKV
SYNSLSTTGSPAQVAARTVYKKLKDAAGSGAVVLQPLGQYSSGKQIYHNF
ALSIGSTAGYLYNFIDDTAASALRFTFDSSLDKFSFDDNDNPAASNYNNR
YFVSFKQGSEYLSASAKDKNKTNEVLLSFGKNNNALIASGGKTASGSDFH
MVDAKSDQALKTALAEVTKDGNQENYKLLILRQSSNDNNQLATMKAKVMN
LASKDTKKELVYAGVAKGGSSSRPRNAVLVFVKTSNNNFVKTDLEKYGKQ
LGASVSQLTSANSLNKSELVVMNAPGKWNKNSTKNVAFLRGPSLIGIKAN
EEDDNATKAFVHWLVTNKKTYTFFSGKNNEVSASPSEFFQRQMSYLMPIA
GFETSTTKFNNGFLDNALEVFSSAAKDPQNWTTYEPPGSELGDLFDQALD
SAFRNLGNQALVNTSADKLQSFEAFVNSFTEIFGSSN
>MS53_0412 hypothetical protein
MSIKNNSKTKLKIFIKRNFDEIFYLSALFLVSTILLITIVFNYSSIIFGY
LLSGLMIYLWNKYNKLFYYVFFQKVNFKYSKWVKIMIFLFLKKALVFITL
GALIYFIVTIDVNAVINSEISGNKVIKFMHPINIFAFIVGIIINMFIYFL
ALYLHAKKNSK
>MS53_0493 hypothetical protein
MNKNNERENNLNSASQETSQNFSNEFDNKTQLIDLEKIETVPLKSKKEIV
KLIIEKNQFTEEDKLAFKKQKRIYWMAITSISAIALLALFLLLSVWFQFF
>MS53_0585 hypothetical protein
MQFLNLKGLVKNYNGIVCIETNNSDLFIRKLFEFEHAENQSSININNNKY
SIKDFIIIDNLTKYHDLYNFNSKGLLNQWINDLDFENQKIANEKLVLEIK
NLLNNKIGFEFVSIEENNSKYLKYLFNLENDKFIDNKSLIKWMENQKYNN
QKINLIIKNFDFVLINELIKFSNNFNIIVLTNDFFKHINNFDYIESVAFT
NEDLNRIVSIEEKDSFEYFLEEIFQDSIRNIEKFDFFSQNNKDLIKKSLK
INFF
>MS53_0402 hypothetical protein
MKKFEFLLLGSATLPLMAVAAACGAQQEKVEEPDFVHETLTDAEKIAFQS
AAGSNLRTMGRMRLVVRAALVNNDKTLVSRFTTLAGEDATKKAAVETFKT
EWTGKWGALFGTLSDGDKNVFSGENKYANGTATLAEYQTLKTAFTEKAKD
LLASVAKVIKALGLGDLSDDYKTYLDSANVSALQTRFNYTGALVPDSSTL
NDFERFLESIVGEDTSKDQSNPTPTGNMVTVLSGLEDNAVFSKTVMSLVA
LLTDRMVRLVEGAEAAKVLVSTGTATAEAAKETYLALRKYDKWPASTLKT
RGTALSTPVQALEPVLKNVETVLSPLFAEGGKGKSLVDTLKAKESKTDKE
TMLLSRLESLANLAKANSELEKLSLLVYKDGVALDYEAAVLKSVKTYADF
YAKVGLSWQWALNVLLWANPAKDLVTYFTASGLADKFADKKADLEAVVAE
VTKLNVAATLANFDKFKAAGDTLNLGLFNQKARALTSHLQAMLAATKK
>MS53_0118 hypothetical protein
MVMNFEQKNNLNSLHVDVDKDYKFLISSKKTQGQFYGLVFMFFSLAFSVF
VALTISIYHSVFNAIVNGVDNAFTRFMKEKPFVVYGLVLGLFVAYFIVIW
FLRKFSWKSLIFSYPVVVLFFSVMISMALVVYSINPDWNRETTSYKNPPI
TVPLVLMFAPMLVLFFLGVFSYYGLFDLTKLMRVSGFLLAVFLILTVIGI
FAVGPVYGTINVAISIIGIAIISISTIYTFNRILTDSKNLAFFSKHEFIA
RAAGYGIELFISYANILWFLIRIMMKFKK
>MS53_0438 conserved hypothetical protein
MQKNNLIDSWKRLYTQHYLDVEFFKEQSALEKNLSLPKINFYSLEFNSDA
ENNLSNLNLFTLLGILKSFCELKNVKNKHIFMHFDENISPFLVRKAISLI
NYNVENIYLFNSENNAYKLDLANDFVVYQVSKAFNLDYVIFLQKNKVNNK
YYLKIYKKNFLLSTLEYEEILEHFKNSNHDFVFKENIDNNKKIDINKIIE
SAILPSEINLLKKSQWTNDSLIVSMLVASNLDEKILTQALEKANYKVIKY
TWNLHKKLSKWKKYSLQKFLNNSLNKSDVLVILDANHKLKLVIRTKKGFR
LLSDDEIIFIYVSYFYLSLKKLNLLNQNFIYIPYNAGPIVHKILTNYKIN
YKYIDQANFTNVLLAYENGFYSSGQSFNNLQSNYAFLINFCSILNAYKDS
NNLINLKYKTVKKFASLFWQTTKKTKFSEDGVETLIKNTKQFEKVGKYLK
LEKIETINYLSKNYHYLFDIYYQYKYKKTTHKIKINLTYNLISKKLEIKM
TSEKNDNFWIKIKEFFINKYMLMIFNFLIKKYKNNIKKTETYYEISKS
>MS53_0174 putative P60-like lipoprotein
MKNKFKKLLTLSAIMPVSAIAISCGTTFDDPEKVAQDKLLNSNNAKLAAE
KFWLDQSIASLYGSTSAELTSNEKYKQEALNAYKVYVASQNLKDPFYLWN
QVNSWNLKGLFNESAELNSLKKYKSSVDETSYWLAYNKDETDVKFNTQKL
LLVLKYFELNDAKSLQKVNQNYALQKDNYDNNQFNLIDYVLNKKLVQSWS
YDNQSDKNDVFSTLTRSIQNVSDYNNLLKNTPALLNVASQELLFNANNSA
AEVTMGGFANLKALPAEVKLSYDLQSLLQVTEAKKLSGFYNYQNNTLVPL
SNTSLEAPVFVSRDGQLLKVSYFNQVAPIKDTIDGKDVLSFNKTAYASKL
FNLEVNLAAYDDKLYNTAKSAFVALGYLLEVNNETLKEKLAGEDFVAK
>MS53_0211 putative phase-variable hemagglutinin
MKPKTCPKMLIKFWDGFMPKIVIDDYVADGYDVANNAENNRAQHEAANRP
LLEQWFKVNQDKLSLVAEQLTKKLGEEKFKNMTLSNPTISWDEVEFSNKV
SNKGYLTPKVTFNLTPKEDYKKASDSSEKVTLTIRNLYKEANSDTNVFAT
QGAYYTATPSDNATTIKKVNVYLNYTGPSIVLDADLPRVGEQENTSLNGT
SNVTDDFNNKFNKLLIRYKAETSLFQTIINYVNKFDPKFPAKFVTNSING
VTITKVEKTKELRPGTLDDLLKNKNNVFLQQIKGDKEAVYFAVTAIASNN
WLNTVLVRIPLTKFVKPLSVFTAPVVTPPAEEATGGSQTQEARLQPAGYS
NSDSFGSTEQTPPSTT
>MS53_0416 conserved hypothetical protein
MTNHFPFFQWKKYRKISLFSGILILLIALFVTLSNWVLDVRGLNNSLSKL
SASARQEIIYADAAPSVLATLWKNTLTFTHMSNYALGIIWILFALYPTKW
HSQRAAYLITVYITITFLVYWGLIFPQIFKGGIGPFKTFLTTLVHAINPI
IGFSLITYNRKRITISKGTFFGLIPIMVIYYGFALVSFLIGQNTADNFAG
LKKSPDSDVLINHQNGQKLVDNVIYEFLNILHPFFYQGDNLAIVVAINFG
LVVGGILFTLLLGFIWKVSLRLKWDRENKAHLVY
>MS53_0386 putative lipoprotein
MKKLKFLFLSGSVILSAAPLAVSCGADEVKPADKQIIFATAQGDTWPLMV
ALKPMIEYYNRTFFEDPDFVPVYLHTQTQTQTYSELRLITDTITNIDANS
ENIPNIILSNQTGAYLMKSRGKLLDLKENGLNIRFSQKIQDSHSILAGQS
LDTKQLFNVPFDIADTDSVVFNLDIMNKLFELIKSNGGKVDDFDLVQKAK
AASETGSDIPKRSPFYALKAKSSSAFDGYHVTEDTFKTFKGIRDFAKKVY
DATDFDQEKTGELKLSANVLSIDYQEDVFRKELQSLTKDSQRLWNLETTS
DANQPTKINFENLKNSESEASKTFVKLWNEWKAALAERKVKEGGTNDIRF
QSIQFKKNENADWGSYDIRKYSSAISYAASVGSNATQQSYLSVAQFLSGV
QEPEETEEYKSWASHDDVFMKSQLLLAKENANKAYWEGGSSIVAIQSSDE
DLNKGTSKFLNWLYTGTVIGRKTFEEDEEVPNWMKIAELSGYILPSESAV
TQENLDKMIASRDQLISDWRKQLKAFKERIASGESFISGKRESIKLSIDE
KLVKANRLNSAIVTLESLLKYTNNDDVKEANNVGDYNTAVLVDILKDDLL
NLNTPTKESNVFESSTTGEEQLAKFQRLVRKL
>MS53_0226 putative phase-variable hemagglutinin
MPKIVVNDYKIVADGYVANTDEVKKEADKTTNQEKLQNWFNDPANWEKLA
EQLTKKLGKEKFKNMTLSNPRITWDEVEFSNKLYLTPKVTFNLAAKNGYA
LAEEQDASAKEISLVVRVLYNRDDESTIQLPTQGAYYTAAPSDANADNPA
SAIKNVNVYLNYTGPAIMLNADLPKVGNQANTTINGTSSVDSDFNTQFRT
LVFNNNNNVTSLMNAVVNYVNRFDPKYRAMFVTNATDGVTWAKVQIQKVK
GQKDREELRPGNLEDLLYNNKVFLQQVQDDSNAVYFAVNGVTSKGWLNTF
LIRIPLTKFVRPISVLEAPQQEETQEDGEEMQQGNEDGTQAGQTDETAGS
GTPQASTPQTMPNSSQ
>MS53_0457 hypothetical protein
MLSKIAPKISEIPKKNMKYFRNFFIPLSLETLNNSKSLEPTNAPENELES
GDINSETIITQTPIKTKNITRVNIRLILLFF
>MS53_0236 putative phase-variable hemagglutinin
MSNAFFYLKVNQKLTWKYKKAPAQAAPATQSDSIAAESTSATVRVAMSEE
AAAEAKTQTPAPTPAADLASTVSYLKSLNDTLKAATDALNGDNPTTKTAY
YKADAGRTLYWDGFMPKIVVSLLTTKLANQEYDASVRQGGVVFWKTRNGE
ILDVWFAANQDKFTLVANQLTRKLGKDKFKNMVLSNPRITWDELTIPEGT
ILTPKVTFNLTPKEGYEKATGSLETVTLTIRNLYKAAAPNTNLFATQGAS
SPAAPRGATVNDANVKAKVNVYLNYTGPNIELDAEAPTVGSQDNTSINGT
SNVDDAFNTAFRGNPSRGLLFTNRYANPLLKSVINYVNKFDPKYRAEFVT
NSKNGVTITKVESDTQLRPGTLDDLNKNNVFLQQIQGDTEAVYLPVTALT
SDKWLNTVLVRIPLTKFVRPISVLEEQSVQD
>MS53_0175 putative membrane protein P80
MHENKKIKKVSNSQATRKKAAIATLSLLSVGVILAIAVPLGVTTNSVTVI
SPVDDSSTAFTFKGPNSSDGSQKLTVGSVTKSVQGSEAQVKEEISDVTKK
LVFYLYDQEYKASVEQQRVYNASLALGQSARNDIALSSLEEIKQKQTKVV
EDLKRNYISVYGFQNWQKQFTETLSTDPKYSGAKDEAEAIENLTYNEIKT
YAEARFKPEFVNTTRSEINKLASRDIYKVDANGNEISSNGQRQVLIKSGE
RVNSFYQDGSNYFLNAANNNLATAFLTKSFVSSQKDPSEILKSYFDANDL
HVVTSVDLPGKLSSPVTNAITLDADAKAKFINLAKYWSVKNTNSQRQILS
GSEILKQLKSATSYFPTPTEALSQSQITVNQGNYQTFLNTLTLTKGDSYG
TSGLQSIESVFQNGTEQGLSSIWSKVLGSTLNASNLPQVDLSKVFDFENI
RTNDPSAYSRFSTLLTAAKNATSDQDAFNKTKELNQFIESYLTNMSNAEF
SSLLVRQYTNQLVKNVGGNNLVSFIYAIKDMPNAYLVVSKDKISIQQYTN
FTSFDNFKEFVKNTLYSVAQGNKNIFNLPQAVSQSQNDNVILAHMLNDAD
FVSYLKTKENPFSKDKSNYSDEDIAKIKQENASIIAGNKSKMQIQNFTSV
SNLINNSLVSQNSYNFGVKDGVARIISGFNGSTPTYLGNSESAQDLIVKV
LISK
>MS53_0213 putative phase-variable hemagglutinin
MLQAIINYVNKFDPKYRAEFVTDSKNGVTITKVQKDKQKRDRELRL
>MS53_0247 putative phase-variable hemagglutinin
METSRSVTAAKAVKDDAQYNSVDATLKTTLEEKYTAATALLEDGTKLKNL
DASSNLDTTKATLESAKTALDAAVAAVKPELEFQKTKTSAAAKVTELESL
VNTALKTELQRQVNALTKDHATEATTMLANLTSLKDSLTSLQDLVSKGLA
MQVNYPRNYYDADNKSAFDNALLKASSVFPAFVWTTNSIMVETPEGQLPN
PRAWTKAREKSEFKLQNFVMAPAQAAAPTTAQTSPSAAASAIVRLAMSEE
AAAEAETQTPAADLASTASYLKSLSDSLKTETDKLNGDTTENKTAYYKAD
ADRTLYWDGFMPKIVLEGFDSSWAQNSENERKIREWFREASNWAGLSDQL
TKKLGAERFKNVVLLNPQIIFEDVRLLTRGSVKFPKVTFRVAAKDGYQLA
NGEGKTTTLELKIRVLYSSSNPNALLLPYQGASSSAAPREATVNDANVKS
KVNVYLNYTGPNIELDADLPTVGGQKILQLMEHQM
>MS53_0037 hypothetical protein
MTIKNSKMFYRIFFRKFSFPIIYCLIVSIFYFSFILVSFFAIYNNWSTDN
HPGKVDWIIKNQPGTTEGIPTSEQQKVFYSLAFYQQGYFLYFVLIFIYII
PVSMFSHYLKIFYKSDYYKRIILLNGNKKTFRYIGLYLVIFWFLIFLIIN
LLRILGMDYIFKFNIWLQDAKKIRSGIEPYVGIRLDPNEIFHYYSYQIPQ
SHFTENFNNRFLTYIIGCISIFIASILFTLFLTFTSVWIKILFLAMLFVS
YVLGIYYGADFNFYLEKDITVEYAKSVNFLWPISLLNPYVTLPLILKFYI
SSKEFDIWIYFPLIMQFLFFSILLATTLVIRKRLDRHIFL
>MS53_0064 hypothetical protein
MNNTNFKVNIVGDLSQKDFKFQLELSRVWTNNLFSISIFNTLDKNKYALD
LALNSKDVLKDVQRDLNQIEMPFNLIQLSYNKLNNIFVTIYNKNYPNERI
QYQILLSTFKKVKLNLKSNKENIDYKIPYQYLFNFNSNKTWYLDKTFTNI
KWKFHNPSKQRSLGEIAQILFENDDAFYFETRRNKLITELPVVNSASLLA
KPLFDTQFELAIESNLNNLGFIQDANDIKFKKLFLNFDDYISIDNLNQRV
EINGDIAPTKKFTVPRFFIGTLRYSLIFENSNFEIITEKILKFEQDEFID
YSRPKIKIKDITDDVNFSLLRLKYKINLSKIINFISLEDDQLNFNYLLRN
NLIYKKDENE
>MS53_0075 conserved hypothetical protein
MDFSNIEINLTKTNLENKEVNFSGNQLRSYLKNLLDKILVQSYLNLKIVI
PDLYDFLWNHSIEEKANINLALIIIKYKTFDWFFNACKKNNIDVYFTIDY
KKKEKVLKNIQNFLKIKSSDLYKKSKYMLMDFFLTKEVEINSLFIHDDLY
NLFREIILFYNHWNPKGFFIENSTALFDDNKFKKIVNYQSYEKIDIINKL
LKNIKKEFKCEIYGIESSIIKIKNFYKVSAFDHHFYRGQHLTFRKLIKNF
VDCKKNSVSLIYDAKNILSSKQVKIFKYLNQINTISKLAIMNFDYFSFVY
LYPKNENEFIQTFSHKLLYNHTNNLLFSYSNNGFFRSKLKNKNALKIKAL
YVNILGVKYFKIYLNFENEKYLLFCNLSEKIIKINTSKFKNLFVDDSQKD
NLLLAFESDFFETN
>MS53_0042 hypothetical protein
MLSTMIVAPSAIIASTVNKKEANAFFGKKTEIIWIQKGEKHVDGNDYKTS
HDGRVWARDYFWSSDEVFWRGVAEARVERVLFDSTLPNRVVLGVETWVEG
SGRPSVSSSISISQSSGLEASLGISSNPTEKGRSFSYVFEDTNTSSVHYS
YSGRIWSWSYVGISTNPFLKKRIK
>MS53_0454 hypothetical protein
MLFFCSSFSFFFFFFRSYFFCYASFNWSCFFFYLSSFCRSFSCYFFCCCR
SHFSLWFFFCFYFSFSSWCSFFNSRFYSFFSFNFFNFYFFSSYCFSSSCF
CWFSFSCRFNFFFNYCFFCCFYFCASSWFFNCYFFSLGFANFCFWCCNFF
FYFNCRSFFNCFCFSYRSSFFTRRFFYFFTCNFFNRRSFFNFYFFRSNFS
CFCFWNSL
>MS53_0450 hypothetical protein
MSNVNIKNNNYDKNYLIENERFLSRQISKIVSLDFDRSENIAFNDIANSF
SKKNSGIKHIVNFCDNIYNLNLDYLLILTPSDLKISILACLDFVLGKQDF
NEDKKIKFIFIDESESSSSIDEKIDYFFEKVRDNRVGLLFIDEIVKNEKL
KKVGQNLIIKFNKFSSHFIVKKYLFYVGKRSLFSQNYENLNLLKENILFS
SEDIHNDYNIFSENVLIFLALKGINISKLIDGYEIEVNKIFFKTSEMPKS
LDLAVSLYEARNELFVEEDTQKIFFVAYDDFLINISKLFSIKYQKLLSKY
RAFCDYLHFPRQIYSVGQIVLNGAKNIFMIYLTINNKIFDFQFSSNLNDN
YGQDFENYTLNEMKRHSKDVFDNNFLSLNPNSKSIEINLENNKEQTLGEL
LAILYWSKIFYSMISSQKAF
>MS53_0476 hypothetical protein
MITMIIIYNINMSNYILYKRKNPKQIYIALGISKGYGKGIGNLVGLGYWE
EIKEKYSLQNIDDLKQIARLVPVGENKIEVKTNFFNYLTRHLLKQI
>MS53_0220 putative phase-variable hemagglutinin
MGADKFKNVVLTAPTVSYEKVTVGKYTWKNPKVTFNIQAKPGYQLTEPTT
NSKQISLTIRVLYENQASTQNLLTIQGASSSAAPSGSSVDDANVKANVNV
YLNYTGPSIVLDADLPTVGGQENTSINGTSNVTGEFNTAFRGNPSKGLLF
TNRYANPLLKSVINYVNKFDPKYRAKFVTNSINGVTITKVEKTKELRPGT
LDDLNGNNVFLQQIQGDTEAVYFAVTAIASNNWLNTVLVRIPLTKFVRPL
TEFQAQSATTPTQEGQTTQGQENSAGSGALGSTTGTQTPSGGSSQASGS
>MS53_0390 hypothetical protein
MFLFAIFLFFISFVRIDFYKPALINFDNDEIYISNFSSEKLQPNQYIKFS
YLSNEEVFQFETKIEKILDSKIYIKDARIASELKSKNINLLNISMFFEEK
VLWKYILKI
>MS53_0265 putative phase-variable hemagglutinin
MFQAVINYVNKFDPKFRVQFVTNSINGVTITKVQNTKELRPGTLDDLDKD
NVFLQQIKGDKEAVYFAVTAIASNNWLNTFLIRIPLTKFVKPLSVFTAPV
VTPPAEEATEGSQTQVSTPQTMPNSSQ
>MS53_0246 putative phase-variable hemagglutinin
MNGTSNVDGTFNTKFKDLVTSDQRTASLFFQAIQKYVNTFDPKYPAKPIS
DQKNGVTWARVVGNALKIGELSETNTVFVQQMQNDTKAVYFAVSAIASNG
WLNTFLIRIPLTKFVRPLTEFQAQSATAPTQEGQTTQGQENSAGSGALGS
TTGTQTPSGGSSQASGS
>MS53_0552 hypothetical protein
MEAEVFVRRLVLLELHLKETILSFISPYGERLVLISPTTGEIDWTISGML
VSIPNAIGPSPGSISDNWLLSNFCNWFILIITSHNIK
>MS53_0234 putative phase-variable hemagglutinin
MALYWDGFMPKIVVDDGYVENTEENNKENNKNTNQQKLEAWFKANQDKFT
LVADQLTRKLGEEKFKNMTLSNPTISWDEVKFSKGNVTKLYLTPKVTFNL
AAKEGYEKASDSSETVTLTIRNLYKEANPDTNVFATQGASSSAAPRGATV
NDANVKAKVNVYLNYTEI
>MS53_0260 putative phase-variable hemagglutinin
MNYTGPNIVLDADLPTVSGKENTSINGTSNVEGTFNDKFKELLVDNNRVP
REFLSTVINYVNKFDPKFRAQLVTDTNGVAITSVQSKKELRIGNLNDLLY
NKKVFLQQVHGDSSAVYFAVNGVTSEGWLNTFLIRIPLTKFVRPLTAFTA
TPASAPTQTDSGTGAQTQPEAQS
>MS53_0210 putative phase-variable hemagglutinin
MSDQLTKKLGAERFKNVKLTYKEVTFSTNAVKTPTVNFTVAAQDGYTLDN
STNEISLVVRVLYNRDNESTIQMPKQGASPSAAPSNSSVNDAKVKAKVNV
YLNYTRPNIELDAEAPTVGSQDNTSLNGTSNVTDEDFNAAFRGLLFTDRY
VNPLMQSVINYVNKFDPKYKAAFVTEKNGVALTSVQSGTQLRIGSLNDFL
YNNKGFLQQVNTDTKAVYFAVNGVTSQGWLNTFLIRIPLTKFVKPLSVLQ
AATDSSQNAEQTGETQGSQPEAQSQ
>MS53_0059 hypothetical protein
MAISYKQATSKDLNLSFDFEITYFEMSKFVIDIKNTLRPLEFNEKYCEWF
IEDLIYFLKSNGYNFRFDLGLLELVNGKNLKKLVNKKPVDLNDLEFEEIK
YFLEKKITNFDVRITK
>MS53_0233 putative phase-variable hemagglutinin
MWFTSGSVTKAKEAKDDAEYSKVTDTIKTTLEEKYTAVAGFLTEGSKLAN
LNADGTLATTQSDLESAKSALDAAVAAVKPDLDFQKTKTIAAAKVTELDA
LVNTALKDELQRQVNELTKEQADQATTMLANLTSLKESLESLQDLVSKGL
AMQVDYPQKYYDADNKADFDAALLKASSVFPAFQWTAESIMVPALEEDAL
PNPRAWTKAREKSEFKLQNFVMAPAQAAPATQSDSIAAESTSATVRLATG
TEEAAEDSESSEAQTAPTADLASTVSYLKTLDTDLKAQTAALNGDTTTNK
TAYYKPINGRTLYWDGFMPKIVTTALPTTVAPMNREYNESPTGGHEFWKG
RNKQVLDAWFAANQDKLSLVAEQLTKKLGKDKFKNMVLSTLTITWDEVQF
SNRLYLTPKVTFTLTPKEGYEKATGSLETVTLTIRNLYKEANPDTNVFAT
QGASPSAAPGNPTEPNNAIVIKNVNVYLNYTYI
>MS53_0238 putative phase-variable hemagglutinin
MPKIVVDGYVADGAGANKAQHETKNTRLLQQWFDTPANWEKLSEHLTKKL
GANKFKNVTLTNPQVSYEEITVNSNTWKKPKVTFNIQAKPGYQLTEPTTD
SKQISLTIKVLYENQAYTQNLLTIQGAYPFAAPSNSSVNDANVKAKVNVY
LNYTEI
>MS53_0314 hypothetical protein
MTKLPKEKILEALTSFIGYKNKGISIYQLELLKLIKNKKVIANKLSIERD
FIFRWWYFLNIDLDIVSKKFENNKITENTRKLAKSIASIDVSKYSLKEEL
NYILDNYILVNSYDNVSEIKNIFHLIIHSI
>MS53_0609 hypothetical protein
MMKKIKFSFKDLNTNYFFLKCLMLVSAHFLYLADWIWNGVGIEHFTTICT
YFFGLILTHLFLFVFYRNKKNEELKFDKFWNSKQKKSTLLFLVFFVFVFL
IFSRLNLIWSDPDTFPYSNSFHRTLYNFWAIFWDGILVFNSFIVIASVLF
LTLLSDYVFKLIYYTKPKYNAVEKSKAKLKNFAVIYLGVVTSLWIQIAML
LKHIYYKETATLAQIVNPVFLLILLVGFALFVFVYFNVNLNNLKITKDEK
SQIFKFSKNLYYWFLWIVLAWFFISWIPYTYYFLVTNYQVIRGFKERNSI
DINPSSWNFVHMSYLAFNSMLIIMPSSLLLTCAFSFLSRKHWSYKLK
>MS53_0285 conserved hypothetical protein
MSISASCGSSNGSINESNNNIGGVTDNSSIKDRRLNALLGANPEASSNAF
QQVEKDKIVLAMTFSQGGAQAKALNELVNAYNNDAELKAKLGNIFKEVTV
NNVGSGYGEGAKKVSQYLEAKNTDNFFNLILNYSPVGAILANSNMLLSFN
DPNGNPDLDTDISLFNKDFVNSNATTENIKNPSTYILPIMKSTLVSTINA
PVMSYILDTMKAKGVTFSDDVDTKNFVAEIDSKGQPDRSQIQKQWGDPVD
NATELLKGFQFSKKIFNNYEDLIKFAELAQKLFKNTQDNQNDLHVLGIDS
PTSTFQNSVYSLTGYRYANSLEATSKKNGVNTVNYNSLTTTGSPANVAAK
TVYETFRSAVATQGVVLQGPGQFTSNKQIYHKFAMSIGSTAGYTHNYIES
VEGTINFNFSQYSGFNFKASTNKSDRNNYNRSGFLTFGLGLNGLGRKYRT
NYTSDQIFLGFGSFKNGLAKSNVTLKSRFDIKSIDTTNDASIQAAIDKIK
NDTSNWKLLLLQQSDSSKTQEFTDFQTVVKNAASQNSSEIIYGGVAESSN
SKNPQKSLVVFVKSSNSNPVKADWEKYIKLLGGTAEEQTSSNTLNKNELV
VINAPTKWNENSAKNSIYLQGPSLIGIKANEVDDAATRAFVHWLVTSKKE
YTFFKDDSKSTVTATPSLFFQKQMSYVMPTSDFQNSVSDKTFDSGKNSRT
DNPFLENALQVFKNAAKDQANWTTYESPGSEKGDAFRNSVESAFKNLINQ
AANGTQVSQLQTFDQFVQSFRDTFGSNNN
>MS53_0435 conserved hypothetical protein
MKKSWQDAKANIKRNNFLLLAVAFLLGAVTNAMISSFANDVVLSYIANAF
GIKNLQEWKLENGILIGKFLGTVIQFAIVMVLLFFVLFLFFVIKNNYVEH
KNRKNPPQPVVKPLTVDELILKELQQLNSNITKNQLSQDMQTSLSALETS
ARKTSSRSASSKKLNKK
>MS53_0215 putative phase-variable hemagglutinin
MHKIVVSLLTTKPANQEYDANPRTTSVTFWKQRNGEILDVWFAANQDKFT
LVADQLTRKLGEEKFKNMTLSNPTITWDEVKFSKGNVTKLYLTPKVTFNL
AAKEGYGKATGSLETVTLNY
>MS53_0227 putative phase-variable hemagglutinin
MKKVTVNSNAWKNPKVTFNIQAKPGYQLTEPTTDPKQISLTIRVLYENQA
STQNLLTIQGAYPTAASSDANADNPASAIKNVNVYLNYTGPAIVLNADLP
TVGNTDNTTINGTSPIRDAYLATKVKALLNKTANQNYSTELMQAIIKYVQ
TFDPKFKTSVDPNASQSTYRAWVSWMETRERDMQRNPALVQVELKNPTNV
FLKQIQKKIKVKNQNKNKVNHKLKNNNKIKVSFKI
>MS53_0008 conserved hypothetical protein
MIYLIMSIKRIAYFGMYLGIILGLSLIPYIGLITIGPVSINIITIVIIIA
SFHLGFFGGLASGAFVGLGSFLAALLYGRILFIYFDIAFLPRLLVGALIG
VIVIKIKKITIWKALFLGLLAALANTVLVTAFLFLHNAISTIAFIGESLK
GFVFWVSLISVNALVELLVLGALSMFLFKFYIYLCNKTNQEKAEKLLKY
>MS53_0367 conserved hypothetical protein
MDLILETLQKRLNSDKRKLKFYEFLDRFIGLFITFINIVILIIASLALDK
LTSDSEFNKNNLFSQNTSLLLLIAFTIVLIVSFFLNIVIEIYKINQRYDE
YKKVSNTFSYLIVKYRTKFINEKDLIAQTNKLWEKASKKTKIQIKRYLIN
MVKGTN
>MS53_0374 conserved hypothetical protein
MKVRSKLKKILMVTAFLSVSILASSCNIFDTLSSRQKKDEKKDDKLYLNK
NGDPEDQDDQSKKPVVTPPVTFKPENPSKDPISEKPQEPDAPEAPSAENN
FNINTDIKNWDQKLSNVQLQSIYNNNPQLTRFNFTKAPENTKFSSNEEYL
ESIFKRTFSINFNYSTQTIAGTAWVLDYHYDKNNPKEITLYLATNFHVAT
NLRTANDYEFYVQNSPNLERVRSVDLRFAQDWRNPDTSYITKRYTGRNMP
RNIFLAKNFMDQEVSSSYNDGGGYYADFSVIEWKFKISDFYSNSSFFINT
VDPSLDLWVKKIESAAGEVKAAVDKNLGIDGGYLNTKAHEGYTSLDYTTI
QSTYYSDLSKTITNEVRYPQTVNEILEFQKNVNNTFTNYIYAFRPEYWFF
GGYPLIPNDGFVPTFNIDYDNLTNLGFNKNDYNPDFKIIYTLNNTKNTDQ
KISFNNEPTYAFYGTAYETFQKIKIHGGISGSLVLNEQGIPAGVLYGSFV
NDTEKITRKDGSTLTLNNALMIPFAQQKDITYTTFDGQSHTIYAYNLVDG
TDKAKFPHQIDSFREKLIEVYGPNYKTKLFPNGVGVFDGPSNHDINSEKF
KA
>MS53_0501 conserved hypothetical protein
MMKNFTEKVGKFFKSSFPGKWTTRKIVFVAILIAVSVTFTIISVQIAPFA
GISTYKVAFIGLPVKISGFIFGPVIGIFIGLVSDLISLIYIPPTTYNPLY
TLVVVMNGFIPGLFSWFFFRFINYAFGADFRTKLYKSKIQLYSTSYLVAV
ANPDSEKEANYYASKIIYYNNKKEYIKRFGTINLIKNINLIIALMILSII
ILFEIITIGFLIPDAYLVKSPVKNRWIIVALITTGLIMMMSLCIYGKFKI
KSSRYLVMVPIIIFSAVLEIVNLPILSFADLFALGNSSIKDIFLWIFQHV
FLAPVKIWFNIIIIYYSFSIISKLVNKTLIYLEILAVKNETK
>MS53_0242 putative phase-variable hemagglutinin
MASTASYLKSLSDSLKAETDKLNGDTTENKTAYYKADTTRTLYWDGFMPK
IVVKDYQPAGHGNNKDTNETANKTKLQEWFATSSNWEKLSEQLTRKLGSD
KFKNVTLTNPVITYEKVTVNTYTWKNPKVTFNIQAKPGYQLTEPTTDSKQ
ISLTIKVLYENQAYTQNLLTIQGAYPFAAPSNSSVNDANVKAKVNVYLNY
TDI
>MS53_0208 putative phase-variable hemagglutinin
MPKIVVSLLTTKPANQEYDANPRTTSVTFWKQRNGEILDVWFAANQDKFT
LVADQLTRKLGEEKFKNMTLSNPTITWDEVKFSKGNVTKLYLTPKVTFNL
AAKEGYGKATGSLETVTLNY
>MS53_0570 hypothetical protein
MNNMENSKYKKLLSLLENASFSKSLVGVSPSEIALFINNLKSELLLLESS
YNELSAQNKELKEQNENLVLENLKLKADLKLK
>MS53_0269 putative phase-variable hemagglutinin
MRDVNVYMNYTGPAIMLNADLPTVGGQENTSINGTSNVDGDFNTKFKKLL
VNVVGGSFTQTSLLQAIINYVNKFDPKYRAAFVTEKNGVALTSVQNNTQL
RIGSLNDFLWNNKGFLQQVNGDSSAVYFAVMGVTSEGWLNTFLIRIPLTK
FVRPISVLEEQSAQDQTQESQEGQENQEQGSTTQTNTESSGTGQSSDLTE
VSA
>MS53_0540 hypothetical protein
MFSYFWFFVFLIINLVSLWPIDYLYQYNSWGYKGNSSNIYEIPWQKEFSE
SDLEFFGHERPPITLVPSNLSSSLNNDNFIDNGFFYNELLDQYFFRPKQL
FGSYIKKWNNIYFKYKPFDGILIDNFFYLNNKYFSHIILSFLSFFTAIVF
VSASFVLNKWILSLIWIFIFISLILDFSGLLNRIDFDREGLYSISYKEAH
DFIGSELNFKKFLVKIPFSLFNPYSLLDVFTNFHFLTKKISMAWAFPIIF
ISIFNFWFLNFIIRTMKRNSEYSFL
>MS53_0237 putative phase-variable hemagglutinin
MSGSVTKAKEAKDDAEYSKVTDTIKTTLEEKYTAATALLEDGTKLKNLDA
SSNLDTTKATLESAKSALDAAVAAVKPDLDFQKTKTIAAAKVTELESLVN
TALKTELQRQVNALTKDHATEATTMLENLTSLKDSLTSLQDLVSKGLAMQ
VDYPQKYYDADNKSAFDNALLKASSVFPAFKWTAESIMVPAPEGAALPNP
RAWTKAREKSEFKLQNFVMAPAQAAPTTAPTESESRDGSGGGTSAAASAT
VRAAMSGEAEGAQEEDSEAASPTAEASTPTADLASTVSYLKTLETELKTQ
SEALNGDTTTNKTAYYKADTTRTLYWDGFMPKIVLDNFDSSWAQNSENER
KIREWFGDATNWEGLSDQLTKKLGAERFKNVKLTFKSARFSTDPAKVPTV
AFTVAAKDGYTLTTGDNASATEISLVVRVLYNRGSESTIQLPTQGASASA
VPNKTTKVNDENVLRTVNVYLNYTGPSIVLDQAVPAVGITANTSLNGTSN
VTGDFNTKFKKLLVRVLNGGHAESSLFQAIINYVNKFDPKFRAAFVTNGT
NGVTITKVQSNTQLRIGTLDDLVKNDRNNVFLQQIQGDTEAVYFAVTAIA
SNNWLNTFLIRIPLTKFVKPLTEFRPTTPTSTSSDTQQQGTAQTQSNQGS
>MS53_0290 conserved hypothetical protein
MKIIIFCFNKLKIVKLYDRINQLFDLKKEVYMYEDFRKNFIKTIKNERYS
NLLKLFSVINKLTYIWMENNNV
>MS53_0070 conserved hypothetical protein
MIKVKKNKIILLFGIASVALVSTAAISATVVKINSSYLSNQNAFAFNRSR
SLELIDRGRAESRFNSNTDNNLEVPQPKKDDPIKPTIVENPPIVEEKPLV
VLKPEPPKEEPIVVVAPPVQTPPQSNSSYDGSIINIQTITSTVSEKSDWN
KPTGKRLSAALQKQAREAIEKAQKAFNDVFSKLKPNADGTVKFTDEQKEE
LAKSLGVSTTNTKEYWYFNRFLKNFEEGSIAKDIMVHRDPSTAQANRDMF
LHAINNVDYDFYFSINNIPYIKWEYGDDITIGGKPPSDAENVVVQHQINL
NKKRFLSSDSKWRRYSPQMIADNDYFGWKQEDITSKAAQDIGISDTSGIK
ISKYTPDQNNATVTDKSTVRYALTLDASNPNAYAAVIRNLNLMNQHNYKV
EVFNVKHLGVDKSQDFAAVFRAMPDTIKLLNLFFDDTNTDALSGLKDKKI
QSLGLWTTKNQLDENWGIDPYVLKNVENIEYDYQNSQSGDYPRGAEIAGS
IIFRKLRFHKDDTIPQIQEGLKIALIEKADQRAFQGYWGSGSWPSELDFS
NVIAVKSLKGFTFGPANDLVFKKLTLFNDTFNYVLSASDLADSGFEHMLF
RDTKPSEIDFSNQGSTFNSYQIYIPGNTSDLKPNWVPQLQGLLYGGGRTF
KKTIYVDNQDMVQRLSKSGVPGLYGFSVQVKPNGYDPNKNEASLDFSS
>MS53_0499 hypothetical protein
MNNNCNNKIKKVIMKKVNNFWKKLTAAKTKAIQKQNEASKSKKQESLIEM
RLEEINNAILAYEHNVVDLDSKEAQMALPWYKRQLFLNLLGAGVTILLMV
FLLVLAYLLGGIV
>MS53_0156 conserved hypothetical protein
MFKFKKPLNSKSRKTKEAQYSKEQLKYQDFVYKNYFEILSQAKDSDEKFL
SYEQFVNQFYLKLNQKDKISEFNKLWKASYDSFFQKQQVVFDDFVLAWTR
NERFSLHDLVPYVSLSEDSNVLSTDLSAKNNDKTNLVFKHLNNFLKDYLF
EKLKVIEIFPNVILFLDENSKFKLLFDKSVVENER
>MS53_0355 hypothetical protein
MMRTMLEIAIEVISKDTTRHFTFEEIFQRVESELAEVWATKFVDEKNSYN
DVRVRKMGELYRILTVDRHFKHLQDETWKSSTYKIKN
>MS53_0231 putative phase-variable hemagglutinin
MLQTIINYVNKFDPKFPASFVLNTNGVALTSVQSGTQLRIGSLNDFLYNN
KGFLQQVNGDSSAVYFAVTAVASNGWLNTFLIRIPLTKFVRPLTEFQAQS
PTAPTQEASGDQAQADPQATQMGTQAQN
>MS53_0258 putative phase-variable hemagglutinin
MLYWDGFMPKIVVKDYQPAGHGNNKDTNENTNQQKLQNWFNTSSNWEKLS
EQLTKKLGADKFKNVVLTAPTVSYDDVSTAISTDSEVRIPKVTFTLQGKE
GYKLQTTDGASTTLSLSIRVLYTSENQTENALKYQGASSSAVPNRASSPN
DETTIKTVNVYLNYTDI
>MS53_0613 putative ABC transporter permease protein
MALLIILFSKDIMWNLFKETFLSLFKNKITIIGLTILVFLSTAVFVLLND
ASSSIKKEYSRYTKQSKLHDITVDLNIPNSGSAYNDGYYINSLDRNLGGS
FYDRPIHYIKSDYKTTSNILDINNIKDEYINLSSFVDDSNYVNKYLAKDD
FLRFYNIYDPNSTSALKLQLNFNQPQKTFTLPEDYSFQVYNKVNNAYQVD
FNNFVINLNDEIHFDKTYKLSDIATITFDNSKAIVSQLSTLFINVVSKQA
TFDILKGRQWVEEKSGYRVTMNDLVKFLKLTKTSQNNFIYNLNLANASDA
YSNLNSSSETNDIFNAALKDTFTFNLLSSKRLDFKNPTSIIFRKATSYKV
PNVIAAQRENIEYFERKHYTTTYDKDNADKWLGSYKIVIDNLKDQNNGEI
PKEFSDFSYWYKNVSVYFIRYDNNGRLDEQNKEKVLDFNSFVSLDEVKNT
KLSIGPLDDQYPNTFFYNYLLKEPQTIEQIEKFSNITTQQYNNLINPDIL
SNTFNYIKNQAKKVTQNSIVKYVEKKFGKDNLGLRQTVTVESVDNSGNKS
VFNFINLGNANNEINGVKLNVDKPFYESQDSTALSTLNNQDLASYFKTRE
LDPYVVQTLLLNAKHNFSSDRDYIIPEFDYWNVTYTKNTSNTVENLSNVK
IYKLANFIGDNPKPNSEYNKFNGYGIFSYGDDFVLVKAVYDDDGKITHWV
NADVVPSFNDVVRGGDIERFFRQRNLTLELQYINPNGWVKVDNLFSNIVY
LPFYFRAPKPDLIAEALNNNSIEKGMQEIQKALLNTDLYKKGFITTNEIF
VLIASATKVANDNNFAKIYAEGNINLNIVPKMVYQLIYELSHNPTGEYVS
KILTSFLTTAKQYVNTKEGLAKEIKNLSSIFSIFGFNEILQFLSLDALTK
IIENPSKVIDGLLQIVSSIDFRNFADKIKEFLDTEYDKVTTINEIDYTRK
FSLYEIGTWLLESIDQKRFKDGVNTIIDSINPSGIIEYVKQIFGPILGNS
FGELLNKLDAFKNTDTQYKNLTTGIKELVSLLDFNTLRSSLAEATEIHTF
QIENSLIDPITKKPFTKIENFTAGVINNADVVKSLLRALFSVPGSDKTFK
DIIIKMLNISSKGQVIQISNDQSLIIPADDPDKLGLFDLINLLGNSQQSF
SESKVEEKNGFTYGSDLFSNIITFLILHEKDSVLNFRNLNNTEKFIAANV
FRWDSKSRVTQKDIAAEIQKWAKIVKLFEYRPNANRYSKELSLSNLATYS
LNFTSTNNNNLFWQTTSNLIRQLVPIAEPTKFNYVKDGYQSMILWWDILF
SDEKISYQRKLDFAKDLLKLANEPSVIDSFNSFDLFQPSAENIIQHKKTN
FGVSRSIANPERMRELFFTKSGSRYTNIYLQKLADKYPEFREFIENNELL
ITQEFSYLASSDMYVRQGEDSNLDNQVPLKYKGLRSNLADNFLNGIASNN
LIRDNLDVIQYILKVGYSNNIGGINPVFLSLLGISNILIDPVLRYSNPQY
LIWALADTSSVNLNQDSVISNLAYFIQNKLVNFYNLINGNSNTLNVLLNN
LFKDYPSINPINEYDSYQTIAIDNDFFEKLKEKTDADLENNLFLGINFTD
FLLNVINSITSLNAANNVLVFNQNSSYVAKANYAWLQQNNKKIYSGEIPD
NPIKMLALLNSLPEDNILNVNGVKFIIIGQEITADYLYPVIDEENLQVDT
KSQGIIYVNQNGFDRIRNSYRNNVVKEYVVSKIPGETTDEQKSEIRNNIE
NYVQETIDDSAKIQRTYLTNELDGINPERSLRVRIIDSIISSINKSLIAL
TGILIFFVTVSVIFIIKRYIFNKNKVIGILISQGYSPWEIVFSMTTFSIF
IIFFGGILGYVVGFTSQAAVIHVIKNYWTLPIVTLNFSWVSLLVTLMIPF
LAITVLIYSITISSLRFKSIDLMSGVYEVKLGRVQRIFSSLFKSKKITTK
FSASLIFNSFWKLFSFGTSIFLTSIVTIFAFTATTVFDKAINETYKNRLY
NYKYDLKTPTVESNAYKTFNGSTLDNQLYVPLGHSSEINSYAGDYFRPGF
SNSINTNFANGNPEYNDPHVLTQFSLNIRINGGVSVDPFNLIFNSLPDSQ
KNKIIVIRNIIGKELEKTQDNLVYNSNNEIDISKTSKINKVGFFGYIPDN
LVIQNGKFWYFQYNDAKNEYERVQITTGAYRNEYRQFLINGYKKLYEDPK
KTQDFLISFGGIYLDNRFDETYTYAQAIFNDNSINLYGYRPDSKQIQVYD
NNVNILKKINDEFDANPDLNEPIPLIINEVARYKYLLQRNQIITLKIENT
TDRFKEKFDKEINPNRELSDNTYKFKIVDISKTYINTEFIIPHQAANLIT
KLDKLNFGEDTGPFNGILSKNEIPSLLLSSASLYSYSNFWGVVAAIDTNS
MSRIDKVALFNSLFGSKLTNPNDFTEGVLKTNGYSDFEIAKFINPNFNQN
DRNAIYDNYHQTINNPDGAINKFLAAYNDMPYVIVASNLDAKNIELSFTT
ITANTVKVIITFVSIIFFITSIVILIIFSTILINENTKNIAIWSILGYSN
KEKVKMFFGIFIPFILVAFLLAIPLAIAIMQIFSITLTYVASIAIPSMIN
AVNIFATLGVVLGVFSITSVILWINMNKIKAVDLLKGK
>MS53_0240 putative phase-variable hemagglutinin
MALYWDGFMPKIVLEGFDSRWTNVNDNKSKLQTWFNTKANWSNLEDQLVK
KLGSEKFKNVVLSQPNVTLETFTWNRQTWGVPTVTFNLATKEGYEKAKNS
TNTIALKIRVVYNSNNTNEILFPIQGASSSAAPSGANTANHTKTIKDVNV
YLNYTGPAIVLDATLPEVGKVDNTTTNGTSNVTDDLNTKFKDLVTSDQRT
NCITIFPSNSKICKYLWS
>MS53_0214 putative phase-variable hemagglutinin
MTIRNLYKEANPDTNVFATQGASSSATPNNASQANDATTIEKVNVYLNYT
GPSIVLDADLPQVGTAANTSINGTSSVTGDFNDKLKKLLVSVLRGARSIF
IITSNN
>MS53_0203 putative phase-variable hemagglutinin
MSDQLTKKLGAERFKNVKLTFKEASFSGDDIKTPTVKFTVAAKEGYTLTT
GDNASATEISLVVRVLYNRGSENVIQLPTQGASASAVPSNSSVNDAKVKA
KVNVYLNYTGPSIVLDETHPTVGATPNTSLNGTSNVTDDFNNKFNKLLIR
YKAETSLFKAVINYVNKFDPKFRAQFVTNAIDGVTITKVQNTRELRPGTL
DDLVVKNKNNVFLQQIQGDTEAVYLPVTAVTNDKWLNTVLVRIPLTKFVR
PISVLEAPQQEETQEDGEEMQQGNEDGTQAGQTDETAGSGTPQASTPQTM
PNSSQ
>MS53_0244 putative phase-variable hemagglutinin
MQTAPAAETPAADLASTVSYLKSLNDTLKAATDALNGDNPTEKTAYYKPV
NGRTLYWDGFMPKIVLTDFDKTWEQNSENERKIRKWFDNAANWVGLSDQL
TKKLGAERFKNVKLTYKEVTFSTNAVKTPTVTFTVEAQDGYTLAEGQDAS
AQEISLVVIVLYNPDNESTIQMPTQGAYYTAAPSDANADNPASAIKNVNV
YLNYTGPSIVLDEALPTVGKQENTSLNGTSNVTDDFNNKFNKLLIRYKAE
TSLFQTIINYVNKFDPKFRAEFVTNSINGVTITKVQKDKQKRDRELRPGT
LNDLKGNNLFLQQIKGDKEAVYFAVTAIASNNWLNTFLIRIPLTKFVKPV
SVFQATTAAPTQEASEDQAQADPQATQMGTQTQS
>MS53_0255 putative phase-variable hemagglutinin
MLIYWDGFMPKIVVSLLTTKLANQEYDASVRQGGVVFWKTRNGEILDVWF
AANQDKFTLVADQLTRKLGKDKFKNMVLSNPRITWDELTIPEGTILTPKV
TFNLTPKEGYEKATCSLETVTLTIRNLYKAAAPNTNLFATQGASPSAAPR
NATVNDANVKSKVNVYLNYTGPSIVLDADLPTVGGQENTSINGTSNVEGT
FNNAFRGNPSSGLLFTNRYANPLLKSVINYVNKFDPKYRATFVTDSKNGV
TISNVTNNVQLRPGTLDDLDKDNVFLQQIKGDTEAVYFAVTAIASNNWLN
TFLIRIPLTKFVRPISVFTAPVVTPPAAETTETQEAQGDSASQSSPQTML
NSSQ
>MS53_0315 hypothetical protein
MVFYLIADRYNNNQDLYQPTQGPYNESNSSKWVEFKITGLNKINVEDSKN
DLLEKFNLSIKENVNHSLIANLIKEKSNDQSWFEDKTSEDSLFNALSFQF
LETLLCLFKNFWFL
>MS53_0209 putative phase-variable hemagglutinin
MPKIVLDNFDKTWEQNSEENERKIREWFDNAANWVGLSDQLTKKLGAERF
KNVKLTFKEASFSGDDIKTPTVKFTVAAKEGYTLTTGDNASATEISLVVR
VLYNRGSENVIQLPTQGASASAVPSNSSVNDAKVKAKVNVYLNYTGPSIV
LDETHPTVGATPNTSLNGTSNVTDEDFNAAFRGLLFTDRYVNPLMQSVIN
YVNKFDPKYRAMFVTNAIDGVALTKVQNKKELRPGNLEDLLYNNNVFLQQ
VQDDSSAVYFAITALTNDKWLNTVLVRIPLTKFVKPLTAFTATPASAPTQ
TDSGTGAQTQPEEQS
>MS53_0341 conserved hypothetical protein
MKKLFLWEIHSDKVSLSESIYIDNLNYSNIANYMYNLYGQEMHNNLAKMS
QKVSEIKAEENQKINFVVFDSSFFAQNLNSKKFQVSLSKREVLNSYQEFS
SENILDLVDKKIYAFLEENKINYVGKANIFSYVTLGHSQEDSLFQVEKSY
DNFPKNTDFETINIFFSVAICEDQVFYNKYKKILEFLSFDNNFVFYKESL
LASYKAGQKSKKQNYFLLKLNQNSSEIVLRNKNNVIRHKNLFSKLSSKVN
LKAKNQQLKFLNNNLNLDLNSSDLTFLKNNLSDFAKNLVDELSYLPIENL
EISSENVHLANIMATLLKAQKTSYSVESIFNLNQENSFEKFLLNQAILNS
SIINSNELKVENQTVTTNIKPNLNKRWFSFNLFKYFSNK
>MS53_0063 hypothetical protein
MTFLFLLILAGASGSAIYFLYQNDWKLKKDKASDSDKRFEFTSQENVFPD
LDAEYFQKYIKLNSQNKEEIKQEIVLPIVSDVLSRLKSAEGKVEFDYTVK
NTKNIEIYFKYKNGSNYQTKAYLVYLD
>MS53_0495 conserved hypothetical protein
MDFLKNGALLYVVLGFLIFGLVGWILFTYIRDKINKKKIHLAGVELDKLT
KKYLAKFDVEINEVIAQNKRYLEKFVVSVGEYKMGELTNFSRKKVIEILE
DSDFKNYVLENPKYAELVKNLSELKDVKSNMWESKALHNLTYFSNELKKL
TSVTLTEEEEREIKEKVALSYGDNLRKKKKTS
>MS53_0157 conserved hypothetical protein
MNVKSLVNKRESYTKIKKIVESDKNITLINILRLSKQNVFYFERSLQAKY
YIESLAKRYEIKHFLILQKQLKILSKLSRVKSIWVYITEEEKFATNSYQR
HERNMKKSIDFKRDFLVVIGKRANEFAIKHKAHVIFSHDKNDVEFLVKIL
PKFLQNYLKTNGFHNLNFVINSSKLKEAYLSVLPLNKLNFKIERNLQNKV
ESVDTSKLKIYPEIKEFINSEFESYLTYVSLSLLSESALISEKYKLVALN
KTLNDLDEKLRLLNIRIEREKRELEVEQISILFKKKDLLHSSSIKKEGS
>MS53_0419 hypothetical protein
MDFNNKLNQRINSTSDMSYVNYENLQVLKRRLTHTKNLIITGLVFTLVGV
IILVVGGSMLAADTSGFASISIMFLGGLLATVVPIVFKVYYTGRVWSLRW
EVENKYLTNDQETYHQKADAVSALITAKVLVSISWIALWLILDFVAIFNL
LKARNILDTLSKN
>MS53_0189 hypothetical protein
MNLKNTNYADAYKVPSTKSDNVKIAEARLNLEQRDPKQGFVCNCTILLSQ
HYGWQHIKNQEQLIKSVLDKAILGETLSRTEQELLDSLAKDWKTT
>MS53_0192 hypothetical protein
MHKYRKDGLSQSKAFFYCLGLGLIGGEYFYLKLKKLALIKLALAFVGATI
IFVTLVVLANTQSPVLSDETKKAIDLKTANVFNQFTDKHQNTQALLPAYV
VGGLLIASNVVWTIYNAVLIHNGEFKDNKKQKISQWTETQESYLEHLLTK
SENWRH
>MS53_0365 hypothetical protein
MKPKKSQQDLSQETNFELLREITEKQQIILKKHRVSYGVWVFLNFLSVFI
TSAIIILNLYAIRYNPRPDETMSFFVAIAILSATITFLVSIRTFFAISDK
KEKLNYIIAENQNYIEQLKKSIKRKKNKTSGEPEENQNNTIEIKFNLDK
>MS53_0249 putative phase-variable hemagglutinin
METSRSVTAAKAVKDDAQYNSVDETLKTTLEEKYTAATALLEDGTKLKNL
DASSNLDTTKTTLESAKTALNAAVDAVKPELDFQKTKTSAAAKVTELESL
VNTALKAELQRQVNALTKDHATEATTMLENLTSLKDSLTSLQDLVSKGLA
MQVDYPQKYYDADNKSAFDNALLKASSVFPAFKWTAQSIMVPAPTNGALP
NPRAWTKAREKSEFKLQNFVMAPAQAAATTPTQPAAVESTSATVIVAMGE
DSAEEGAQEEDSEAASPTAEASTPTADLASTVSYLKTLETELKTQSEALN
GDTTTNKTAYYKADTTRTLYWDGFMPKIVLDNFDSSWAQNSENERKIREW
FGDATNWEGLSDQLTKKLGAERFKNVKLTFKSARFSTDPAKVPTVAFTVA
AKDGYTLTTGDNASATEISLVVRVLYNRGSESTIQLPTQGASASAVPNKT
TKVNDENVLRTVNVYLNYTGPSIVLDQAVPAVGITANTSLNGTSNVTGDF
NTKFKKLLVRVLNGGHAESSLFQAIINYVNKFDPKFRAAFVTNGTNGVTI
TKVEKTKELRPGTLDDLEKNRNNVFLQQIKGDKEAVYFAVTALTNDKWLN
TVLVRIPLTKFVKPLTEFQAQSPTAPTQEASGDQVQADPQETQMGTQAQS
>MS53_0068 conserved hypothetical protein
MYRYKAKLASTNEVIAQSNTIEDLEHNIVTFRRLQKYAVHTRANDKIQIY
HIEQNHKIGKRASKEVLIKVV
>MS53_0264 putative phase-variable hemagglutinin
MALYWDGFMLKIVVDDGYVEDIEENNKENNKNTNQQKLEAWFKANQDKFT
LVADQLTRKLGEEKFKNMTLSNPTISWDEVKFSNRGSNKGYLTPKVTFNL
VAKDGYTLAEESAATVTLTIRVLYKDSNLTRNVLSTQGAYYTATPSDNAT
TIKKVNVYLNYTGPSIVLDQAVPAVGTANNTSLNGTSNVDNDFNNKFKKL
LVSGTTQTPLLQTIINYVNNLTLNFQLHLY
>MS53_0117 hypothetical protein
MMKNVSEFTNFKNFYEKLHSNIKAHYNKEINDLYKRLNLKKKLKIFYSLM
GVFIAIAVALLITVIVLYKKEGFSFVIVFLALAMFAFGGLAYLMFFFADK
YKERFNITVAKMLNKRVIYKEAFALLDEQFSYDEEYPKQYRDTLNEVTVV
ELKKLIRPILFKLKADLETIGDEEKITLSPSHDAYFVNMDIKVEVQKNRN
NSPMYKFLKTTLLKIDTKNLGDKGFAFAAAFENSKLIKEYNDLFKSFRLQ
KVKLESDAFNKTFNAYTNDELKLRMMYTPLAMENMVKLHQNSKSVQKISN
LVMISDGSAIYFVFTADMGFMEINWEKDYSNPDQLLRAIINDVALDIYNL
YILISYAYIPYYLK
>MS53_0266 putative phase-variable hemagglutinin
MKPNDATVIKNVNVYLNYTGPAIVLDEALPTVGEKENTSINGTSNVDGDF
NTKFKKLLVNVVKGGSRWIFIIPSGN
>MS53_0366 conserved hypothetical protein
MFQKHWFVKFLKFFRIIDIEKKPISEREYYSILIKVKFDVYFLGLLYWVL
NIMSVVSVFVLSVLATIFLAGTVKYNNGENPFTSYLNENRSSNYILLTAF
INTIITFVSGTLSFFVINAKYVNSKDQYQKLELEKMLFDSNIDVYKNKDQ
KEKEYILYKRSIQIINYNRYRKDTLISMVKVDKKPEVKTKESKTNDSEK
>MS53_0662 conserved hypothetical protein
MKDFMKLKWLKKLIVPTSLVTLTTAIAISCGAPVADDKKDGEKKQGQQDN
PKAPTNPSSSLVDQKAFDAYVKEHNSLIYNPAEKGSDKDNYPTNFDALKA
IADRSFSLYVGMPNPQASYVGTMWLLDYQKISDTQYKMFFGTNFHVAAGI
VTAQNVNENVAQNDVAAENRPIGFTIRAAVGTNPNDRNATTGRNYYETSV
LSETNKFKVFWHARNFVKRSEELNQVIAPDKDLYTDFSVLEWDVDFNDIQ
NNPNFFFNPNLRAEISTSTNGSNTVVQTVSDEVAAKRKANNDRFIEKLKN
AVAAVDNQIALGKKTTLYNHLAGTPFNFDFSTSLNVKDKYEATNLIYKRP
TTPEQLQSFASSLTQQEKDFLETKYVDTPRWVNLYGFPLIQQNEGFGIYA
SIWQEAGEPNKLQEKGWDVYPKFQSLFRFDRTQLGKESAITLQDGRKIIQ
ASFNNKTLYFYGYQYKVTTPVDVSGGVSGALVTDTQGLSLGIFNSKDNSF
VTASDSERPELGEWRIFNIFVIPFTQMEKIGRVEAYNLIDGTDKTKFPNQ
TSSYRDQLRLVYNSGSTKFKTALFPEGA
>MS53_0230 putative phase-variable hemagglutinin
MPKIVVPTYEPDTTDDNKAAHEEANKTKLEAWFTNSANWVGLEDQLTKRL
GSDKFKNVKLTYKSITLTDFTADKSKGVTRWYPTVKFNVKANEGYTLDTN
SAKEIDLVVRVLYNSAEANAANVFTHEGASSSAAPGNPTEPNNATVIKNV
NVYLNYTDI
>MS53_0316 conserved hypothetical protein
MKKRKKFLNHLITAPLIITSTSLIAISCTGGSNQGQEITAEVTFKDGETE
VSKTTFKGREEFSINLENHVPFGYDFKENQTLLYDVKQNTSVTVQVQQKL
TKFSLVDRATRQELAKVEGFFTDRDEKLTAFLQVNLPTNYQLDSRFTLDG
VHLFEDNTVFLSKSTTNYTTTLNFKLQDNTVVKTVTLNLDSNSLLSLSNY
VPAGYELVDKSQRITFNQSNDFVVKKVEASQSTPRKSDVINQDKVVLDQS
NNTRNSITINGPAYILDTLNLSRTTFPSDVVFNSSFSVNGYTFLNVVVKS
YDDALGTLSFSSTVVNSSNPSVTGEFDFNLSGLQQTKRIFSVGTDFNENS
LYSKKLTNATADQLSKEEILSGLKSFTGVDQEFTVNYDLLDLIRKNRVSV
NTMQIQDNGTMLNLNLDLLSKRLENGEVTETKVRLIDKEVSFNTGYSLNG
ELSYILNNKVSVASLTGSSVQNQYPSYYWGRIKKGIELANTLLQFDPTFV
NNQQVKTTNDKVIQVKYENLVPNDLTGELTFDAYLVALDSTANDGNIQSS
RRRFTVGGLNKLNTKMSLTDPVLSKFDLSIKSSGNKSIIANLVKNNSTDT
NFTNKDTGSLFKALSFTFLLSEADEAEQKNNSFWDLKFNNVDLQSAYDSE
TKLLKQNENELFAPYKIEVEPISFSNYSFNGTTVKFTLNVNLKVTLFAGD
DKYEFTKSFRFDNQTLSTSSSSSSSSSSSR
>MS53_0556 hypothetical protein
MKTKKLNLLKVVAFGVLPVASGAALVSATSSVNSINARSNNFWSSGEDFE
NRVGFTFKDDRWGVGSFNYTGGKNALIMMQNVLNTIV
>MS53_0555 hypothetical protein
MMVSRDMRIIPESLEILAVPQNSKQPASDFDKYAWKLKDQKDQWKYQTQN
DWTYIDYNVGFKNSTVSSMSMWHKSYFGRNKFSSEANRWEVASWAESRKH
LQEHNGLGLFFLNRMYNLNKAWQENVYKRWKAKDMLPTPKLSWRSKNRER
YSKYTGVGNGDAWAAKAQQLNDFYYRSFNSVDLAGVGETLTLRLKQHTDR
YKKEQGWKYVLRFKTEFSHKYYTEETARYYDKFKAGSSGQSFVALGYSTN
DWNYQTKYQYKALFLQKADRTGNEKFDVNVKEMVDSKYKGFKLPKASFKL
VNETLKALAAKDPYVPEMNKNNFNWDFTSQRGQKVYQTQALSARRAQSSN
FNARFEMM
>MS53_0471 conserved hypothetical protein
MIKAKKIKLLINFGAISILGVAGAVTAKVIIDNSSDKARDLNVIIVSRGD
KSVLNLKNVETDDINSSNKDNNLKEIKEETITPVVNDKEENQVESPVEPE
PDPEESNKYFSDVTKPIENPQPEPPVESKPPVKPKPEPDPEPIPEPEPKK
PTIEDMLPQSSEGIVNINNLPDLDFSTLKPVETPKGQLSETEKRTIKTAI
NNLVRISQNIPTKFTQEQIDEINKSINDIRKLNAYTKNEKDNDWSSLLNG
LIVNDGRTTEEKANAIGWPYKDNRHNYSLSFKLMWENYQRDLDAMLAKGM
VPSLQWGSFGNVWGFADHSDNVVRNKLIADNNRRYFPYNTEYKRTSGVIR
NLDYEGFSKTDVTNSYRNYGAESNKGITVLEYTPTSDYAKSQVGTKRVMA
VLDATNREGYNSFLKFLQDATKAGKKIDGIVIRNMGLIDKTQDFSQILAQ
MPDSIQKLTLFFEGKDTSSLIGLKDKKIQEIDLYNSSNTIADDWAINPYA
LKGVKNITFDYNYDIGFPGIPGNNRDMPGSIVFNTLKFDKGMSLNQINEG
LKIALNDRFGERIFQGQFGDGSWPTYLDFSNIPEIRSLQDMNFYDRVFKK
LTLFNKTNVFTVDAKTLHLQQWSALLIKGPDRPKLMFVSPQKVDTLYIKG
NAVDLGNNWGPELYGLIESGKAVFNTVYVDNEVMANTLNNSQAFTTFGKR
AIVKPSNFDTNGGNSEIISFE
>MS53_0171 hypothetical protein
MNKAAVKKSKLLWIKNRQFIIGFWFFTILLSVANLLWSSRVIPLYYWLDF
EIDRTLRIFLALLFLANIFAVGFIFCIYSKITINTLYSVMFFACFISSLS
FFPQVLINSETNKTQLLFIYFKFDTALFFVLHGAVWLLMLVFLKPKYIIN
LRVKIKNKKITKN
>MS53_0248 putative phase-variable hemagglutinin
MADLASTASYLKSLSDSLKAETDKLNGDTTENKTAYYKADTTRTLYWDGF
MPKIVIDNYVADGYDVANNAENNRAQHEAANLEKLRTWFATPANWEKLSE
QLTKKLGANKFKNVTLTNPQVSYEEVTINTYTWKNPKVTFNIQAKPGYQL
TEPTTEPTTDSKQISLTIRVLYENQVSTQNLLTIQGASPSAAPNGANTAD
HPQTIKDINVYLNYINQFKLTN
>MS53_0245 putative phase-variable hemagglutinin
MLIYWDGFMPKIVVQGYEADGEEKGKATHKEANQKKLEDWFAANQDKLSL
VADQLTRKLGKDKFKNMVLSTPTITWDEVEFSNKGSNKVYLTPKVTFNLA
AKDGYALAEGSTTTVTLTIRVLYKDSNLTRNVLSTQGAYYTAAPKNAIVD
DANVKAKVNVYMNYTGPNIELDADLPRVGEQENTSINGTSNVEGTFNDKF
KKLLVNVVGESITQTSLLQAIINYVNKFDPKFPAAFVTEKNGVTVASVQN
NTQLRIGSLNDFLYNNKGFLQQVNTDTKAVYFAVMGVTSNGWVNTFLIRI
PLTKFVRPISVLEEQTTEEETQESQEGQENQEQGSTTQTNTESSGTGQSS
DLTEVSA
>MS53_0099 conserved hypothetical protein
MKINFKSTILQNGETKEFDFTASVDIDRYEDMDTFSFTEPTQNVANRIEI
SHKKINIFAGATTLFIEKDKNLASPFILNTPDGKVMEVNFYTRLLNLEID
PLNKYKFEYILYRLNDYQEDVIGNFKIELTIS
>MS53_0359 hypothetical protein
MNKINIKKWNSEIKSFFNINLGATTIRKNKIINLFLNKNLNRIHGLKIQI
INLIGNKIHSADEIYNIILSCVIDSVNNYIKQNISYKFEAFFWTDLKFKT
LTKLNKFANSQQKFEYKISNSQVNLKNLKSKITLANSEVFLDSQISQKLE
KIRPTLTENETRFLTLYKQNKAHLYYSGFMQNRLISQLKAKLESS
>MS53_0594 conserved hypothetical protein
MFLDKNKILNYSDENKLWNDYNKVFFHYVMWFIAGLFSLFLVEAIQLLLL
VVYKNDILLSFYKLAQQQNLSNQESFAIQSFNQQLGIQIFTALLYLGIAV
YFAYTTFASRKLKSYYHLSSFVINTLAILIIVKVIMLVVFTTNSSVGPIT
GTEVPALIAIYVVSVVASVLVGLVFLRPVSLIKKSFVFARRRNEFMKMQE
MFKNSQSNPNGFDLNAFFNHVNNQNKDPYMKSQDEQAYQDNPYTGQNDKA
QNVKSEKDLKIEKLLSLPKEQLHEIAKILNIFGYEKLDKKELAEKIYNYT
KDKK
>MS53_0219 putative phase-variable hemagglutinin
MALYWDGFMPKIVTTALPTTVAPMNREYNESPTGGHEFWKGRNKQVLDAW
FAANQDKLSLIADQLTKKLGKDKFKNMVLSTLTITWDEVRFSKGNVTKLY
LTPKVTFNLAAKEGYALAQDSATSVTLTIRVLYKDSNPEVNVFQTQGSSP
AAAPSGSSVDDDNVKAKVNVYMNYTGPAIVLDQDLPTVGSANNTSLNGTS
NVTGEFNTAFRGNPTKGLLFTNRYPNPLLQFVINYVNKFDPKYRLHL
>MS53_0188 hypothetical protein
MAKVKHVYKYLIAAVSFLVAGGVSLGAVKLYSDNSSQTKGALNPAENELV
NVFLAKDSSPELKFLLQDKKTSVASFGKYQDGQDNLDRVTYSGRSYEYED
FFNVFYLQNGFLPVLEISYGSFKFYNEYLEAVPPHEFLKFAQWFVKNVSW
GPDMLTLKSFSIVKGVQRDGNSITLGQHLNANKELQTIKFYPDAFFGSLS
LYSFLAGEGNLQDSLLYRLNSVSITEEELNFFLKNAKKLNILANEPRNTQ
QSNIKFRNLLAAQRLQNRKLYVYSDSEAGVKQVVFLKEYDPESASSQSEA
QARLRDLLKDPSFVFDSSKLKEYYVSGLGMANADLLSKTYPELASLDLTP
SEEKETNLKNLPVTRNGRMALYLRFVDAAKGDGAIEAAKKAEEALEAKVL
EDLQTNANDTDAKAKVAAELDAIKKALYTPDETLLVTDYDYSAQALSNLD
ELEKYEFSQPTVDFLDYYDLKSLIGKTFNLYQSPQPQQDQSESQEQSETQ
EQGSTENTENTAPAVAPGFPGATQPAAPQTSLMVPEAPVKSDATDAMAAT
VVDLNDKKNLTLFSPNGKEVEFAKNYASLVDERNFKDPETGKVDFPAFDT
NLLSQARVSDISVENGVLTVDLLTHNAKYRYSVDAKSMSDRDWDFVQELF
SKAGYVKYLDPYLVNLDSDIVTPEGKRERTFTLYYSAYQNLLDNISRKMP
YLLSDRTGPHVVKKVNDQGVVEYKLEDGPYKGFSSDDNIGLWAVLKLSDP
KFKGMSSDFLRFVGAHEYGHHITLTGAQDLGDKQYDPVLASAQSPRGATN
IQNFISKENLDLYLRARTHLEAKTTNLYAQGEKEINSLPESNTGNFVNYG
FQKKDGSYAYETQSDVWGAPKADPSIVRALTNPKRRFLQNFEGLQKALQE
RKKDYNLSDNVDLFDLWLTNAFDEQSGTLNPTIEGTAQYFQVDTSSPTGY
TFKDASNDQIKDYLKDGLGQKIEYSNGGFVLFKFVPYDPQNGLFKLTSNK
VRRENGELYVNIPEGSVLTTAQFSELKRIEREFNENVNNFIVKRFSSNGW
NTGTAITDTNVQITNAVPYSLRYTSQDELVNGEYSKATEFYKNFVNKRSW
TNGLFGNDEFTFRTAEADDYNITYWPLYFAKTSFYGPENYRNALIFDEGA
LTKTREYAYNFPVRFPGLSIAEVNKTLTEFLTLFPRTLTPQERSAKQNQI
RTEAERRKVFDVFMQTSYAWRGHLPEYNVVDTLGGNKLFLNSTHQYVPNF
AQRRVVYNTNTKETTYKDPYKSSSFLNNTPISISNVVNGLVWFKNLNGRI
YSDYAPWMRPIGAVDNDGQQFATAYFFADENGTEIEAESPDETTKVDLSK
RNAQTLVVNTDFGVSDVQNGVFGAIKLSPGKDKRVLNDLEEMFDFMTVDY
EKAKATYDAATKQQVLNWDIDYVEARLDLETFRSRYLSFLQNYKGRLFTN
KERQDLIDLYSKPLSETKQEVANQAMQRFLRSGYVPFAKDYQLKNFLAKR
DNLWVLDKNVGVDNLKSSFVDLTVTDADDNRNVDRYLKFVKEYFDKHQIM
YDNLTLFDLHLLTGITWFLPDAKTSRGFVNKEAGQLTVRNGVSSDVDLYF
STKISSETGSIFSDYVYSYAEQINRDYLQTTYTPSYDQYGNRPDYISGIT
EVTTGLEYIVDATASNKYQNFQVDSEVTNNMLISNVIPYYVEQNNRNRAA
KNGLPNYESSKRDNYFYWLPKYTNNFFGKIRSFNNGWYKDRFYRTKLNWE
LYDEHGLDKQDNSIRIKDLLGQTVTSRAKAYWQYLIRSQGIGDRTLSGFW
RDSDKDAVAFYGYFDLEKSQDLKYLAFENTATKEVSYLPVHVSHTNNLFY
YTKQAPENGYTDVNRHYIKDEPYLDKKTNTQRVGFASWVSDYALVSQYRN
RLVSPGNTYNVYFANSNKEKLEDVDLGSLVSMAENGKLFNQSPLTVQKVE
NTDGTHSAVLNVKDQFNSN
>MS53_0335 hypothetical protein
MIMKKPFKKLFILSLSLPAALAASSCSSFSFHPYKNTYNEAFSKVEAKHN
KLENSSNKYLKAAFDNYYENAKKINQDSIDNPDHFNDNIYIQLGASINAI
LKSVEIIEKDVLRGRQPNSPEFLEIYELIWGKISEHQSQLETLIINSLNS
IASNITSTNLSQETLDKLKKVSDSFNNYISYYYQIIKTHKSSFYETLKFS
QSFDDKKSLEIINDINSKFLLYTNYVNEIMTNPNYNYIENENDFKITILG
D
>MS53_0451 hypothetical protein
MKMKTKKEQKLVTGSLIERTALYITIQSHNQLYRVYKNNLGKDVTLQNCY
NSFEKDQKVEILVEIGVKKTKYILANLNKANCKITISDETENGFLNLKKF
TDLEIENYT
>MS53_0668 hypothetical protein
MKYNFKESSFALFKIFKKYIFIFVLFSCFIFTFDFLAVRFYAHLIDNLSE
NKEKISLENKDICFYFLVLFLSIILTFVYKKFNCVFWK
>MS53_0261 putative phase-variable hemagglutinin
MADLASTVSYLKSLNDTLKAATDALNGDNPTEKTAYYKPVNGRTLYWDGF
MPKIVLTDFDKTWEQNSENERKIRKWFDNAANWVGLSDQLTKKLGAERFK
NVKLTYKEVTFSTNAVKTPTVTFTVEAQDGYTLDNSANEISLVVRVLYNR
GSESTIQLPT
>MS53_0543 conserved hypothetical protein
MMNSIYILIPFIVISMTIFLFIVIKFIYLTKKMERGVILFKIDYLNKRVL
RLNKKSKFFNTVFDSKKLNFTTSNYLSLNTFYDLINKEDLTKIKDYLDFQ
VNQKEKIDFRISKSASKHLTFKEKIIWKIKNTKNNSISFVLTINPSQDAI
YYCTLKWEFNNQNKTKKIIEDNSESYVRAIKTNKNIAVLAFSLKTYYYIN
SINLFDIYKIVFFLNIPKKSLRFFQKDGLLFFVFPDVKSSKYRKLLSYAK
NIQSLSLANKYFINGTIFKNKNYKTLDDKALIIKKAQFCIFNLFNLNICK
KTNNLLKLNSKTTEEIEVKNKESLNVFYNLDLHAEDTNSFLDFHRNLEEY
IHENAVAKNFQIKKSYLYKYGSEPKQEFSPKDVGYADVEMTNIRESDQRF
FRNIPYLNFVFEPIWFDFIRKKQIELLKEENLKKDYVKKTMVKVSQESYL
NNPNNYIESSPSVVIYSYKNNFERQKLSKIISQNKQNKVTTFLYIKEIDR
STLHTVSVCDFSAVIIAKEISEKIHHNETLLNCISLISLCEKKNIGIIYE
NAPEKLSKALTNMAKMNFLIDKI
>MS53_0672 hypothetical protein
MLTLKGLMELTKIKQIFFEVISTIPGIVNINNINGGDKSARLLDRINVKK
ENEYLSFYVDIDILLGVNVSSLVQEVSQSLHFKFKSSKYKIKEISLFVSG
VIYE
>MS53_0087 putative P37-like ABC transporter substrate-binding lipoprotein
MEVFIFNFKKLKLLLLIILFSSFVASSCGFASQNEQKLQWDATLTLYGPN
SGNLFSENLKSAWIKKVQDKFNELKNSNPETKNYPDVVFDLKFLDDKNLI
FQNLNNNLENYDFGILNATTILKNKNSDLISHPLLQTKTLKFLWSLDDSK
TYVDGSENDPLITAASEANKIQFENELYGPYSSWNDENKKILLKWDGSKY
NVFYKDFHDSNNFSSVFRGSILISGTKEIRDEIIKAWNDKNWEKFLSFGI
VIRNFESLSRYNAQVEILAKQFNKNVSEIKTELQNPNNKNVLIGRASNSL
GVLSNQGKVFNIAFDYEGVFNWTPPYYGSGNLIYNFKPSDNNSSVRYLTF
TNPIIYDQVFARRGLSEIQKELFAKALASLSFEDNTYGNYTGYNQFSLVG
NNEK
>MS53_0250 putative phase-variable hemagglutinin
MPKIVVDGYVADGAGANKAQHETENTRLLQQWFDTPANWEKLSEHLTKKL
GANKFKNVTLTNPQVSYEEITVNSNTWKKPKVTFNIQAKPGYQLTEPTTD
SKQISLTIKVLYENQAYTQNLLTIQGASPVAAPNTASADNPASVIKNVNV
YLNYINQFKLTN
>MS53_0056 conserved hypothetical protein
MIMVNFSFPLSKVEDLSNYKPGFFSWFGTKAYWDSNLPAFIKNGNFFFIF
AIVVLFLLFVGMWVLKRQIIAKYKLSLQNNSNFYKYFHMTLGITILLWMI
GRSLIIYFVMGYPRYWETIPVHFCRLMGIMLGVLLITNKLKYIKYVAPLA
VLGTLMALLSPDLTMEVYFDKNVSQSDLDALSAQKIFLSGRDQYINFKVE
EVFKLRWGIFNFIFWDYFFFHTFLLAAFVTINFLNPGKLGLKEISKTLLV
CFMFVGAMASINHLLDNSPAVSINWKSNYWYLGTNEINNLSTLVPPFTEF
PFSIFTFVLVGVVYLLFVSFMLALQDKVYINVFAKGKQVKFKIIESENYL
YWKSSFKLAFSSLLKTMKKLFRKA
>MS53_0259 putative phase-variable hemagglutinin
MKFWDGFIPKIVVEGYQPAGDGSNKEANKTTNQKKLEAWFGDAANWAGLE
DQLTKRLGSDKFKNVKLTYKSITLTDFTVAGATRWNPTVKFSVKAKDDYA
LDSTSAREIDIVVRVLYKSAEANAANVFTHEGTSSSATPGNTRTVSDTNV
LRNVNVYLNYTGPAILLDADLPAVGGQENTSINGTSNVDGAFNNAFRGNP
SKGLLFTDRYPNPLLKSVINYVNKFDPKYRAEFVTDSKNGVTITKVQNTK
ELRPGTLDDLKGNNVFLQQIQGDTEAVYFAVTAVASNKWLNTFLIRIPLT
KFVRHLTEFQAQSEAAPTQEGQTTQGQEKSAGSGALGSTTGTQTPSGGSS
QASGS
>MS53_0429 hypothetical protein
MWNSMQSLNSALQQEYSADVLNDAIAENSFSSNISSFFSVSFPDNLVPNS
FSALKENQSVAETAQVNATLKSIKDSDLKLYNDTFKGVFDNLKALKTYEF
SSTNLLGDSKVRATFYKAGSDAKFEVDATKVNATFNLTSLSETSLVKEVN
KTGNYLVKVSMNAFSIPLSILKAFQARNLDLGPVQSLGSGYRFVGLIPFF
VRNFDFTSSQNQYTLKLDLDYKFGSQEKFLTENQSNLTEANTLILLSNNF
LQQNVDTSNVNLDLYFVVTDSSQISKFDSFLNNQEKTNLNVSFSF
>MS53_0158 conserved hypothetical protein
MKIKLKKKLLTSSLLASSTALSIVAISADTDSNTNTNNNGTGGGTTPKTP
ATPPKNADDFDSFKGELDKKVKENVEKLVDDTVTALNNKAKELIEATKSE
PNIARDLIAKALYYQKVATYLQTNKAKLVSDKTFDPTYLNALANDKKYSL
GNITYEGKEFSNVIIGSNPNDYASALAKDSNSKKEVTEKDKVNDISKDDL
NSKINDYFKNITDNENENAGDNIFVNKDDLPKLNTDTELTFDKTFDLTTP
KNYSSWDDYIKEKLQKRFTIYDISQNQDQNQEQKKQQDNTQQNQNPIPGL
PKENEDDLNKNIASQNVPRIAPFINYKYSGFTDYNDILARTGNSAQLFSF
DNPINPRFEYRVTEISNFNLDPGYSEFIKQNPTFFDDRGNFPIKVKVEIR
DLNDPTKTATYAIGYVKNYGNSTLAREIANQIVQDTYSKFYTALGMKPDQ
LNFTNVGNAEIAAAAFDLMGVTTGIINEPKYNASYIDLLVRLGSGVKLEE
NEDLKTAAKRYENTSFGKAVQTLFLSAIKTSNLNNSAYWTFFSTRLESVF
AQLSFNINNSNSGSTNRDKIREFFAKNPNYSVETFDKAMQSLNSRIQYFK
GLAGNPTFDESAQYNTMMEQLTIIMEQIRNMTTILTDVLQSQAPSDQKKF
QAAYEKLNILPIESGQNNKIVLASIGSILMLISIGLFILSIFLQNFKRRK
WLSNKTNKIALTWSITSVTFIIAIALIVFAILGGI
>MS53_0443 conserved hypothetical protein
MFVLSFSILIGILLYPRQSGLIQFFEYIKDFKYDQWSFWFSLSISINGFI
AGILLIFINQYSKSRLINCNYYTCWNFLINRW
>MS53_0470 conserved hypothetical protein
MNNSKVLRFNWEKENILRVIALSTLFIFVVIFGFLFEFAMKHLSVNLLSY
EYLFNTSYTLHKGSNFYVFYTVILFGLLIIISTMKSYFLVNKNNLKFSKY
ITWYVLYNFYALALLVLFAFSLNVNSNTQANTLLRNSFVIIPLLIIDLSY
DFFSLSMQKKYFTLDLKKIILEISYLLIKIVLIVIGFYVLQVFLADKQIT
AIFINNSFINHLQRIFVVTPIYKNLIIFALIFVFALMIAHKFFANKNKIF
NSVIRNKILKHLVQNFLMLFLASIIFAFYALFKTKTKELIFKIENNNELI
IFVLVISLIILSSLSFIFLTIFLQKWFNNFDQKKYFILNLLINSFLLLIA
NLLLNFQNRLIINITCLTLVFMNYLTLLLKNKYKLNSFENLLLSFYLIAG
SAILIFSNLLYLTTNENNYYLLVWTHIFDIATVFVLASLVISLLMVISPI
IYAILTKIVNNIINKENIKKGKEHVQKASKKSN
>MS53_0649 hypothetical protein
MKKLKFKYKLILLLLSATATLSATVGVSVLAFSKVQNTKEVNRIYYQEQN
INTIGGSVVTLDNFVFNASARVKNYYANSFSNHRIYNSANSGYDSTPNYW
SKLLTFSKAPTLAELQSKDFTLMTPDGIFLNYYLGAFQISFDSFSDELNG
TLYLQVTLTSKTNPANVITKVFEASGFKKVSEDSGDLNLRNLLSFNSVNL
NFTYLDSFKNLDDFKAQYTSGAATEKLSMIQSAFNFETSTVASVDFLNSS
LVFDDNNDLKFNLRLTANVPMAIPTNLDQKVPLDNIYLDITTQSYSLLKD
YFAAKAVGDKLSFATDGLDKYTIEDIKKSFDLLGANYALLNVNNLPVEYN
LKFIEIPFLNPERNEYEFIYNLYLKSAPSQLVYTAKLSLPKTALKAEEEK
ASEPQQN
>MS53_0253 putative phase-variable hemagglutinin
MREWFATASNWAGLSDQLTKKLGAERFKNVKLTYKEVTFSTNAVKTPTVK
FTVKAKEGYTLVDSGENASATEISLVVRVLYNRDDESTIQLPTQGASASA
VPNNTTMVSDPNVLRTVNVYLNYTGPSIILDEALPTVGSQDNTSLNGTSN
VTGDFNTKFKNLLVNVVRGGHAESSLFQAVINYVNKFDPKFRAQFVTNSI
DGVTITKVQNTKELRPGTLDDLVKNDRNNVFLQQIQGDTEAVYIPVTALT
NDKWLNTVLVRIPLTKFVRPITPFTASAVMIPTTEDSQEESGENSSQADN
TEQNAENQEDGQSGGEATETQEAQGDSASQSSPQT
>MS53_0304 hypothetical protein
MNMIFIKATLYKVASEKIKGFIDYLYVFVKKSQMQELNLSFEYAITKKDQ
EVVSVLLVQRWTNKQAYEAFVTKEEFKKEFFTLKSFAKETSLVFEVTTAK
>MS53_0207 putative phase-variable hemagglutinin
MTIRNLYKEANPDTNVFATQGASSSATPNNASQANDATTIEKVNVYLNYT
GPNIELDADLPTVGGQENTSINGTSNVDGAFNTAFRGNPTKGLLFTNRYA
NPLLKSVINYVNKFDPKYRATFVTEKNGVALTSVQSGTQLRIGSLNDFLY
NNKGFLQQVNTDTKAVYFAVNGVTSQGWLNTFLIRIPLTKFVKPLSVLQA
ATDSSQNAEQTGETQGSQPEAQSQ
>MS53_0646 hypothetical protein
MNMTKTLNKKEFFKLQKYKRIEKDFNTKSSYSIWHLLFYLVVFFLNSILL
GFSLLFLLRSDFLPAIFFEIYIYSINSWLGNLVFPLCLLVYLLLMMVLLN
KLFENKALSWFSSRDVKIPWKVVSKKIVKFLFYWFFILALCDYLYFHYIV
YENSSLFFNPTLVRIQELFANGWWKYFNNSQIPLGSFLHVGVIFDSLGNA
LVVASLSWILTLFLLVFLGATSFAELIVVDLSKNNASIFKRENNLQEYKD
YLRYSSYHYSYTTSVEKYLNFLMKAAIYFKLDYIHSTVEDLEKEVFEQLK
KEKIQEIEAVKLFEFSKADEARANSLYLENQTLKDQIEKLTVENRNLRNQ
EKQLDFFDENHSAWQNNETPFATNLRLARPNQGFTQEVKVTQAVPIPKPQ
VKTQVVDTGPKPNDGIFANSKPAPVVKKAKIEEFDLDEFLKQEATQSIKL
EPEFEEVRPLFAPKPVKETKKTVEELNREALEKQEFYNWLEEKNSSKVGL
FKPRKLGDTSLGMVHESDGILRDDINPKNFQPKNQRMQTKQKGHYTYSDE
KLQKITNEIDVSDFLVDDN
>MS53_0241 putative phase-variable hemagglutinin
MQFTSGSVTAAKAVKEDAEYSKVTDTIKTTLEEKYTAAAGFLTEDSKLAN
LNADGTLATTQSDLESAKTALDAAVAAVKPELDFQKTKTSAAAKVTELES
LVNSALKAELQRQVNELTKEQAAQATTMLANLTSLKESLESLQTLVSNGL
KMQVDYPRNYYDADNKSAFDDALLKASSVFPAFQWTAQSIMVPAPEEGAL
PNPRAWTKAREKSEFKLQNFVIAPAQAAPATQSDSTAAESATVRVANGEA
TPAEGAASREAPTPAADLASTVSYLKSLSDSLKAETDKLNGDTTENKTAY
YKADTTRTLYWDGFMPKIILESFTASQTNVEDNKSKLQTWFDTKANWSNL
EDQLVKKLGSEKFKNVKLTNPQVDWDIVNSNQYRPKVTFDVTQKEGYELQ
SGSEFSQSLTMVIRVLYTTQSPNANVLQMQGASSSAAPAGSTPSNNAAVI
RNVNVYMNYTGPAIMLNADLPTVGGQENTSINGTSNVDGDFNTKFKNLLV
NVVGGSFTQTSLLQAIINYVNKFDPKFRAAFVTEKNGVALTSVQSGTQLR
IGSLNDFLYNNKGFLQQVNGDSSAVYFAVNGVTSQGWLNTFLIRIPLTKF
VKPLSVFTAPVVTPPAEEATEGSQTQASIPQTIPNSSQ
>MS53_0062 putative acyl carrier protein
MNVQETVFAHLRKLTKKEFHLDSLLSDLKLDSLDIAELIIEAEKKFKIEI
SDEMLQNLKKVSDIVNLITDLVEAE
>MS53_0243 putative phase-variable hemagglutinin
MVVNGYVADTTGDNEAAHEEANKTNQKKLEAWFTNSANWVGLEDQLTKKL
GADKFKNVTLTNPVITYEKVTVNTYTWKNPKVTFTVEAKPDYQLTEPTTN
PKQISLTIRVLYENQTSTQNLLTIQGASPSAAPSNSSVDDANVKAKVNVY
LNYTGPAIVLDQAVPAVGTANNTSLNRTSNITGDFNTKFKELLINNLMPR
EFLSTVINYVNKFDPKFRAQLVQI
>MS53_0467 conserved hypothetical protein
MIQLNLLSAKNIQTTVKATDFKVNFNLNDKWNKIENNALLSFQNVLCSLT
YNKKEYFIFFDSLLIQSNKGQINLYYNQEYFVYEQNDKNKNELKKLNQEY
SKLKKNILLKTFQINDNNNASNIANLLILKQKAYRLKAQIYFSLFACEEP
WK
>MS53_0256 putative phase-variable hemagglutinin
MRDVNVYMNYTGPAIMLNADLPTVGGQENTSINGTSNVDGDFNTKFKKLL
VRDNAQTSLLQAIINYVNKFDPKFPASFVLNTNGVALTSVQSGTQLRIGS
LNDFLWNKKGFLQQVNGDSSAVYFAVTALTNDRWLNTVLIRIPLTKFVRP
ISVLEEQSAQDQTPEASQQAGGDQSTSSSPQGTAQTQSNQGS
>MS53_0131 conserved hypothetical protein
MNKLLSFSLLSLVPIVTSSCGTSSVKNSVDSNEQASTSLSRESIASFDGL
LNYVFNNNQVAVENFKNSQDQILPAKFNEVKQALVWAPPFYVNVLEQNSE
LKKQTSDSINILKDTFKNDWYWMVKNISKFIYQFNPYGQLYDDEAAQKQD
FDLIEHLYGRLDKKINWNEIFYILSYKIQVDPDANETFKDLTAHFYFLDD
GFVKFYTYENQGKQNLFFVPDYFKIALSDDDIALVDLTANQENSNGNTTT
KNYKAISLQKEADQEKYKNIALDFENKIWEKWTQKIDSLIEEAKEFGSKT
EEEVRKENTYEKFFQYFSNVSYVGMQFKAINELNASNPKTKLFKYTLRWI
DEN
>MS53_0554 hypothetical protein
MHLDECQKYLKDLFVAKAKGANYYAVEALKEKAKDLNWKLGKSWEKWRQV
ESWIKSDEFTSSTDTSGKSKATDALAKAKKFLESGENGLTLENFETKLNS
VSSTLDLSSLKLKPEPSQKTVSQKSYDQLVSEVSKLSYLSSLEKSTYLQN
>MS53_0206 putative phase-variable hemagglutinin
MPKIVVPGYEADGAGDNKAQHETENTRLLQQWFATESNWEKLSEQLTKKL
GANKFKNVVLTAPTVSYEDGGSNTRIPKVTFTLQGKDGYTLQTDNGATSS
LTLSIRVLYTSASSTQNALRYQGASSSAAPSGSTPSNNAAVIRNVNVYMN
YIGPNIELNAELPTVGSQDNTSINGTSNVDGDFNTKFKNLLVNVVGGSFT
QTSLLQAIINYVNKFDPKYRAAFVTEKNGVALTSVQSGTQLRIGSLNDFL
YNNKGFLQQVNGDSSAVYFAVTAVTNDKWLNTVLVRIPLTKFVRPISVLE
EQSAQDQTPEASQQAGGDQSTSSSPQGTAQTQSNQGS
>MS53_0212 putative phase-variable hemagglutinin
MDDLVVKNKNNVFLQQIQGDTEAVYLPVTAIANNRWLNTVLVRIPLTKFV
RPLTEFQAQREAAPTEEASGDQAQADPQATQMGTQARS
>MS53_0267 putative phase-variable hemagglutinin
MNWDGFMPKIVLDNFDSGWTQNTANQDKIKAWFREASNWAGLSDQLIKKL
GADKFKNVVLSNPQIIFEYVRLLTSESVKFPKVTFRVAAKDGYQLASGEG
TSTTLELKIRVLYSSSNPKRSFTSISRSFIFSSAR
>MS53_0205 putative phase-variable hemagglutinin
MASTVSYLKTLETELKTQLEALNGDTTANKTAYYKPVEGRTLYWDGFMPK
IVVPTYEPDTTGDSKATHQTTNQQKLQQWFATESNWEKLSEQLTKKLGSS
KFKNVVLTSPMVSYEDTSSNTRVPKVTFTLQGKEGYELQTTDGASATLSL
SIRVLYTSESSTQNVLRYQGASSSAAPSGSTPSNNAAVIRDVNVYMNYTG
PALILNAALPTVGNAANTSLNETSNVTDEDFNAAFRGLLFTDRYVNPLMQ
SVINYVNKFDPKYKAAFVTEKNGVALTSVQSGTQLRIGSLNDFLYNNKGF
LQQVNTDTKAVYFAVNGVTSQGWLNTFLIRIPLTKFVKPLSVLQAATDSS
QNAEQTGETQGSQPEAQSQ
>MS53_0224 putative phase-variable hemagglutinin
MLYWDGFMPRIVIERFDTTWTENTRNRNDLVAWFQNTANWSQVSEQLTKK
LGVEKLRNVNLVYKNITWVNSPAGAQHKIPTVTFTVEARDGYTLADDSTR
ELSLVVRNLYNSSAVDATTLFPYQGASSSAVPSGSSVDDANVKANVNVYL
NYTGSSIVLYEALPTVGGKENTSLNGTSNITDDFNNKFNKLLIRYKAETS
LLQAIINYVNKFDPKFRAQFVTKTNGVALTSVQNGTQLKIGSLNDFLWNN
KGFLQQVNGDSSAAYFAVNGVTSQGWLNTFLIRIPLNKFVKAIL
>MS53_0589 hypothetical protein
MMASVQIIKKNKTQYVRIVESYWDKEVKKPKIREVKFLGKLEDFTKDNPN
FIEELKESVSSKKNKKQKDRNEQILQIMNSLKLDKFKGTQIKGYGNLVYE
EIMNYLELPSFLTDLQKKNSRSKYDLASITKYWF
>MS53_0369 hypothetical protein
MCFQKIFWRKRRKIFRKNIPNIAVRLILNYAVCVIQKLQNEKINVKFTNE
NKLLISRKILEKINNIAYNLEKNKYNQVTSSIIRKLKMNLYWALKVDISV
LFQLLFLR
>MS53_0235 putative phase-variable hemagglutinin
MPKIVVQGYQADGYVADGQGNNRAAHEDANKTKLQNWFNAPANWEKLSEQ
LTKKLGADKFKNVTLSSPTVTYETISTGRDVRIPKVTFTVTAKNGYNLTA
PTGNTKQISLSIRVLYTSASSTENALRYQGVSFSATPKDASVENPATAIK
NVNVYLNYTGPSIVLDQAVPAVGTANNTSLNGTSNVDGDFNTKFKKLLVR
VLNGGHAESSLFQAVINYVNKFDPKFRAQFVTNSINGVTITKVESGTQLR
PGTLDDLVKNDRNNVFLQQMKNDTEAVYLPVTALTSDKWLNTVLVRIPLT
KFVKPLTEFQAQSATAPTQEGQTTQGQENSAGSGALGSTTGTQTPSGGSS
QASGS
>MS53_0566 hypothetical protein
MKMATKVTAFCNTCTLKWEYFFGETQELSMINLALNYIEQNQKNLFVKEN
FFEFINKSFSGKKDFESMPQETKNKSMELFYNQFVGMFSDEERTMLESNI
LLKHNLEIYPIYLSSLPEDERKVMNIPLLSLWFLNQEEYKRRYNPEIIYI
QFTKEQDYLVCPKCQSMSAAVIAQDQV
>MS53_0232 putative phase-variable hemagglutinin
MTAAAGFLTEDLKLANLDVDGTLATTQASLESAKTALDAAVAAVKPDLDF
QKTKTSAAAKVTELDALVNTAFKAELQRQVNELTKDHAAQATTMLENLTS
LKDSLTSLQDLVSKGLAMQVDYPQKYYDADNKEAFDAALLEASSVFPAFK
WTAQSIIVETPEGQLPNPRAWTAPRAKTEFVLQNFVMASAPAQAAPATQS
DSDAAPAASATVRLATGTEEAAEDSESSETQTPAPTPAADLASTVSYLKS
LNDTLKAATDALNGDNPTTKTAYYKADAGRTLYWDGFMPKITLESFTASQ
TNVEDNKSKLQTWFNTKANWSNLEDQLVKKLGSEKFKNVKLTNPQVDWDI
VNSNQYRPKVTFDVTQKEGYELQSGSEFSQSLTMVIRVLYTTQSPNANVL
QMQGASSSAAPNNTRNANDETTKRTVNVYLNYTGPSIVLDEAHPTVGATP
NTSINGTSNVTGDFNTKFKNLLVNVVGGEFHSNSIITNNN
>MS53_0252 putative phase-variable hemagglutinin
MASTASYLKSLSDSLKAETDKLNGDTTENKTAYYKADTTRTLYWDGFMPK
IVVEGYVADTTGSSKDTNETANKTKLEAWFTNSANWAGLEDQLTKKLGSD
KFKNVTLTNPVVTYEEITVNSNTWKNPKVTFNIQAKPGYQLTEPATNPKQ
ISLTIRVLYSSQESNQNLLTIKGASSSAAPRRATVNDPNVKLKVNVYLNY
TGPSIVLDADLPQVGTATNTSLNGTSNVEGTFNTAFRGKPSSGLLFTNRY
ANPLLKSVINYVNKFKPKYRATFVTDSRDGVTISNVTNNVQLRPGTLDDL
VKNKNKVFLQQIQGDTEAVYFAVTAIASNNWLNTFLIRIPLTKFVKSLTA
FTTIPASAPTQTDSGTGAQTQPETQS
>MS53_0069 conserved hypothetical protein
MRVKFNLLRFIMNKVKKKKLIILFGFSSAILTSAAGISFGVTQLSQAYNS
NQQIIAINRSRSFNLITAKAIKNSTEFNTDLNLEELKEEDKVPIQEIEEV
PKPIEEVKKEEPPKVVAPKVELPQSENPPLLSSAGSIVDLNSIKPTVSEK
SDWNKPTGQRLSAALQQQAREAIGKAQKAFNDVFSKLKVNTDGTAEFTKA
QKEELADSLGVPADKKEWFFKMFLKNFEEGNQITDMYGMLRRDSSTAKTN
REMFLHAINNVDFDFYFSINNIPYIKWEYGNDITIGGKPPSDAENVVVQH
QINLNKKRFLSSDSKWRRYSPQMIADNDYFGWTQTDITSEVTSRVTLPST
DGIKISKYVANSDNAVATDKTTPRYALTLDASNTRGYSDVIRNLQTLNAA
GYKIEVFNVKRIGHQKNQDFSAVFRAMPDTIKLLNLFFDDTNTDSLVGLK
GKRIESLGLWTTKNQLDENWGIDPFLLKDVEEIEFDYQNSQSGDYPRGAE
VAGSIIFSRLRFDKSDTLPEIQKGLNVALIEKADQRAFQGYFGAGSWPSE
LDFTNHPNIKTLQGLKFGPKNDLVFKKLYLYNNSFNFNLTADQLSKSGFH
HLLFRTEPSKHAEIHFSNETRVNQYQLYISGDASQMTGKWIPEFQGLLYA
GQKTFIKTIYVDNQEMVNRLNDSGVPSLYGFSVVVKPAGYTGNESSADLD
FSS
>MS53_0547 conserved hypothetical protein
MKKLKKLFLFSLAPITASVAAFSLSATVASNTSESELSSLKFLSNSDKDV
YRKLIDQAQSDNDKKSILNEAKSVNTELLALSQITSEASLLTANVSNLIK
TISESKVSSKYADLLSALYLINNANSAYNSIKGNKTTYNASNIARFTVEQ
TSFLSNLLELSNFELFETLQSDNASLNDSVAFLNTFKNKILLEHKFYANM
LLGIATGQKAVFDLSIAVLKDQFPNLKENLEKTTYFIDSKKQLNSNADVE
NRLKVYDSLNVEDNGILNSINFNTSMAILNNKTLFDQAVRSSNSQNRYFL
IITAVLLVSLVGFAIFINAKKRKMMQKREQETLQQLKADAQNLNKETSEE
TFLDETEVLPEEKAEKSLKTKSEEKSDKTTEKKKNKARKS
>MS53_0204 putative phase-variable hemagglutinin
MSDQLTKKLGAERFKNVKLTFKEASFSGDDIKTPTVKFTVAAKEGYTLTT
GDNASATEISLVVRVLYNRGSENVIQLPTQGASASAVPSNSSVNDAKVKA
KVNVYLNYTGPSIVLDETHPTVGATPNTSLNGTSNVTDDFNNKFNKLLIR
YKAETSLFKAVINYVNKFDPKFRAQFVTNAIDGVTITKVQNTRELRPGTL
DDLVVKNKNNVFLQQIQGDTEAVYLPVTAVTNDKWLNTVLVRIPLTKFVR
PISVLEAPQQEETQEDGEEMQQGNEDGTQAGQTDETAGSGTPQASTPQTM
PNSSQ
>MS53_0344 hypothetical protein
MKREIKSKYFISVFLTYLICYALALGFFLLINEFSLKQKNSLIDVFTTVS
VIFTAVLLLILIFRFGFLKNLFTFFKKNHENTKKLRQEYKSKKLSYEEKQ
AYKYLNQQKETKKAAKKPKVKTSNFPFVFIALLSLIITIIVAIISFNL
>MS53_0218 putative phase-variable hemagglutinin
MTKVQNTRELKPGTLDDLKGNNVFLQQVNGNSSAVYFAVNGVTSQGWLNT
FLIRIPLTKFVRPLTEFQAQSPAAPTEEASGDQAQADPQATQMGTQAQSQ
>MS53_0065 hypothetical protein
MQEIHMKNATKSDENKKLRTECNAFVKQVFLTYEAWNNQLKKQLLNLKFK
ESYLKDKNLSQEVHKLEIKIKASGSMIQSILSVMKPENSWIIEKCFLDKN
TRNNSLWYKDYFSKSTFYKRKNLAVKEFAQIYFDF