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2024-04-28 13:52:24

Gene list

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COG category: Unclassified
Organism: Rhizobium etli, CFN42

Number of genes found: 142

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli, CFN42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_PD00052 hypothetical proteinsymbiotic plasmid p42d CDS59726 2844 + 0.608298
NA RHE_PD00049 hypothetical conserved proteinsymbiotic plasmid p42d CDS54644 543 - 0.620626
NA RHE_PD00009 hypothetical proteinsymbiotic plasmid p42d CDS10210 1071 + 0.535014
NA RHE_PD00159 hypothetical conserved proteinsymbiotic plasmid p42d CDS176485 348 - 0.531609
NA RHE_PD00162 hypothetical conserved proteinsymbiotic plasmid p42d CDS178350 306 - 0.584967
NA RHE_PD00027 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS31697 426 - 0.591549
NA RHE_PD00168 conjugal transfer protein Dsymbiotic plasmid p42d CDS181977 240 - 0.633333
NA RHE_PD00141 hypothetical conserved proteinsymbiotic plasmid p42d CDS160891 450 - 0.546667
NA RHE_PD00019 hypothetical proteinsymbiotic plasmid p42d CDS22963 891 + 0.634119
NA RHE_PD00182 hypothetical proteinsymbiotic plasmid p42d CDS200373 369 + 0.607046
NA RHE_PD00197 iron-molybdenum cofactor processing proteinsymbiotic plasmid p42d CDS213384 495 - 0.543434
NA RHE_PD00175 hypothetical conserved proteinsymbiotic plasmid p42d CDS191545 1407 + 0.565743
NA RHE_PD00221 nitrogen fixation proteinsymbiotic plasmid p42d CDS236261 951 + 0.562566
NA RHE_PD00142 hypothetical conserved proteinsymbiotic plasmid p42d CDS161361 537 + 0.595903
NA RHE_PD00161 hypothetical conserved proteinsymbiotic plasmid p42d CDS177292 465 + 0.591398
NA RHE_PD00119 hypothetical conserved proteinsymbiotic plasmid p42d CDS135331 399 + 0.536341
NA RHE_PD00239 hypothetical proteinsymbiotic plasmid p42d CDS256318 408 + 0.57598
NA RHE_PD00073 hypothetical proteinsymbiotic plasmid p42d CDS82688 390 - 0.582051
NA RHE_PD00313 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS329443 267 + 0.531835
NA RHE_PD00310 acyltransferase nodulation protein Asymbiotic plasmid p42d CDS326742 588 - 0.556122
NA RHE_PD00080 hypothetical proteinsymbiotic plasmid p42d CDS92219 336 - 0.607143
NA RHE_PD00154 hypothetical conserved proteinsymbiotic plasmid p42d CDS171539 546 - 0.57326
NA RHE_PD00284 hypothetical proteinsymbiotic plasmid p42d CDS300914 342 - 0.599415
NA RHE_PD00303 hypothetical conserved proteinsymbiotic plasmid p42d CDS319180 204 - 0.54902
NA RHE_PD00327 hypothetical conserved proteinsymbiotic plasmid p42d CDS341918 198 + 0.631313
NA RHE_PD00013 hypothetical conserved proteinsymbiotic plasmid p42d CDS18203 453 + 0.584989
NA RHE_PD00068 hypothetical proteinsymbiotic plasmid p42d CDS76971 384 + 0.559896
NA RHE_PD00062 pectate lyase secreted proteinsymbiotic plasmid p42d CDS70657 915 - 0.589071
NA RHE_PD00264 hypothetical proteinsymbiotic plasmid p42d CDS284542 540 - 0.592593
NA RHE_PD00219 hypothetical proteinsymbiotic plasmid p42d CDS235615 303 - 0.531353
NA RHE_PD00331 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS345848 732 + 0.612022
NA RHE_PD00140 hypothetical proteinsymbiotic plasmid p42d CDS160299 321 + 0.588785
NA RHE_PD00326 hypothetical proteinsymbiotic plasmid p42d CDS340810 543 + 0.449355
NA RHE_PD00223 nitrogenase stabilizing/protective proteinsymbiotic plasmid p42d CDS238744 384 + 0.575521
NA RHE_PD00147 transport secretion system IV, VirB5 proteinsymbiotic plasmid p42d CDS165565 702 + 0.606838
NA RHE_PD00336 hypothetical proteinsymbiotic plasmid p42d CDS351779 369 - 0.588076
NA RHE_PD00092 hypothetical proteinsymbiotic plasmid p42d CDS104556 543 + 0.558011
NA RHE_PD00189 hypothetical conserved proteinsymbiotic plasmid p42d CDS206381 738 + 0.578591
NA RHE_PD00299 hypothetical proteinsymbiotic plasmid p42d CDS314574 492 + 0.593496
NA RHE_PD00048 hypothetical conserved proteinsymbiotic plasmid p42d CDS53909 441 + 0.60771
NA RHE_PD00263 hypothetical proteinsymbiotic plasmid p42d CDS283945 453 + 0.578366
NA RHE_PD00002 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS616 960 - 0.613542
NA RHE_PD00169 conjugal transfer protein Csymbiotic plasmid p42d CDS182206 288 - 0.604167
NA RHE_PD00069 hypothetical conserved proteinsymbiotic plasmid p42d CDS77912 573 + 0.568935
NA RHE_PD00183 hypothetical proteinsymbiotic plasmid p42d CDS201136 552 + 0.586957
NA RHE_PD00047 hypothetical proteinsymbiotic plasmid p42d CDS53247 450 - 0.564444
NA RHE_PD00258 polysaccharide inhibition proteinsymbiotic plasmid p42d CDS278647 597 + 0.530988
NA RHE_PD00172 hypothetical conserved proteinsymbiotic plasmid p42d CDS188064 1014 - 0.545365
NA RHE_PD00194 hypothetical proteinsymbiotic plasmid p42d CDS212084 456 - 0.552632
NA RHE_PD00155 putative excisonase proteinsymbiotic plasmid p42d CDS172105 627 - 0.578947
NA RHE_PD00144 transport secretion system IV, VirB2 proteinsymbiotic plasmid p42d CDS162566 300 + 0.593333
NA RHE_PD00085 hypothetical proteinsymbiotic plasmid p42d CDS96152 384 + 0.502604
NA RHE_PD00014 hypothetical conserved proteinsymbiotic plasmid p42d CDS18892 1095 + 0.59726
NA RHE_PD00190 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS207125 1422 - 0.601969
NA RHE_PD00337 hypothetical proteinsymbiotic plasmid p42d CDS352338 306 + 0.617647
NA RHE_PD00335 hypothetical conserved proteinsymbiotic plasmid p42d CDS351222 486 - 0.532922
NA RHE_PD00312 hypothetical proteinsymbiotic plasmid p42d CDS328267 915 + 0.537705
NA RHE_PD00050 hypothetical conserved proteinsymbiotic plasmid p42d CDS55202 435 - 0.606897
NA RHE_PD00187 hypothetical conserved proteinsymbiotic plasmid p42d CDS203867 417 - 0.589928
NA RHE_PD00286 hypothetical proteinsymbiotic plasmid p42d CDS302890 282 + 0.64539
NA RHE_PD00317 hypothetical proteinsymbiotic plasmid p42d CDS333992 348 - 0.58046
NA RHE_PD00044 hypothetical conserved proteinsymbiotic plasmid p42d CDS50036 372 - 0.569892
NA RHE_PD00125 hypothetical proteinsymbiotic plasmid p42d CDS140601 627 - 0.470494
NA RHE_PD00042 hypothetical proteinsymbiotic plasmid p42d CDS46561 384 - 0.552083
NA RHE_PD00055 hypothetical proteinsymbiotic plasmid p42d CDS64487 630 + 0.677778
NA RHE_PD00213 hypothetical conserved proteinsymbiotic plasmid p42d CDS228439 591 - 0.566836
NA RHE_PD00097 hypothetical proteinsymbiotic plasmid p42d CDS109481 321 + 0.501558
NA RHE_PD00166 hypothetical conserved proteinsymbiotic plasmid p42d CDS179789 270 + 0.577778
NA RHE_PD00210 hypothetical conserved proteinsymbiotic plasmid p42d CDS227253 336 - 0.517857
NA RHE_PD00340 hypothetical conserved proteinsymbiotic plasmid p42d CDS356905 597 + 0.546064
NA RHE_PD00076 monophenol monooxygenase proteinsymbiotic plasmid p42d CDS84667 1830 + 0.58306
NA RHE_PD00247 hypothetical conserved proteinsymbiotic plasmid p42d CDS265693 1554 - 0.66731
NA RHE_PD00032 hypothetical conserved proteinsymbiotic plasmid p42d CDS34932 468 + 0.525641
NA RHE_PD00022 hypothetical conserved proteinsymbiotic plasmid p42d CDS26242 648 + 0.594136
NA RHE_PD00243 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS260640 408 - 0.583333
NA RHE_PD00231 nitrogen fixation proteinsymbiotic plasmid p42d CDS246813 318 + 0.569182
NA RHE_PD00051 hypothetical proteinsymbiotic plasmid p42d CDS56896 2610 + 0.619157
NA RHE_PD00283 hypothetical proteinsymbiotic plasmid p42d CDS300251 336 + 0.5
NA RHE_PD00001 hypothetical proteinsymbiotic plasmid p42d CDS86 384 - 0.596354
NA RHE_PD00241 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS259610 624 - 0.642628
NA RHE_PD00065 hypothetical proteinsymbiotic plasmid p42d CDS75038 549 + 0.644809
NA RHE_PD00149 transport secretion system IV, VirB7 proteinsymbiotic plasmid p42d CDS167473 282 + 0.620567
NA RHE_PD00012 hypothetical conserved proteinsymbiotic plasmid p42d CDS17399 675 + 0.567407
NA RHE_PD00242 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS260293 324 - 0.635802
NA RHE_PD00029 putative carbon-monoxide dehydrogenase proteinsymbiotic plasmid p42d CDS33350 369 - 0.569106
NA RHE_PD00064 hypothetical proteinsymbiotic plasmid p42d CDS73569 969 - 0.649123
NA RHE_PD00325 hypothetical conserved proteinsymbiotic plasmid p42d CDS339760 792 - 0.513889
NA RHE_PD00034 hypothetical conserved proteinsymbiotic plasmid p42d CDS37258 393 - 0.600509
NA RHE_PD00291 cation pump membrane (nitrogen fixation)proteinsymbiotic plasmid p42d CDS306974 486 - 0.604938
NA RHE_PD00354 plasmid replication protein RepCdsymbiotic plasmid p42d CDS370046 1209 + 0.56493
NA RHE_PD00294 cytochrome C oxidase, fixQ chain proteinsymbiotic plasmid p42d CDS310260 153 - 0.568627
NA RHE_PD00185 hypothetical conserved proteinsymbiotic plasmid p42d CDS202081 537 + 0.595903
NA RHE_PD00163 hypothetical proteinsymbiotic plasmid p42d CDS178723 432 - 0.615741
NA RHE_PD00145 transport secretion system IV, VirB3 proteinsymbiotic plasmid p42d CDS162871 339 + 0.578171
NA RHE_PD00007 hypothetical conserved proteinsymbiotic plasmid p42d CDS7045 2472 + 0.582524
NA RHE_PD00348 hypothetical proteinsymbiotic plasmid p42d CDS363202 999 + 0.541542
NA RHE_PD00160 hypothetical proteinsymbiotic plasmid p42d CDS176816 519 + 0.585742
NA RHE_PD00070 hypothetical conserved proteinsymbiotic plasmid p42d CDS78554 750 - 0.552
NA RHE_PD00066 hypothetical proteinsymbiotic plasmid p42d CDS75596 414 + 0.635266
NA RHE_PD00011 hypothetical proteinsymbiotic plasmid p42d CDS16578 423 - 0.56974
NA RHE_PD00026 hypothetical proteinsymbiotic plasmid p42d CDS31002 513 + 0.60039
NA RHE_PD00259 nitrogen fixation proteinsymbiotic plasmid p42d CDS279761 711 + 0.558369
NA RHE_PD00156 hypothetical conserved proteinsymbiotic plasmid p42d CDS173058 1191 - 0.594458
NA RHE_PD00265 hypothetical conserved proteinsymbiotic plasmid p42d CDS285210 729 - 0.563786
NA RHE_PD00079 hypothetical conserved proteinsymbiotic plasmid p42d CDS89657 2391 + 0.563363
NA RHE_PD00287 hypothetical proteinsymbiotic plasmid p42d CDS303001 645 - 0.592248
NA RHE_PD00257 polysaccharide repressor proteinsymbiotic plasmid p42d CDS277387 372 - 0.534946
NA RHE_PD00266 hypothetical conserved proteinsymbiotic plasmid p42d CDS286060 417 + 0.563549
NA RHE_PD00311 hypothetical proteinsymbiotic plasmid p42d CDS327627 420 - 0.557143
NA RHE_PD00056 nodulation proteinsymbiotic plasmid p42d CDS65113 564 + 0.632979
NA RHE_PD00246 hypothetical conserved proteinsymbiotic plasmid p42d CDS264794 903 - 0.638981
NA RHE_PD00184 putative insertion sequence ATP-binding proteinsymbiotic plasmid p42d CDS201482 459 + 0.590414
NA RHE_PD00171 hypothetical conserved proteinsymbiotic plasmid p42d CDS187430 471 - 0.58811
NA RHE_PD00165 hypothetical proteinsymbiotic plasmid p42d CDS179475 402 + 0.559702
NA RHE_PD00041 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS45207 1029 + 0.613217
NA RHE_PD00123 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS138565 354 + 0.576271
NA RHE_PD00139 conjugal transfer antirestriction proteinsymbiotic plasmid p42d CDS159233 879 + 0.617747
NA RHE_PD00018 hypothetical proteinsymbiotic plasmid p42d CDS22501 420 + 0.616667
NA RHE_PD00033 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS36823 357 + 0.647059
NA RHE_PD00186 hypothetical conserved proteinsymbiotic plasmid p42d CDS203066 456 + 0.537281
NA RHE_PD00010 hypothetical proteinsymbiotic plasmid p42d CDS12063 4416 - 0.593297
NA RHE_PD00198 nitrogenase, NifN proteinsymbiotic plasmid p42d CDS213875 1356 - 0.59882
NA RHE_PD00164 hypothetical proteinsymbiotic plasmid p42d CDS179158 321 + 0.538941
NA RHE_PD00072 hypothetical conserved proteinsymbiotic plasmid p42d CDS80677 1134 - 0.567019
NA RHE_PD00143 transport secretion system IV, VirB1 proteinsymbiotic plasmid p42d CDS161901 669 + 0.61136
NA RHE_PD00053 hypothetical proteinsymbiotic plasmid p42d CDS63181 477 + 0.633124
NA RHE_PD00238 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS256115 285 - 0.621053
NA RHE_PD00093 putative insertion sequence transposase proteinsymbiotic plasmid p42d CDS105291 492 - 0.589431
NA RHE_PD00267 hypothetical proteinsymbiotic plasmid p42d CDS286871 252 + 0.595238
NA RHE_PD00304 hypothetical conserved proteinsymbiotic plasmid p42d CDS319408 489 - 0.570552
NA RHE_PD00017 hypothetical conserved proteinsymbiotic plasmid p42d CDS22049 456 + 0.585526
NA RHE_PD00077 hypothetical proteinsymbiotic plasmid p42d CDS86528 456 + 0.557018
NA RHE_PD00285 fucosyl transferase proteinsymbiotic plasmid p42d CDS301719 987 + 0.550152
NA RHE_PD00343 hypothetical proteinsymbiotic plasmid p42d CDS359751 465 + 0.554839
NA RHE_PD00274 nodulation proteinsymbiotic plasmid p42d CDS292583 333 + 0.540541
NA RHE_PD00195 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS212449 495 - 0.616162
NA RHE_PD00272 hypothetical conserved proteinsymbiotic plasmid p42d CDS290726 312 - 0.541667
NA RHE_PD00301 bacteroid protein Ssymbiotic plasmid p42d CDS317536 456 - 0.541667
NA RHE_PD00232 hypothetical conserved proteinsymbiotic plasmid p42d CDS247378 939 + 0.57295
NA RHE_PD00122 hypothetical conserved proteinsymbiotic plasmid p42d CDS138182 387 + 0.612403
NA RHE_PD00211 hypothetical proteinsymbiotic plasmid p42d CDS227638 408 + 0.526961
NA RHE_PD00046 probable insertion sequence transposase proteinsymbiotic plasmid p42d CDS51441 1476 - 0.600949