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2024-05-10 11:48:41

Gene list

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COG category: Unclassified
Organism: Escherichia coli, JEF100

Number of genes found: 59

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli, JEF100
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pCoo023 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS20406 294 - 0.527211
NA pCoo091 immunity protein for colicin IbSubName: Full=Colicin Ib immunity protein; SubName: Full=Immunity protein for colicin Ib; pCoo CDS71953 384 - 0.356771
NA pCoo004 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2662 195 + 0.497436
NA pCoo024 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS20779 258 + 0.468992
NA pCoo022 IS element transposaseSubName: Full=IS element transposase; SubName: Full=Uncharacterized protein; pCoo CDS18228 1572 + 0.571883
NA pCoo003 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2396 270 + 0.518519
NA pCoo099 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS78052 375 + 0.530667
NA pCoo087 hypothetical secreted proteinSubName: Full=Hypothetical secreted protein; pCoo CDS68667 369 + 0.409214
NA pCoo129 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS97615 264 - 0.5
NA pCoo038 prophage protein gp49SubName: Full=Prophage protein gp49; pCoo CDS29673 312 + 0.455128
NA pCoo048 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS36215 531 - 0.608286
NA pCoo019 IS100 transposaseSubName: Full=IS100 transposase; SubName: Full=Putative IS100 transposase; pCoo CDS16196 1023 - 0.528837
NA pCoo073 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS57339 315 + 0.568254
NA pCoo093 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS72820 507 - 0.64497
NA pCoo049 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS36745 258 - 0.5
NA pCoo092 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS72494 309 + 0.533981
NA pCoo096 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS75579 453 + 0.562914
NA pCoo025 putative integral membrane proteinSubName: Full=Putative integral membrane protein; pCoo CDS21332 261 + 0.356322
NA pCoo078 putative IS100 transposaseSubName: Full=IS100 transposase; SubName: Full=Putative IS100 transposase; pCoo CDS59315 1023 - 0.528837
NA pCoo069 putative IS element proteinSubName: Full=ECs1338; SubName: Full=Hypothetical 12.8 kDa protein y4hO; SubName: Full=IS66 family transposase orf2; SubName: Full=Putative IS element protein; SubName: Full=TnpA; SubName: Full=Transposase; SubName: Full=Transposase 5; SubName: Full=Uncharacterized protein; pCoo CDS55359 351 - 0.524217
NA pCoo005 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2884 699 + 0.439199
NA pCoo063 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS49291 468 + 0.412393
NA pCoo033 TraK-X deletion and fusion proteinSubName: Full=TraK-X deletion and fusion protein; pCoo CDS25775 597 + 0.547739
NA pCoo034 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS26615 366 + 0.530055
NA conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS80409 270 + 0.622222
ccdB pCoo051 cytotoxic protein CcdBSubName: Full=Cytotoxic protein CcdB; SubName: Full=Cytotoxic protein CcdB (LetB protein) (Protein G); SubName: Full=Plasmid toxin addiction system protein CcdB; SubName: Full=Post-segregation toxin; SubName: Full=Toxin protein; pCoo CDS37667 306 + 0.529412
cooA pCoo013 CS1 fimbrial subunit A precursorSubName: Full=CS1 fimbrial subunit A; SubName: Full=CfaA; SubName: Full=CooA; pCoo CDS9280 516 + 0.45155
cooB pCoo009 CS1 fimbrial subunit B precursorSubName: Full=CS1 fimbrial subunit B; SubName: Full=CfaB; SubName: Full=CooB; pCoo CDS6261 717 + 0.368201
cooC pCoo014 CooC precursor (Usher protein)SubName: Full=CooC; SubName: Full=CooC (Usher protein); Flags: Precursor; pCoo CDS9877 2619 + 0.383734
cooD pCoo015 CooD precursorSubName: Full=CfaD; SubName: Full=CooD; Flags: Precursor; pCoo CDS12492 1092 + 0.386447
eatA pCoo056 secreted autotransporter serine protease EatASubName: Full=Secreted autotransporter serine protease EatA; pCoo CDS42072 4095 - 0.406838
hok pCoo075 post-segregation killing proteinSubName: Full=Hok/gef cell toxic protein; SubName: Full=Post segregation killing protein; SubName: Full=Post-segregation killing protein; SubName: Full=Stable plasmid inheritance protein Hok; pCoo CDS57861 162 + 0.518519
insA pCoo061 insertion element IS1 protein InsASubName: Full=Insertion element IS1 protein InsA; pCoo CDS48447 276 + 0.518116
mok pCoo074 modulator of hok proteinSubName: Full=Modulator of hok protein; pCoo CDS57803 216 + 0.50463
parB pCoo065 partition protein ParBSubName: Full=Partition protein ParB; pCoo CDS51130 423 + 0.439716
pilI pCoo123 PilI proteinSubName: Full=PilI; SubName: Full=PilI protein; SubName: Full=Uncharacterized protein; pCoo CDS94395 255 - 0.580392
pilJ pCoo122 PilJ proteinSubName: Full=PilJ; SubName: Full=PilJ protein; pCoo CDS93900 453 - 0.350993
pilK pCoo121 PilK proteinSubName: Full=IncI1 conjugal transfer protein PilK; SubName: Full=PilK; SubName: Full=PilK protein; pCoo CDS93260 591 - 0.370558
pilL pCoo120 lipoprotein (PilL protein)SubName: Full=IncI1 conjugal transfer protein PilL; SubName: Full=Lipoprotein (PilL protein); SubName: Full=PilL; pCoo CDS92159 1068 - 0.500936
pilM pCoo119 PilM proteinSubName: Full=IncI1 conjugal transfer protein PilM; SubName: Full=PilM; SubName: Full=PilM protein; SubName: Full=PilM, type IV pilus biogenesis protein; pCoo CDS91722 438 - 0.486301
pilO pCoo117 PilO proteinSubName: Full=IncI1 conjugal transfer protein PilO; SubName: Full=PilO; SubName: Full=PilO protein; pCoo CDS88738 1296 - 0.487654
pilP pCoo116 PilP proteinSubName: Full=IncI1 conjugal transfer pilus biogenesis protein PilP; SubName: Full=PilP; SubName: Full=PilP protein; pCoo CDS88299 453 - 0.439294
pilS pCoo113 type IV prepilinSubName: Full=IncI1 conjugal transfer pilus protein PilS; SubName: Full=PilS; SubName: Full=PilS, typeIV prepilin; SubName: Full=Type IV prepilin; SubName: Full=TypeIV prepilin; pCoo CDS84993 615 - 0.437398
pilT pCoo112 putative transglycosylase PilTSubName: Full=IncI1 conjugal transfer transglycosylase protein PilT; SubName: Full=PilT; SubName: Full=Putative transglycosylase PilT; pCoo CDS84423 561 - 0.434938
pilV pCoo110 typeIV prepilin (truncated)SubName: Full=TypeIV prepilin (Truncated); pCoo CDS83024 759 - 0.480896
repA pCoo002 replication initiation proteinSubName: Full=Replication initiation protein; pCoo CDS456 1032 + 0.555233
repA1 pCoo036 replication initiation protein RepASubName: Full=FII replication protein; SubName: Full=Replication initiation protein RepA; pCoo CDS27845 858 + 0.562937
repA2 pCoo035 replication regulatory protein RepA2SubName: Full=Replication regulatory protein; SubName: Full=Replication regulatory protein RepA2; pCoo CDS27285 258 + 0.484496
repA6 pCoo035a positive regulator of repfic repa1 expression (repa1 leader peptide)SubName: Full=Positive regulator of repfic repa1 expression (Repa1 leader peptide); pCoo CDS27778 75 + 0.466667
repY pCoo001 RepY proteinSubName: Full=RepY protein; pCoo CDS379 90 + 0.488889
stbB pCoo101 plasmid stability protein StbBSubName: Full=Plasmid stability protein StbB; SubName: Full=StbB; pCoo CDS79643 393 + 0.501272
traA pCoo030 fimbrial protein precursorSubName: Full=Fimbrial protein; pCoo CDS24536 360 + 0.525
traB pCoo127 TraB proteinSubName: Full=IncI1 conjugal transfer protein TraC; SubName: Full=TraB; SubName: Full=TraB protein; pCoo CDS96435 534 - 0.432584
traC pCoo126 TraC proteinSubName: Full=IncI1 conjugal transfer protein TraC; SubName: Full=TraC; SubName: Full=TraC protein; pCoo CDS95497 684 - 0.504386
traD pCoo125 TraD proteinSubName: Full=TraD; SubName: Full=TraD protein; pCoo CDS94917 567 - 0.430335
traE pCoo032 TraE proteinSubName: Full=F-pilus assembly protein; SubName: Full=TraE protein; pCoo CDS25222 564 + 0.47695
traJ pCoo029 TraJ proteinSubName: Full=TraJ protein; pCoo CDS23775 282 + 0.37234
traL pCoo031 TraL proteinSubName: Full=TraL protein; pCoo CDS24897 306 + 0.473856
traM pCoo028 TraM proteinSubName: Full=TraM protein; pCoo CDS22910 387 + 0.395349