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2024-04-27 21:24:05

Gene list

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COG category: Unclassified
Organism: Escherichia coli, JEF100

Number of genes found: 59

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli, JEF100
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pCoo033 TraK-X deletion and fusion proteinpCoo CDS25775 597 + 0.547739
NA pCoo005 hypothetical proteinpCoo CDS2884 699 + 0.439199
NA pCoo049 conserved hypothetical proteinpCoo CDS36745 258 - 0.5
NA pCoo004 conserved hypothetical proteinpCoo CDS2662 195 + 0.497436
NA pCoo063 hypothetical proteinpCoo CDS49291 468 + 0.412393
NA pCoo078 putative IS100 transposasepCoo CDS59315 1023 - 0.528837
NA pCoo092 conserved hypothetical proteinpCoo CDS72494 309 + 0.533981
NA conserved hypothetical proteinpCoo CDS80409 270 + 0.622222
NA pCoo099 conserved hypothetical proteinpCoo CDS78052 375 + 0.530667
NA pCoo023 hypothetical proteinpCoo CDS20406 294 - 0.527211
NA pCoo087 hypothetical secreted proteinpCoo CDS68667 369 + 0.409214
NA pCoo034 hypothetical proteinpCoo CDS26615 366 + 0.530055
NA pCoo025 putative integral membrane proteinpCoo CDS21332 261 + 0.356322
NA pCoo129 hypothetical proteinpCoo CDS97615 264 - 0.5
NA pCoo024 conserved hypothetical proteinpCoo CDS20779 258 + 0.468992
NA pCoo073 conserved hypothetical proteinpCoo CDS57339 315 + 0.568254
NA pCoo069 putative IS element proteinpCoo CDS55359 351 - 0.524217
NA pCoo091 immunity protein for colicin IbpCoo CDS71953 384 - 0.356771
NA pCoo048 conserved hypothetical proteinpCoo CDS36215 531 - 0.608286
NA pCoo096 conserved hypothetical proteinpCoo CDS75579 453 + 0.562914
NA pCoo022 IS element transposasepCoo CDS18228 1572 + 0.571883
NA pCoo093 conserved hypothetical proteinpCoo CDS72820 507 - 0.64497
NA pCoo038 prophage protein gp49pCoo CDS29673 312 + 0.455128
NA pCoo019 IS100 transposasepCoo CDS16196 1023 - 0.528837
NA pCoo003 conserved hypothetical proteinpCoo CDS2396 270 + 0.518519
ccdB pCoo051 cytotoxic protein CcdBpCoo CDS37667 306 + 0.529412
cooA pCoo013 CS1 fimbrial subunit A precursorpCoo CDS9280 516 + 0.45155
cooB pCoo009 CS1 fimbrial subunit B precursorpCoo CDS6261 717 + 0.368201
cooC pCoo014 CooC precursor (Usher protein)pCoo CDS9877 2619 + 0.383734
cooD pCoo015 CooD precursorpCoo CDS12492 1092 + 0.386447
eatA pCoo056 secreted autotransporter serine protease EatApCoo CDS42072 4095 - 0.406838
hok pCoo075 post-segregation killing proteinpCoo CDS57861 162 + 0.518519
insA pCoo061 insertion element IS1 protein InsApCoo CDS48447 276 + 0.518116
mok pCoo074 modulator of hok proteinpCoo CDS57803 216 + 0.50463
parB pCoo065 partition protein ParBpCoo CDS51130 423 + 0.439716
pilI pCoo123 PilI proteinpCoo CDS94395 255 - 0.580392
pilJ pCoo122 PilJ proteinpCoo CDS93900 453 - 0.350993
pilK pCoo121 PilK proteinpCoo CDS93260 591 - 0.370558
pilL pCoo120 lipoprotein (PilL protein)pCoo CDS92159 1068 - 0.500936
pilM pCoo119 PilM proteinpCoo CDS91722 438 - 0.486301
pilO pCoo117 PilO proteinpCoo CDS88738 1296 - 0.487654
pilP pCoo116 PilP proteinpCoo CDS88299 453 - 0.439294
pilS pCoo113 type IV prepilinpCoo CDS84993 615 - 0.437398
pilT pCoo112 putative transglycosylase PilTpCoo CDS84423 561 - 0.434938
pilV pCoo110 typeIV prepilin (truncated)pCoo CDS83024 759 - 0.480896
repA pCoo002 replication initiation proteinpCoo CDS456 1032 + 0.555233
repA1 pCoo036 replication initiation protein RepApCoo CDS27845 858 + 0.562937
repA2 pCoo035 replication regulatory protein RepA2pCoo CDS27285 258 + 0.484496
repA6 pCoo035a positive regulator of repfic repa1 expression (repa1 leader peptide)pCoo CDS27778 75 + 0.466667
repY pCoo001 RepY proteinpCoo CDS379 90 + 0.488889
stbB pCoo101 plasmid stability protein StbBpCoo CDS79643 393 + 0.501272
traA pCoo030 fimbrial protein precursorpCoo CDS24536 360 + 0.525
traB pCoo127 TraB proteinpCoo CDS96435 534 - 0.432584
traC pCoo126 TraC proteinpCoo CDS95497 684 - 0.504386
traD pCoo125 TraD proteinpCoo CDS94917 567 - 0.430335
traE pCoo032 TraE proteinpCoo CDS25222 564 + 0.47695
traJ pCoo029 TraJ proteinpCoo CDS23775 282 + 0.37234
traL pCoo031 TraL proteinpCoo CDS24897 306 + 0.473856
traM pCoo028 TraM proteinpCoo CDS22910 387 + 0.395349