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2024-05-04 02:14:29

Gene list

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COG category: Unclassified
Organism: Lactobacillus salivarius subsp. salivarius UCC118, UCC118

Number of genes found: 152

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus salivarius subsp. salivarius UCC118, UCC118
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSL_1831 Hypothetical proteinpMP118 CDS122787 402 - 0.283582
NA LSL_1841 Hypothetical proteinpMP118 CDS136348 162 - 0.320988
NA hypothetical proteinpSF118-44 CDS20332 405 + 0.333333
NA LSL_1836 Conserved hypothetical proteinpMP118 CDS132056 666 - 0.315315
NA hypothetical proteinpSF118-20 CDS17419 177 + 0.418079
NA LSL_1884 Hypothetical proteinpMP118 CDS177913 273 - 0.322344
NA hypothetical proteinpSF118-44 CDS8152 204 + 0.343137
NA LSL_1863 Hypothetical membrane associated proteinpMP118 CDS153299 231 - 0.337662
NA hypothetical proteinpSF118-20 CDS10872 561 + 0.358289
NA LSL_1829 Putative type II restriction enzymepMP118 CDS119255 1179 - 0.290076
NA hypothetical proteinpSF118-44 CDS14823 180 + 0.438889
NA LSL_1857 Hypothetical membrane associated proteinpMP118 CDS146942 408 - 0.348039
NA hypothetical proteinpSF118-44 CDS16666 681 + 0.28928
NA LSL_1895 Hypothetical membrane spanning proteinpMP118 CDS188605 177 - 0.316384
NA LSL_1754 L-rhamnose isomerasepMP118 CDS20438 1266 + 0.351501
NA hypothetical proteinpSF118-20 CDS16455 312 + 0.36859
NA LSL_1815 Hypothetical proteinpMP118 CDS99265 315 - 0.304762
NA LSL_1816 Ser-Asp rich hypothetical proteinpMP118 CDS99693 2313 - 0.340683
NA LSL_1951 PTS system, mannose-specific IIAB componentpMP118 CDS234005 477 - 0.301887
NA DinJ damage inducible protein-like proteinpSF118-44 CDS39222 171 - 0.339181
NA LSL_1925 Hypothetical proteinpMP118 CDS209512 354 - 0.370057
NA LSL_1825 Hypothetical proteinpMP118 CDS113442 1164 - 0.303265
NA LSL_1832 Hypothetical proteinpMP118 CDS123188 222 - 0.288288
NA conserved hypothetical proteinpSF118-20 CDS2628 279 + 0.37276
NA LSL_1926 Hypothetical membrane associated proteinpMP118 CDS209874 270 - 0.244444
NA LSL_1921 Nonfunctional salvaricin B precursorpMP118 CDS207404 174 - 0.252874
NA LSL_1849 Hypothetical proteinpMP118 CDS143083 297 - 0.282828
NA LSL_1907 Hypothetical proteinpMP118 CDS198695 525 - 0.350476
NA LSL_1889 PTS system, glucitol/sorbitol-specific IIA componentpMP118 CDS182084 381 - 0.314961
NA LSL_1758d Hypothetical proteinpMP118 CDS29230 252 + 0.301587
NA hypothetical proteinpSF118-44 CDS4156 504 + 0.293651
NA LSL_1808 Hypothetical proteinpMP118 CDS91485 516 + 0.313953
NA hypothetical proteinpSF118-20 CDS3837 192 - 0.432292
NA hypothetical proteinpSF118-20 CDS9714 630 + 0.501587
NA LSL_1840 Hypothetical proteinpMP118 CDS136215 141 - 0.312057
NA conserved hypothetical proteinpSF118-20 CDS2399 213 + 0.314554
NA LSL_1773 Hypothetical proteinpMP118 CDS55468 954 + 0.29979
NA conserved hypothetical proteinpSF118-20 CDS3038 750 - 0.402667
NA LSL_1810 Hypothetical secreted proteinpMP118 CDS93925 654 - 0.295107
NA hypothetical proteinpSF118-44 CDS41568 249 - 0.37751
NA LSL_1761 Hypothetical proteinpMP118 CDS41703 339 + 0.283186
NA LSL_1851 Hypothetical proteinpMP118 CDS144031 681 - 0.299559
NA LSL_1820 Hypothetical proteinpMP118 CDS107894 288 - 0.295139
NA LSL_1850 Hypothetical proteinpMP118 CDS143412 513 - 0.274854
NA hypothetical proteinpSF118-44 CDS3226 918 + 0.362745
NA LSL_1920 Bacteriocin-like prepeptidepMP118 CDS207128 153 - 0.326797
NA LSL_1785 Hypothetical proteinpMP118 CDS69114 168 - 0.339286
NA LSL_1811 Hypothetical secreted proteinpMP118 CDS94591 555 - 0.273874
NA hypothetical proteinpSF118-44 CDS22472 126 + 0.253968
NA LSL_1765 Hypothetical proteinpMP118 CDS47582 1251 + 0.326139
NA LSL_1799 Hypothetical proteinpMP118 CDS83949 234 + 0.239316
NA LSL_1744 Hypothetical proteinpMP118 CDS8298 333 + 0.3003
NA LSL_1812 Hypothetical secreted proteinpMP118 CDS95157 1281 - 0.394223
NA LSL_1858 Hypothetical proteinpMP118 CDS149960 147 - 0.278912
NA LSL_1845 Hypothetical protein with HTH motifpMP118 CDS140263 423 - 0.307329
NA LSL_1800 Hypothetical proteinpMP118 CDS84228 225 + 0.306667
NA hypothetical proteinpSF118-20 CDS16759 453 + 0.370861
NA LSL_1903 Fructose-1,6-bisphosphatasepMP118 CDS195235 1971 - 0.313039
NA conserved hypothetical proteinpSF118-20 CDS11444 186 + 0.344086
NA hypothetical proteinpSF118-20 CDS12477 141 + 0.404255
NA hypothetical proteinpSF118-44 CDS38271 837 - 0.475508
NA LSL_1848 Hypothetical proteinpMP118 CDS142260 315 - 0.295238
NA LSL_1846 Hypothetical proteinpMP118 CDS140682 483 - 0.285714
NA LSL_1929 Conserved hypothetical membrane proteinpMP118 CDS212426 501 - 0.343313
NA LSL_1897 Hypothetical proteinpMP118 CDS189328 204 - 0.338235
NA LSL_1899 Hypothetical proteinpMP118 CDS190296 141 - 0.326241
NA LSL_1842 Hypothetical proteinpMP118 CDS136611 375 - 0.272
NA LSL_1918 Bacteriocin-like prepeptidepMP118 CDS206462 258 - 0.325581
NA LSL_1911 Hypothetical membrane spanning proteinpMP118 CDS203118 270 - 0.274074
NA LSL_1869 Hypothetical proteinpMP118 CDS159101 390 + 0.317949
NA LSL_1950 PTS system, mannose-specific IIC componentpMP118 CDS233223 765 - 0.364706
NA hypothetical proteinpSF118-44 CDS39582 288 + 0.263889
NA hypothetical proteinpSF118-44 CDS10677 747 + 0.382865
NA LSL_1905 Hypothetical proteinpMP118 CDS197465 822 + 0.279805
NA LSL_1798 Hypothetical proteinpMP118 CDS83642 258 + 0.29845
NA LSL_1819 Hypothetical membrane spanning proteinpMP118 CDS107481 339 - 0.40708
NA LSL_1959 Hypothetical proteinpMP118 CDS241215 405 - 0.293827
NA hypothetical proteinpSF118-44 CDS23166 228 - 0.324561
NA LSL_1763 Hypothetical proteinpMP118 CDS44135 564 + 0.379433
NA LSL_1908 Hypothetical proteinpMP118 CDS199292 231 - 0.307359
NA LSL_1823 Hypothetical proteinpMP118 CDS110462 711 - 0.295359
NA LSL_1864 Hypothetical proteinpMP118 CDS153777 246 - 0.373984
NA putative truncated transposasepSF118-44 CDS4773 228 + 0.394737
NA hypothetical proteinpSF118-44 CDS10429 198 + 0.414141
NA LSL_1809 Hypothetical proteinpMP118 CDS93534 282 - 0.336879
NA hypothetical proteinpSF118-20 CDS13518 573 - 0.30192
NA hypothetical proteinpSF118-44 CDS22721 453 - 0.368653
NA hypothetical proteinpSF118-44 CDS40441 834 - 0.321343
NA putative nickasepSF118-20 CDS67 2061 - 0.39738
NA hypothetical proteinpSF118-44 CDS5876 300 + 0.34
NA LSL_1883 Hypothetical membrane spanning proteinpMP118 CDS176562 1158 - 0.303972
NA putative membrane associated transport subunitpSF118-44 CDS28418 603 + 0.419569
NA hypothetical proteinpSF118-44 CDS31791 159 + 0.421384
NA LSL_1949 PTS system, mannose-specific IID componentpMP118 CDS232393 831 - 0.318893
NA LSL_1906 Hypothetical proteinpMP118 CDS198322 267 + 0.250936
NA LSL_1860 Hypothetical proteinpMP118 CDS150296 159 - 0.289308
NA conserved hypothetical proteinpSF118-20 CDS17833 258 - 0.379845
NA LSL_1740 Hypothetical replication proteinpMP118 CDS1051 993 + 0.296073
NA LSL_1898 Hypothetical proteinpMP118 CDS189521 657 - 0.322679
NA LSL_1923 Hypothetical proteinpMP118 CDS208111 126 - 0.261905
NA LSL_1870 Hypothetical proteinpMP118 CDS160095 303 + 0.287129
NA LSL_1892 Sorbitol operon activatorpMP118 CDS184097 498 - 0.301205
NA hypothetical proteinpSF118-44 CDS41977 738 - 0.355014
NA LSL_1828 Hypothetical proteinpMP118 CDS118842 249 - 0.317269
NA LSL_1852 Hypothetical proteinpMP118 CDS144823 216 - 0.277778
NA LSL_1776 Hypothetical proteinpMP118 CDS62267 255 + 0.364706
NA LSL_1862 Hypothetical proteinpMP118 CDS151191 423 + 0.260047
NA LSL_1919 Hypothetical membrane associated proteinpMP118 CDS206824 162 + 0.308642
NA LSL_1822 Hypothetical proteinpMP118 CDS110024 420 - 0.280952
NA LSL_1777 Hypothetical proteinpMP118 CDS62535 168 + 0.327381
NA LSL_1832c Hypothetical proteinpMP118 CDS126189 813 + 0.357934
NA putative stress-like proteinpSF118-20 CDS12214 252 + 0.468254
NA LSL_1866 Hypothetical proteinpMP118 CDS154628 2679 - 0.37738
NA LSL_1837 Hypothetical membrane spanning proteinpMP118 CDS132849 360 - 0.297222
NA LSL_1847 Hypothetical proteinpMP118 CDS141177 357 - 0.254902
NA LSL_1757 Hypothetical proteinpMP118 CDS25066 885 + 0.305085
NA hypothetical proteinpSF118-44 CDS41276 291 - 0.443299
NA putative truncated transposasepSF118-44 CDS2363 156 + 0.416667
NA LSL_1853 Hypothetical proteinpMP118 CDS145031 201 - 0.333333
NA LSL_1885 Hypothetical proteinpMP118 CDS178566 201 - 0.393035
NA LSL_1766 Hypothetical proteinpMP118 CDS48966 117 + 0.393162
NA LSL_1943 Conserved hypothetical proteinpMP118 CDS225956 117 - 0.307692
NA LSL_1775 Hypothetical proteinpMP118 CDS62003 204 + 0.338235
NA LSL_1922 Hypothetical membrane spanning proteinpMP118 CDS207809 264 + 0.257576
NA LSL_1814 Conserved hypothetical proteinpMP118 CDS98594 666 - 0.292793
NA LSL_1891 PTS system, glucitol/sorbitol-specific IIC2 componentpMP118 CDS183543 543 - 0.348066
NA hypothetical proteinpSF118-44 CDS38072 324 + 0.521605
NA LSL_1867 Hypothetical membrane associated proteinpMP118 CDS157427 300 + 0.216667
NA putative nickasepSF118-44 CDS12326 2061 + 0.400776
NA hypothetical proteinpSF118-20 CDS12815 216 + 0.384259
NA LSL_1856 Hypothetical proteinpMP118 CDS146776 216 - 0.296296
NA LSL_1859 Hypothetical proteinpMP118 CDS150202 153 + 0.320261
NA hypothetical proteinpSF118-20 CDS5871 252 - 0.365079
NA LSL_1742 Hypothetical proteinpMP118 CDS6118 336 + 0.3125
NA LSL_1756 Hypothetical membrane associated proteinpMP118 CDS22914 1716 - 0.327506
NA LSL_1844 Hypothetical proteinpMP118 CDS137590 384 - 0.283854
NA LSL_1770 Conserved hypothetical proteinpMP118 CDS53287 510 - 0.305882
NA putative UV-resistance-like proteinpSF118-20 CDS16058 261 + 0.425287
NA LSL_2159 Hypothetical proteinpMP118 CDS152335 771 - 0.316472
NA LSL_1861 Putative phage-related DNA binding proteinpMP118 CDS150785 201 - 0.223881
NA hypothetical proteinpSF118-44 CDS11546 279 - 0.362007
NA LSL_1827 Hypothetical proteinpMP118 CDS118441 402 - 0.30597
NA LSL_1865 Hypothetical proteinpMP118 CDS154275 249 - 0.35743
NA LSL_1890 PTS system, glucitol/sorbitol-specific IIBC componentpMP118 CDS182501 1026 - 0.37232
NA hypothetical proteinpSF118-44 CDS11847 210 - 0.304762
abp118a LSL_1917 Abp118 bacteriocin alpha peptidepMP118 CDS206262 195 - 0.441026
abp118b LSL_1916 Abp118 bacteriocin beta peptidepMP118 CDS206038 207 - 0.429952
abpIM LSL_1915 AbpIM bacteriocin immunity proteinpMP118 CDS205728 168 - 0.285714
abpIP LSL_1914 AbpIP induction peptidepMP118 CDS205492 117 - 0.333333
repA putative plasmid replication initiation proteinpSF118-44 CDS9165 1095 + 0.382648
repA putative replication initiation proteinpSF118-20 CDS4179 1104 - 0.394928
traG LSL_1817 Conjugation-related ATPasepMP118 CDS102007 2865 - 0.32356