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2024-05-05 19:43:57

Gene list

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COG category: Unclassified
Organism: Shigella flexneri

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
S0005 orf, hypotheticalvirulence plasmid pWR501 CDS3272 255 + 0.423529
S0006 orf, hypotheticalvirulence plasmid pWR501 CDS3470 972 - 0.311728
S0007 orf, hypotheticalvirulence plasmid pWR501 CDS4344 399 - 0.323308
S0008 ISEc8 orf, fragmentvirulence plasmid pWR501 CDS5261 552 - 0.548913
S0011 orf, hypotheticalvirulence plasmid pWR501 CDS6793 318 + 0.493711
S0016 orf, hypotheticalvirulence plasmid pWR501 CDS11084 579 - 0.314335
S0019 IS91 orfB, fragmentvirulence plasmid pWR501 CDS12630 402 - 0.529851
S0020 IS91 orfA, fragmentvirulence plasmid pWR501 CDS12986 186 - 0.532258
S0024 putative IS orf, fragmentvirulence plasmid pWR501 CDS15419 102 + 0.480392
S0025 putative IS orf, fragmentvirulence plasmid pWR501 CDS15785 1308 + 0.557339
S0026 IS3 orf, fragmentvirulence plasmid pWR501 CDS17073 213 + 0.450704
S0027 putative transposase, fragmentvirulence plasmid pWR501 CDS17742 159 + 0.339623
S0029 IS630 orf, fragmentvirulence plasmid pWR501 CDS18143 141 + 0.460993
S0030 putative enterotoxin, fragmentvirulence plasmid pWR501 CDS18654 678 + 0.355457
S0031 orf, hypotheticalvirulence plasmid pWR501 CDS19813 225 - 0.515556
S0034 IS10 orfvirulence plasmid pWR501 CDS23576 1224 - 0.441176
S0038 orf, hypotheticalvirulence plasmid pWR501 CDS26258 315 + 0.51746
S0047 IS1294 orfvirulence plasmid pWR501 CDS33711 1200 + 0.574167
S0064 IS1294 orfvirulence plasmid pWR501 CDS45727 1209 + 0.574855
S0065 orf, hypotheticalvirulence plasmid pWR501 CDS47005 231 + 0.493506
S0066 orf, hypotheticalvirulence plasmid pWR501 CDS47384 1455 - 0.325773
S0072 putative IS orf, fragmentvirulence plasmid pWR501 CDS50873 597 + 0.520938
S0076 IS1294 orf, fragmentvirulence plasmid pWR501 CDS56779 189 + 0.566138
S0077 IS1294 transposasevirulence plasmid pWR501 CDS56977 1200 + 0.576667
S0081 orf, hypotheticalvirulence plasmid pWR501 CDS60363 252 - 0.43254
S0095 IS1294 orf, fragmentvirulence plasmid pWR501 CDS70736 1209 - 0.574855
S0098 orf, hypotheticalvirulence plasmid pWR501 CDS74627 1413 - 0.318471
S0100 orf, hypotheticalvirulence plasmid pWR501 CDS76803 390 - 0.487179
S0104 orf, hypotheticalvirulence plasmid pWR501 CDS78794 429 - 0.328671
S0110 orf, hypotheticalvirulence plasmid pWR501 CDS82769 333 + 0.441441
S0112 orf, hypotheticalvirulence plasmid pWR501 CDS83747 336 - 0.39881
S0113 orf, hypotheticalvirulence plasmid pWR501 CDS84240 153 - 0.555556
S0114 orf, hypotheticalvirulence plasmid pWR501 CDS84392 144 - 0.527778
S0115 orf, hypotheticalvirulence plasmid pWR501 CDS84663 252 - 0.559524
S0116 putative IS orfvirulence plasmid pWR501 CDS85352 1053 - 0.531814
S0119 putative IS orfvirulence plasmid pWR501 CDS87292 675 - 0.503704
S0120 putative IS orfvirulence plasmid pWR501 CDS87914 285 - 0.477193
S0121 orf, hypotheticalvirulence plasmid pWR501 CDS88260 180 + 0.377778
S0122 orf, hypotheticalvirulence plasmid pWR501 CDS88540 1455 + 0.312027
S0127 putative transposasevirulence plasmid pWR501 CDS92306 951 + 0.578339
S0141 orf, hypotheticalvirulence plasmid pWR501 CDS109057 357 - 0.327731
S0173 IS1294 orfvirulence plasmid pWR501 CDS132275 1200 + 0.575
S0175 orf, hypotheticalvirulence plasmid pWR501 CDS133951 309 - 0.527508
S0176 orf, hypotheticalvirulence plasmid pWR501 CDS134313 417 - 0.489209
S0177 orf, hypotheticalvirulence plasmid pWR501 CDS135269 777 - 0.30888
S0178 putative transposasevirulence plasmid pWR501 CDS136569 339 - 0.516224
S0179 orf, hypotheticalvirulence plasmid pWR501 CDS137201 171 - 0.561404
S0184 IS91 transposase, fragmentvirulence plasmid pWR501 CDS139195 402 - 0.527363
S0185 IS91 orfAvirulence plasmid pWR501 CDS139551 423 - 0.470449
S0194 orf, hypotheticalvirulence plasmid pWR501 CDS147755 198 + 0.474747
S0199 orf, hypotheticalvirulence plasmid pWR501 CDS151687 468 - 0.459402
S0216 putative IS orfvirulence plasmid pWR501 CDS162149 1053 - 0.531814
S0225 orf, hypotheticalvirulence plasmid pWR501 CDS167600 639 - 0.366197
S0227 IS1-cat orfvirulence plasmid pWR501 CDS168768 168 + 0.470238
S0241 putative iso-IS1 orfvirulence plasmid pWR501 CDS175854 213 - 0.507042
S0242 putative IS orfvirulence plasmid pWR501 CDS176168 243 + 0.547325
S0247 putative IS orfvirulence plasmid pWR501 CDS179101 258 - 0.542636
S0269 Tn501 orf, hypotheicalvirulence plasmid pWR501 CDS199311 687 - 0.609898
S0271 Tn501 orf, hypotheticalvirulence plasmid pWR501 CDS201742 351 - 0.698006
S0275 IS600 orfA, fragmentvirulence plasmid pWR501 CDS207011 180 - 0.466667
S0281 IS1294 orfvirulence plasmid pWR501 CDS211134 1197 - 0.578112
S0282 orf, hypotheticalvirulence plasmid pWR501 CDS212340 189 - 0.566138
S0290 orf, hypotheticalvirulence plasmid pWR501 CDS218378 585 - 0.338462
S0291 orf, hypotheticalvirulence plasmid pWR501 CDS218946 219 - 0.429224
ShET2-1 enterotoxinvirulence plasmid pWR501 CDS72600 1698 - 0.357479
ccdB post-segregation toxinvirulence plasmid pWR501 CDS171306 333 + 0.507508
finO fertility inhibition proteinvirulence plasmid pWR501 CDS196205 612 + 0.562092
hmo putative regulatorvirulence plasmid pWR501 CDS207525 210 + 0.371429
icsB invasion proteinvirulence plasmid pWR501 CDS107589 1485 - 0.339394
insA IS1 repressorvirulence plasmid pWR501 CDS49281 228 + 0.52193
insA IS1 repressorvirulence plasmid pWR501 CDS38504 228 + 0.52193
insB IS1 transposase, fragmentvirulence plasmid pWR501 CDS49427 459 + 0.551198
insB IS1-insB, fragmentvirulence plasmid pWR501 CDS215299 276 - 0.449275
insB iso-IS1 orfBvirulence plasmid pWR501 CDS168385 186 - 0.494624
ipaA invasion proteinvirulence plasmid pWR501 CDS100203 1902 - 0.351209
ipaC invasion proteinvirulence plasmid pWR501 CDS103162 1149 - 0.386423
ipaD invasion proteinvirulence plasmid pWR501 CDS102113 999 - 0.357357
ipaH1.4 invasion plasmid antigenvirulence plasmid pWR501 CDS212859 1749 - 0.456261
ipaH2.5 invasion plasmid antigen Hvirulence plasmid pWR501 CDS40946 1692 + 0.458629
ipaH9.8 invasion plasmid antigenvirulence plasmid pWR501 CDS172001 1668 + 0.483213
ipaJ invasion plasmid antigenvirulence plasmid pWR501 CDS97092 780 + 0.378205
ipgA invasion plasmid antigenvirulence plasmid pWR501 CDS107187 390 - 0.302564
ipgB invasion proteinvirulence plasmid pWR501 CDS106545 627 - 0.341308
ipgD secreted proteinvirulence plasmid pWR501 CDS109387 1617 + 0.357452
ipgE invasion-associated proteinvirulence plasmid pWR501 CDS111013 363 + 0.349862
mkaD mouse killing factorvirulence plasmid pWR501 CDS9333 720 - 0.379167
mob9 plasmid mobilization proteinvirulence plasmid pWR501 CDS175055 180 - 0.472222
mxiC invasion proteinvirulence plasmid pWR501 CDS118694 1068 + 0.335206
mxiE putative lipoproteinvirulence plasmid pWR501 CDS115771 456 + 0.313596
mxiH Type III secretion proteinvirulence plasmid pWR501 CDS112965 252 + 0.337302
mxiI Type III secretion proteinvirulence plasmid pWR501 CDS113229 294 + 0.35034
mxiK Type III secretion proteinvirulence plasmid pWR501 CDS114211 567 + 0.342152
mxiL putative membrane proteinvirulence plasmid pWR501 CDS114719 696 + 0.320402
mxiM putative membrane proteinvirulence plasmid pWR501 CDS115407 408 + 0.303922
repA1 replication proteinvirulence plasmid pWR501 CDS209142 870 + 0.578161
repA2 replication proteinvirulence plasmid pWR501 CDS208603 261 + 0.417625
repA6 positive regulator for repA1 expressionvirulence plasmid pWR501 CDS209087 75 + 0.493333
sepA secreted proteasevirulence plasmid pWR501 CDS52283 4095 - 0.487179
shET2-2 enterotoxinvirulence plasmid pWR501 CDS7192 1719 - 0.331006
sopA VirG-specific proteasevirulence plasmid pWR501 CDS220500 981 + 0.376147
spa-orf10 orf, hypotheticalvirulence plasmid pWR501 CDS128463 243 + 0.312757
spa-orf11 orf, hypotheticalvirulence plasmid pWR501 CDS128822 270 + 0.32963
spa13 invasion proteinvirulence plasmid pWR501 CDS123625 351 + 0.336182
spa15 invasion proteinvirulence plasmid pWR501 CDS121847 402 + 0.333333
spa9 Type III secretion proteinvirulence plasmid pWR501 CDS126385 261 + 0.344828
stbB plasmid stable inheritance proteinvirulence plasmid pWR501 CDS155850 396 - 0.386364
tnpA Tn501 transposition transposasevirulence plasmid pWR501 CDS204068 2967 + 0.6606
tnpC IS629 orf, fragmentvirulence plasmid pWR501 CDS221449 168 - 0.422619
tnpD IS629 orfvirulence plasmid pWR501 CDS68767 357 - 0.551821
tnpD IS629 orfvirulence plasmid pWR501 CDS148301 318 + 0.537736
tnpD IS629 orf, fragmentvirulence plasmid pWR501 CDS43015 249 + 0.550201
tnpD IS629 orfvirulence plasmid pWR501 CDS32365 357 - 0.54902
tnpDE IS629 orfvirulence plasmid pWR501 CDS50234 252 + 0.547619
tnpE IS629 orf, fragmentvirulence plasmid pWR501 CDS141907 219 - 0.52968
tnpE IS629 orf, fragmentvirulence plasmid pWR501 CDS72191 255 + 0.552941
traD DNA transport protein, fragmentvirulence plasmid pWR501 CDS189271 186 + 0.543011
traX F pilin acetylation proteinvirulence plasmid pWR501 CDS195296 906 + 0.575055
trcA putative chaperonevirulence plasmid pWR501 CDS20430 576 + 0.324653
virG invasion proteinvirulence plasmid pWR501 CDS144035 3309 + 0.410396
yacA orf, hypotheticalvirulence plasmid pWR501 CDS173855 291 + 0.505155
yacB orf, hypotheticalvirulence plasmid pWR501 CDS174219 150 + 0.52
yccB orf, hypothetical, fragmentvirulence plasmid pWR501 CDS158288 258 + 0.565891
yccB orf, hypothetical, fragmentvirulence plasmid pWR501 CDS157575 768 + 0.529948
yceA orf, hypotheticalvirulence plasmid pWR501 CDS159601 222 + 0.531532
yceB orf, hypothetical, fragmentvirulence plasmid pWR501 CDS159834 186 + 0.569892
yceB orf, hypothetical, fragmentvirulence plasmid pWR501 CDS160053 216 + 0.574074
ycfA orf, hypotheticalvirulence plasmid pWR501 CDS160313 771 + 0.607004
yigA orf, hypotheticalvirulence plasmid pWR501 CDS196947 213 + 0.615023