Gene list
Applied filters:
COG category: Unclassified
Organism: Agrobacterium rhizogenes, MAFF03-01724
Number of genes found: 76
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Agrobacterium rhizogenes, MAFF03-01724 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
orf91 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 110371 | 606 | + | 0.635314 | |
orf92 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 110989 | 402 | + | 0.609453 | |
riorf1 | SubName: Full=Riorf1 protein; | pRi1724 | CDS | 869 | 672 | - | 0.613095 | ||
riorf100 | SubName: Full=Riorf100 protein; | pRi1724 | CDS | 123450 | 930 | + | 0.608602 | ||
riorf102 | SubName: Full=Riorf102 protein; SubName: Full=Riorf104 protein; | pRi1724 | CDS | 125650 | 315 | + | 0.64127 | ||
riorf103 | SubName: Full=Riorf103 protein; | pRi1724 | CDS | 126095 | 267 | + | 0.561798 | ||
riorf104 | SubName: Full=Riorf102 protein; SubName: Full=Riorf104 protein; | pRi1724 | CDS | 127998 | 315 | + | 0.644444 | ||
riorf105 | SubName: Full=Riorf105 protein; | pRi1724 | CDS | 129353 | 549 | - | 0.581056 | ||
riorf110 | SubName: Full=Riorf110 protein; | pRi1724 | CDS | 139398 | 216 | - | 0.625 | ||
riorf111 | SubName: Full=Riorf111 protein; | pRi1724 | CDS | 139618 | 294 | - | 0.632653 | ||
riorf114 | SubName: Full=Riorf114 protein; | pRi1724 | CDS | 144045 | 1164 | + | 0.634021 | ||
riorf115 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 145220 | 612 | + | 0.617647 | |
riorf118 | SubName: Full=Riorf118 protein; | pRi1724 | CDS | 148115 | 324 | + | 0.57716 | ||
riorf12 | SubName: Full=Riorf12 protein; | pRi1724 | CDS | 13414 | 1479 | + | 0.515213 | ||
riorf121 | SubName: Full=Riorf121 protein; | pRi1724 | CDS | 150805 | 441 | - | 0.641723 | ||
riorf123 | SubName: Full=Riorf123 protein; | pRi1724 | CDS | 152078 | 663 | - | 0.597285 | ||
riorf124 | SubName: Full=Riorf124 protein; | pRi1724 | CDS | 152761 | 1182 | - | 0.615059 | ||
riorf125 | SubName: Full=Riorf125 protein; | pRi1724 | CDS | 154020 | 117 | - | 0.615385 | ||
riorf128 | SubName: Full=Riorf128 protein; | pRi1724 | CDS | 157369 | 300 | - | 0.613333 | ||
riorf129 | SubName: Full=Riorf129 protein; | pRi1724 | CDS | 157661 | 384 | - | 0.643229 | ||
riorf13 | RecName: Full=Tryptophan 2-monooxygenase; EC=1.13.12.3; | pRi1724 | CDS | 15253 | 2286 | + | 0.508311 | ||
riorf131 | RecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; | pRi1724 | CDS | 159021 | 624 | - | 0.600962 | ||
riorf134 | SubName: Full=Riorf134 protein; | pRi1724 | CDS | 162503 | 1212 | + | 0.558581 | ||
riorf135 | SubName: Full=Riorf135 protein; | pRi1724 | CDS | 165119 | 591 | + | 0.571912 | ||
riorf137 | SubName: Full=Riorf137 protein; | pRi1724 | CDS | 169926 | 954 | + | 0.641509 | ||
riorf139 | SubName: Full=Riorf139 protein; | pRi1724 | CDS | 171578 | 351 | + | 0.547009 | ||
riorf14 | SubName: Full=Hydrolyze phytohormone glucoside; SubName: Full=Riorf14 protein; SubName: Full=RolA protein; | pRi1724 | CDS | 18339 | 282 | + | 0.535461 | ||
riorf142 | SubName: Full=Riorf142 protein; | pRi1724 | CDS | 177722 | 471 | + | 0.530786 | ||
riorf143 | SubName: Full=Rcorf111; SubName: Full=Riorf143 protein; | pRi1724 | CDS | 178351 | 390 | + | 0.561538 | ||
riorf144 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 179300 | 1269 | + | 0.570528 | |
riorf145 | SubName: Full=Riorf145 protein; | pRi1724 | CDS | 181447 | 303 | + | 0.528053 | ||
riorf146 | SubName: Full=Riorf146 protein; | pRi1724 | CDS | 181541 | 849 | + | 0.528857 | ||
riorf147 | SubName: Full=Rcorf115; SubName: Full=Riorf147 protein; | pRi1724 | CDS | 182597 | 810 | - | 0.550617 | ||
riorf15 | RecName: Full=Protein-tyrosine phosphatase RolB; Short=ROL B protein; EC=3.1.3.48; | pRi1724 | CDS | 19068 | 840 | - | 0.5 | ||
riorf153 | SubName: Full=Rcorf121; SubName: Full=Riorf153 protein; | pRi1724 | CDS | 192879 | 723 | + | 0.567082 | ||
riorf154 | SubName: Full=Rcorf122; SubName: Full=Riorf154 protein; | pRi1724 | CDS | 193601 | 366 | + | 0.606557 | ||
riorf155 | SubName: Full=Rcorf123; SubName: Full=Riorf155 protein; | pRi1724 | CDS | 193963 | 327 | + | 0.565749 | ||
riorf157 | SubName: Full=Riorf157 protein; | pRi1724 | CDS | 196675 | 669 | + | 0.550075 | ||
riorf159 | SubName: Full=Rcorf127; SubName: Full=Riorf159 protein; | pRi1724 | CDS | 198325 | 168 | + | 0.517857 | ||
riorf16 | RecName: Full=Cytokinin-beta-glucosidase; EC=3.2.1.-; AltName: Full=ROL C protein; | pRi1724 | CDS | 21016 | 543 | + | 0.54512 | ||
riorf165 | SubName: Full=Rcorf135; SubName: Full=Riorf165 protein; | pRi1724 | CDS | 204195 | 606 | - | 0.534653 | ||
riorf167 | SubName: Full=Riorf167 protein; | pRi1724 | CDS | 205753 | 447 | + | 0.534676 | ||
riorf168 | SubName: Full=Riorf168 protein; | pRi1724 | CDS | 206225 | 1347 | + | 0.571641 | ||
riorf169 | SubName: Full=Riorf169 protein; | pRi1724 | CDS | 207827 | 2601 | + | 0.562476 | ||
riorf17 | SubName: Full=Riorf17 protein; SubName: Full=RolD protein; | pRi1724 | CDS | 22254 | 597 | + | 0.484087 | ||
riorf171 | SubName: Full=Riorf171 protein; | pRi1724 | CDS | 212761 | 2325 | + | 0.564301 | ||
riorf172 | SubName: Full=Riorf172 protein; | pRi1724 | CDS | 215338 | 930 | + | 0.550538 | ||
riorf173 | SubName: Full=Riorf173 protein; | pRi1724 | CDS | 216371 | 1356 | + | 0.519174 | ||
riorf18 | SubName: Full=Plasmid pRi1724 rolA, rolB, rolC gene, partial and; SubName: Full=Riorf18 protein; | pRi1724 | CDS | 23316 | 273 | - | 0.549451 | ||
riorf19 | SubName: Full=Plasmid pRi1724 rolA, rolB, rolC gene, partial and; SubName: Full=Riorf19 protein; | pRi1724 | CDS | 24197 | 567 | + | 0.495591 | ||
riorf2 | SubName: Full=Riorf2 protein; | pRi1724 | CDS | 1627 | 519 | - | 0.603083 | ||
riorf21 | SubName: Full=Riorf21 protein; | pRi1724 | CDS | 26719 | 177 | - | 0.564972 | ||
riorf22 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 27055 | 420 | + | 0.578571 | |
riorf23 | SubName: Full=Riorf23 protein; | pRi1724 | CDS | 27477 | 546 | + | 0.556777 | ||
riorf24 | SubName: Full=Riorf24 protein; | pRi1724 | CDS | 28128 | 783 | + | 0.61175 | ||
riorf41 | SubName: Full=Riorf41 protein; | pRi1724 | CDS | 46934 | 801 | + | 0.581773 | ||
riorf43 | SubName: Full=Riorf43 protein; | pRi1724 | CDS | 49497 | 597 | + | 0.530988 | ||
riorf44 | SubName: Full=Riorf44 protein; | pRi1724 | CDS | 50237 | 204 | + | 0.5 | ||
riorf45 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 50576 | 1113 | + | 0.539982 | |
riorf46 | SubName: Full=Riorf46 protein; | pRi1724 | CDS | 51900 | 1428 | + | 0.594538 | ||
riorf47 | SubName: Full=Riorf47 protein; | pRi1724 | CDS | 53334 | 768 | - | 0.570312 | ||
riorf49 | SubName: Full=Riorf49 protein; | pRi1724 | CDS | 55509 | 1380 | + | 0.560145 | ||
riorf56 | SubName: Full=Riorf56 protein; | pRi1724 | CDS | 69337 | 375 | + | 0.64 | ||
riorf57 | SubName: Full=Riorf57 protein; | pRi1724 | CDS | 69656 | 747 | - | 0.626506 | ||
riorf58 | SubName: Full=Riorf58 protein; | pRi1724 | CDS | 70399 | 1392 | - | 0.60273 | ||
riorf59 | SubName: Full=Riorf59 protein; | pRi1724 | CDS | 72064 | 789 | - | 0.570342 | ||
riorf7 | SubName: Full=Riorf7 protein; | pRi1724 | CDS | 7434 | 987 | + | 0.628166 | ||
riorf73 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 89649 | 669 | - | 0.593423 | |
riorf8 | SubName: Full=Riorf8 protein; | pRi1724 | CDS | 8497 | 1893 | + | 0.593238 | ||
riorf87 | SubName: Full=Riorf87 protein; | pRi1724 | CDS | 106949 | 189 | + | 0.566138 | ||
riorf94 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRi1724 | CDS | 117366 | 1998 | - | 0.634635 | |
riorf95 | SubName: Full=Riorf95 protein; | pRi1724 | CDS | 119865 | 888 | + | 0.647523 | ||
riorf96 | SubName: Full=Riorf96 protein; | pRi1724 | CDS | 121101 | 465 | + | 0.630108 | ||
riorf97 | SubName: Full=Riorf97 protein; | pRi1724 | CDS | 121962 | 516 | + | 0.662791 | ||
riorf98 | SubName: Full=Riorf98 protein; | pRi1724 | CDS | 122514 | 327 | + | 0.59633 | ||
riorf99 | RecName: Full=Ribonuclease VapC; Short=RNase VapC; EC=3.1.-.-; AltName: Full=Toxin VapC; | pRi1724 | CDS | 122840 | 405 | + | 0.614815 |