TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-01 23:08:22

Gene list

Applied filters:

COG category: Unclassified
Organism: Treponema pallidum subsp. pallidum str. Nichols, Nichols

Number of genes found: 242

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0006 Tp75 proteinchromosome CDS7014 168 + 0.452381
TP0007 T. pallidum predicted coding region TP0007chromosome CDS7317 651 + 0.506912
TP0008 T. pallidum predicted coding region TP0008chromosome CDS7991 270 + 0.481481
TP0010 T. pallidum predicted coding region TP0010chromosome CDS10237 126 + 0.47619
TP0011 tpr protein B (tprB)chromosome CDS10396 1983 + 0.525466
TP0012 T. pallidum predicted coding region TP0012chromosome CDS12372 177 + 0.480226
TP0013 T. pallidum predicted coding region TP0013chromosome CDS12545 666 + 0.504505
TP0020 76K proteinchromosome CDS22046 2124 + 0.493879
TP0021 T. pallidum predicted coding region TP0021chromosome CDS25107 267 + 0.426966
TP0022 T. pallidum predicted coding region TP0022chromosome CDS25328 2169 + 0.500231
TP0031 T. pallidum predicted coding region TP0031chromosome CDS40005 279 + 0.562724
TP0039 T. pallidum predicted coding region TP0039chromosome CDS46755 159 + 0.490566
TP0041 T. pallidum predicted coding region TP0041chromosome CDS49386 123 + 0.617886
TP0059 T. pallidum predicted coding region TP0059chromosome CDS68940 228 - 0.539474
TP0064 T. pallidum predicted coding region TP0064chromosome CDS71127 576 + 0.496528
TP0066 T. pallidum predicted coding region TP0066chromosome CDS72347 315 + 0.520635
TP0069 T. pallidum predicted coding region TP0069chromosome CDS75089 531 - 0.525424
TP0070 T. pallidum predicted coding region TP0070chromosome CDS75469 387 - 0.529716
TP0084 T. pallidum predicted coding region TP0084chromosome CDS94437 234 - 0.534188
TP0086 conserved hypothetical proteinchromosome CDS95311 945 + 0.536508
TP0088 conserved hypothetical proteinchromosome CDS96781 615 - 0.486179
TP0110 T. pallidum predicted coding region TP0110chromosome CDS125181 1734 + 0.495963
TP0117 tpr protein C (tprC)chromosome CDS134901 1797 - 0.562604
TP0126 T. pallidum predicted coding region TP0126chromosome CDS147612 876 - 0.590183
TP0127 T. pallidum predicted coding region TP0127chromosome CDS148595 690 + 0.55942
TP0128 T. pallidum predicted coding region TP0128chromosome CDS149473 348 + 0.626437
TP0129 T. pallidum predicted coding region TP0129chromosome CDS149805 477 + 0.595388
TP0130 T. pallidum predicted coding region TP0130chromosome CDS150610 420 - 0.588095
TP0131 tpr protein D (tprD)chromosome CDS151101 1797 - 0.562604
TP0132 T. pallidum predicted coding region TP0132chromosome CDS152942 210 - 0.504762
TP0133 T. pallidum predicted coding region TP0133chromosome CDS153136 1233 - 0.567721
TP0134 T. pallidum predicted coding region TP0134chromosome CDS154365 1131 - 0.573828
TP0135 T. pallidum predicted coding region TP0135chromosome CDS155447 942 - 0.591295
TP0136 T. pallidum predicted coding region TP0136chromosome CDS156792 1488 + 0.609543
TP0137 T. pallidum predicted coding region TP0137chromosome CDS158258 138 + 0.536232
TP0138 T. pallidum predicted coding region TP0138chromosome CDS158533 738 - 0.490515
TP0148 T. pallidum predicted coding region TP0148chromosome CDS171135 579 - 0.512953
TP0149 T. pallidum predicted coding region TP0149chromosome CDS171707 594 - 0.501683
TP0157 conserved hypothetical proteinchromosome CDS178686 903 - 0.501661
TP0159 T. pallidum predicted coding region TP0159chromosome CDS180275 1029 - 0.515063
TP0161 T. pallidum predicted coding region TP0161chromosome CDS183275 93 - 0.55914
TP0169 T. pallidum predicted coding region TP0169chromosome CDS189990 99 + 0.555556
TP0174 T. pallidum predicted coding region TP0174chromosome CDS192784 843 - 0.442467
TP0177 T. pallidum predicted coding region TP0177chromosome CDS194302 1311 - 0.487414
TP0179 T. pallidum predicted coding region TP0179chromosome CDS196632 1884 - 0.60828
TP0180 T. pallidum predicted coding region TP0180chromosome CDS198457 159 - 0.591195
TP0183 T. pallidum predicted coding region TP0183chromosome CDS199673 846 - 0.566194
TP0214 T. pallidum predicted coding region TP0214chromosome CDS217566 198 + 0.575758
TP0224 T. pallidum predicted coding region TP0224chromosome CDS229027 105 + 0.485714
TP0225 leucine-rich repeat protein TpLRRchromosome CDS229177 741 + 0.51417
TP0226 T. pallidum predicted coding region TP0226chromosome CDS235069 687 - 0.490539
TP0232 T. pallidum predicted coding region TP0232chromosome CDS241063 117 + 0.555556
TP0248 T. pallidum predicted coding region TP0248chromosome CDS260962 405 + 0.565432
TP0249 flagellar filament outer layer protein (flaA-1)chromosome CDS261445 1053 + 0.54416
TP0250 T. pallidum predicted coding region TP0250chromosome CDS262548 228 + 0.548246
TP0258 conserved hypothetical proteinchromosome CDS269326 711 - 0.52602
TP0260 T. pallidum predicted coding region TP0260chromosome CDS270857 1347 - 0.569413
TP0263 conserved hypothetical proteinchromosome CDS274028 1785 + 0.579832
TP0266 T. pallidum predicted coding region TP0266chromosome CDS278323 126 + 0.531746
TP0273 T. pallidum predicted coding region TP0273chromosome CDS289392 792 + 0.535354
TP0278 T. pallidum predicted coding region TP0278chromosome CDS294069 129 + 0.612403
TP0280 T. pallidum predicted coding region TP0280chromosome CDS296831 129 + 0.589147
TP0281 T. pallidum predicted coding region TP0281chromosome CDS296976 129 + 0.581395
TP0284 T. pallidum predicted coding region TP0284chromosome CDS298578 660 + 0.545455
TP0286 conserved hypothetical proteinchromosome CDS300228 366 + 0.480874
TP0287 conserved hypothetical proteinchromosome CDS300560 624 + 0.456731
TP0293 T. pallidum predicted coding region TP0293chromosome CDS306819 177 + 0.553672
TP0299 T. pallidum predicted coding region TP0299chromosome CDS312159 225 + 0.644444
TP0304 T. pallidum predicted coding region TP0304chromosome CDS317926 3120 - 0.563141
TP0311 T. pallidum predicted coding region TP0311chromosome CDS326754 144 - 0.555556
TP0313 tpr protein E (tprE)chromosome CDS327985 2289 + 0.567497
TP0314 T. pallidum predicted coding region TP0314chromosome CDS330330 147 - 0.591837
TP0315 T. pallidum predicted coding region TP0315chromosome CDS330499 648 - 0.608025
TP0317 tpr protein G (tprG)chromosome CDS332393 2271 - 0.563188
TP0318 T. pallidum predicted coding region TP0318chromosome CDS334615 180 - 0.616667
TP0320 T. pallidum predicted coding region TP0320chromosome CDS335894 156 + 0.583333
TP0324 T. pallidum predicted coding region TP0324chromosome CDS339889 1458 + 0.558299
TP0325 conserved hypothetical proteinchromosome CDS341328 2967 + 0.545332
TP0332 T. pallidum predicted coding region TP0332chromosome CDS355494 126 + 0.507937
TP0338 T. pallidum predicted coding region TP0338chromosome CDS360529 489 + 0.492843
TP0346 T. pallidum predicted coding region TP0346chromosome CDS371282 702 + 0.548433
TP0347 T. pallidum predicted coding region TP0347chromosome CDS371952 831 + 0.574007
TP0355 T. pallidum predicted coding region TP0355chromosome CDS378563 384 - 0.476562
TP0359 T. pallidum predicted coding region TP0359chromosome CDS381907 636 - 0.525157
TP0360 conserved hypothetical proteinchromosome CDS382753 177 + 0.548023
TP0368 T. pallidum predicted coding region TP0368chromosome CDS392439 336 + 0.592262
TP0370 T. pallidum predicted coding region TP0370chromosome CDS394389 417 - 0.505995
TP0375 T. pallidum predicted coding region TP0375chromosome CDS400328 210 + 0.5
TP0376 T. pallidum predicted coding region TP0376chromosome CDS400853 906 - 0.533113
TP0377 conserved hypothetical proteinchromosome CDS401827 126 + 0.555556
TP0382 T. pallidum predicted coding region TP0382chromosome CDS408019 123 + 0.585366
TP0385 conserved hypothetical proteinchromosome CDS409767 375 + 0.549333
TP0404 T. pallidum predicted coding region TP0404chromosome CDS428856 534 - 0.546816
TP0409 T. pallidum predicted coding region TP0409chromosome CDS435007 186 + 0.521505
TP0412 conserved hypothetical proteinchromosome CDS438543 306 - 0.473856
TP0415 T. pallidum predicted coding region TP0415chromosome CDS442204 534 + 0.593633
TP0420 T. pallidum predicted coding region TP0420chromosome CDS447475 228 + 0.587719
TP0422 T. pallidum predicted coding region TP0422chromosome CDS449871 1026 + 0.572125
TP0425 T. pallidum predicted coding region TP0425chromosome CDS452606 261 + 0.601533
TP0432 T. pallidum predicted coding region TP0432chromosome CDS459927 552 + 0.567029
TP0433 T. pallidum predicted coding region TP0433chromosome CDS460533 771 + 0.584955
TP0437 T. pallidum predicted coding region TP0437chromosome CDS463674 531 - 0.538606
TP0443 conserved hypothetical proteinchromosome CDS469453 855 + 0.481871
TP0451 T. pallidum predicted coding region TP0451chromosome CDS478394 183 - 0.513661
TP0453 T. pallidum predicted coding region TP0453chromosome CDS482117 864 + 0.462963
TP0455 conserved hypothetical proteinchromosome CDS484016 1005 - 0.527363
TP0456 T. pallidum predicted coding region TP0456chromosome CDS485077 1317 - 0.592255
TP0457 conserved hypothetical proteinchromosome CDS486461 1782 + 0.580247
TP0462 T. pallidum predicted coding region TP0462chromosome CDS491040 843 + 0.561091
TP0463 T. pallidum predicted coding region TP0463chromosome CDS491887 333 + 0.567568
TP0465 T. pallidum predicted coding region TP0465chromosome CDS493027 873 - 0.55441
TP0466 T. pallidum predicted coding region TP0466chromosome CDS493832 1170 - 0.457265
TP0467 T. pallidum predicted coding region TP0467chromosome CDS494992 249 + 0.53012
TP0473 T. pallidum predicted coding region TP0473chromosome CDS501827 645 - 0.488372
TP0486 antigen, p83/100chromosome CDS517526 1455 - 0.603436
TP0487 T. pallidum predicted coding region TP0487chromosome CDS519069 1578 - 0.597592
TP0490 conserved hypothetical proteinchromosome CDS524824 189 + 0.550265
TP0495 T. pallidum predicted coding region TP0495chromosome CDS530646 150 - 0.546667
TP0503 T. pallidum predicted coding region TP0503chromosome CDS538368 564 + 0.539007
TP0504 T. pallidum predicted coding region TP0504chromosome CDS538913 141 + 0.602837
TP0539 T. pallidum predicted coding region TP0539chromosome CDS581186 222 + 0.513514
TP0548 T. pallidum predicted coding region TP0548chromosome CDS591679 1305 + 0.576245
TP0552 T. pallidum predicted coding region TP0552chromosome CDS598158 534 - 0.571161
TP0564 T. pallidum predicted coding region TP0564chromosome CDS611049 2037 + 0.516937
TP0573 T. pallidum predicted coding region TP0573chromosome CDS622147 93 + 0.44086
TP0574 carboxypeptidase, 47 kDachromosome CDS622266 1305 - 0.54023
TP0577 T. pallidum predicted coding region TP0577chromosome CDS626800 1845 + 0.560434
TP0579 T. pallidum predicted coding region TP0579chromosome CDS629535 777 + 0.527671
TP0583 T. pallidum predicted coding region TP0583chromosome CDS633734 126 - 0.531746
TP0587 T. pallidum predicted coding region TP0587chromosome CDS639596 231 - 0.545455
TP0590 ribosomal protein L36 (rpmJ-2)chromosome CDS640943 117 - 0.495726
TP0592 T. pallidum predicted coding region TP0592chromosome CDS642738 1503 + 0.520958
TP0593 T. pallidum predicted coding region TP0593chromosome CDS644177 2034 + 0.551131
TP0597 T. pallidum predicted coding region TP0597chromosome CDS648812 279 - 0.487455
TP0599 T. pallidum predicted coding region TP0599chromosome CDS650908 657 - 0.480974
TP0607 T. pallidum predicted coding region TP0607chromosome CDS658061 147 - 0.544218
TP0610 tpr protein H (tprH)chromosome CDS661246 2082 + 0.548031
TP0617 T. pallidum predicted coding region TP0617chromosome CDS669460 279 - 0.591398
TP0618 T. pallidum predicted coding region TP0618chromosome CDS669834 360 - 0.608333
TP0619 T. pallidum predicted coding region TP0619chromosome CDS670249 813 - 0.607626
TP0620 tpr protein I (tprI)chromosome CDS671058 1830 - 0.574317
TP0621 tpr protein J (tprJ)chromosome CDS672945 2277 - 0.564339
TP0625 T. pallidum predicted coding region TP0625chromosome CDS680252 753 + 0.492696
TP0629 T. pallidum predicted coding region TP0629chromosome CDS686965 825 + 0.563636
TP0638 T. pallidum predicted coding region TP0638chromosome CDS696869 435 - 0.554023
TP0645 T. pallidum predicted coding region TP0645chromosome CDS707060 177 - 0.553672
TP0646 conserved hypothetical proteinchromosome CDS707295 1323 - 0.499622
TP0656 T. pallidum predicted coding region TP0656chromosome CDS719609 102 + 0.558824
TP0663 outer membrane protein, putativechromosome CDS725548 729 + 0.547325
TP0664 flagellar filament outer layer protein (flaA-2)chromosome CDS726273 726 + 0.545455
TP0666 T. pallidum predicted coding region TP0666chromosome CDS727768 294 - 0.537415
TP0676 T. pallidum predicted coding region TP0676chromosome CDS741469 279 - 0.605735
TP0677 T. pallidum predicted coding region TP0677chromosome CDS741769 609 - 0.589491
TP0690 T. pallidum predicted coding region TP0690chromosome CDS757369 582 - 0.445017
TP0693 T. pallidum predicted coding region TP0693chromosome CDS760213 1323 - 0.566893
TP0697 T. pallidum predicted coding region TP0697chromosome CDS765139 609 - 0.56486
TP0698 T. pallidum predicted coding region TP0698chromosome CDS765778 546 - 0.531136
TP0699 T. pallidum predicted coding region TP0699chromosome CDS766320 111 - 0.558559
TP0700 T. pallidum predicted coding region TP0700chromosome CDS766436 393 - 0.569975
TP0703 T. pallidum predicted coding region TP0703chromosome CDS767890 681 - 0.577093
TP0707 T. pallidum predicted coding region TP0707chromosome CDS774772 480 - 0.635417
TP0708 T. pallidum predicted coding region TP0708chromosome CDS775317 516 + 0.583333
TP0711 conserved hypothetical proteinchromosome CDS778692 573 + 0.530541
TP0719 hypothetical proteinchromosome CDS786697 789 - 0.557668
TP0723 T. pallidum predicted coding region TP0723chromosome CDS790043 135 - 0.555556
TP0733 T. pallidum predicted coding region TP0733chromosome CDS798392 660 + 0.592424
TP0747 T. pallidum predicted coding region TP0747chromosome CDS811785 1035 - 0.501449
TP0749 T. pallidum predicted coding region TP0749chromosome CDS814922 222 - 0.378378
TP0751 T. pallidum predicted coding region TP0751chromosome CDS815821 714 + 0.565826
TP0752 T. pallidum predicted coding region TP0752chromosome CDS816672 1143 - 0.545932
TP0753 T. pallidum predicted coding region TP0753chromosome CDS817895 285 - 0.477193
TP0759 T. pallidum predicted coding region TP0759chromosome CDS822150 120 + 0.541667
TP0761 T. pallidum predicted coding region TP0761chromosome CDS824165 879 + 0.538112
TP0763 T. pallidum predicted coding region TP0763chromosome CDS826315 942 - 0.539278
TP0766 T. pallidum predicted coding region TP0766chromosome CDS830604 882 + 0.575964
TP0772 T. pallidum predicted coding region TP0772chromosome CDS839733 825 + 0.506667
TP0781 T. pallidum predicted coding region TP0781chromosome CDS848401 462 - 0.54329
TP0783 T. pallidum predicted coding region TP0783chromosome CDS849380 1134 - 0.517637
TP0784 T. pallidum predicted coding region TP0784chromosome CDS850679 600 + 0.548333
TP0785 conserved hypothetical proteinchromosome CDS851275 687 + 0.497817
TP0787 T. pallidum predicted coding region TP0787chromosome CDS852853 420 - 0.514286
TP0789 T. pallidum predicted coding region TP0789chromosome CDS854257 777 - 0.509652
TP0791 T. pallidum predicted coding region TP0791chromosome CDS857861 246 - 0.54065
TP0793 T. pallidum predicted coding region TP0793chromosome CDS859031 1620 + 0.493827
TP0795 T. pallidum predicted coding region TP0795chromosome CDS861931 159 + 0.553459
TP0799 T. pallidum predicted coding region TP0799chromosome CDS866536 153 + 0.464052
TP0802 T. pallidum predicted coding region TP0802chromosome CDS870839 330 + 0.551515
TP0811 T. pallidum predicted coding region TP0811chromosome CDS879642 126 - 0.444444
TP0813 T. pallidum predicted coding region TP0813chromosome CDS881178 1287 - 0.550117
TP0816 T. pallidum predicted coding region TP0816chromosome CDS884787 666 - 0.521021
TP0818 T. pallidum predicted coding region TP0818chromosome CDS886885 153 - 0.522876
TP0825 T. pallidum predicted coding region TP0825chromosome CDS893442 186 + 0.629032
TP0833 T. pallidum predicted coding region TP0833chromosome CDS900153 723 + 0.560166
TP0836 T. pallidum predicted coding region TP0836chromosome CDS905214 825 - 0.530909
TP0839 T. pallidum predicted coding region TP0839chromosome CDS909752 1008 - 0.50496
TP0846 T. pallidum predicted coding region TP0846chromosome CDS918430 327 - 0.538226
TP0856 T. pallidum predicted coding region TP0856chromosome CDS933121 978 + 0.584867
TP0857 T. pallidum predicted coding region TP0857chromosome CDS934101 321 - 0.64486
TP0858 T. pallidum predicted coding region TP0858chromosome CDS934406 1227 + 0.579462
TP0859 T. pallidum predicted coding region TP0859chromosome CDS935714 699 + 0.645207
TP0860 T. pallidum predicted coding region TP0860chromosome CDS936477 723 + 0.591978
TP0865 T. pallidum predicted coding region TP0865chromosome CDS943363 1440 - 0.545139
TP0867 T. pallidum predicted coding region TP0867chromosome CDS946794 186 - 0.569892
TP0869 T. pallidum predicted coding region TP0869chromosome CDS948023 237 + 0.552743
TP0871 T. pallidum predicted coding region TP0871chromosome CDS949205 162 - 0.462963
TP0873 T. pallidum predicted coding region TP0873chromosome CDS951622 603 + 0.466003
TP0874 conserved hypothetical proteinchromosome CDS952221 276 + 0.463768
TP0878 T. pallidum predicted coding region TP0878chromosome CDS954770 951 - 0.440589
TP0896 T. pallidum predicted coding region TP0896chromosome CDS974182 153 - 0.496732
TP0897 tpr protein K (tprK)chromosome CDS974316 1518 - 0.513175
TP0900 T. pallidum predicted coding region TP0900chromosome CDS980112 2394 - 0.558062
TP0904 T. pallidum predicted coding region TP0904chromosome CDS986471 252 + 0.5
TP0910 T. pallidum predicted coding region TP0910chromosome CDS988983 921 + 0.571118
TP0916 T. pallidum predicted coding region TP0916chromosome CDS993898 129 + 0.55814
TP0922 T. pallidum predicted coding region TP0922chromosome CDS1000721 894 - 0.652125
TP0923 T. pallidum predicted coding region TP0923chromosome CDS1001653 1020 - 0.565686
TP0928 T. pallidum predicted coding region TP0928chromosome CDS1008605 741 + 0.593792
TP0929 T. pallidum predicted coding region TP0929chromosome CDS1009357 771 + 0.552529
TP0930 T. pallidum predicted coding region TP0930chromosome CDS1010151 1722 + 0.506388
TP0932 T. pallidum predicted coding region TP0932chromosome CDS1013396 93 - 0.537634
TP0938 T. pallidum predicted coding region TP0938chromosome CDS1019481 831 - 0.551143
TP0940 T. pallidum predicted coding region TP0940chromosome CDS1023946 141 - 0.546099
TP0941 T. pallidum predicted coding region TP0941chromosome CDS1024125 519 - 0.50289
TP0955 T. pallidum predicted coding region TP0955chromosome CDS1036644 273 - 0.538462
TP0956 T. pallidum predicted coding region TP0956chromosome CDS1037012 972 + 0.5607
TP0966 T. pallidum predicted coding region TP0966chromosome CDS1047529 1635 - 0.588379
TP0967 T. pallidum predicted coding region TP0967chromosome CDS1049210 1554 - 0.602317
TP0968 T. pallidum predicted coding region TP0968chromosome CDS1050760 1623 - 0.599507
TP0970 T. pallidum predicted coding region TP0970chromosome CDS1053995 117 - 0.555556
TP0974 T. pallidum predicted coding region TP0974chromosome CDS1058050 282 - 0.560284
TP0976 T. pallidum predicted coding region TP0976chromosome CDS1059255 1380 + 0.586232
TP0983 T. pallidum predicted coding region TP0983chromosome CDS1065899 717 + 0.531381
TP0987 T. pallidum predicted coding region TP0987chromosome CDS1071496 171 - 0.549708
TP0989 P26chromosome CDS1072605 873 - 0.573883
TP0992 conserved hypothetical proteinchromosome CDS1076880 288 + 0.618056
TP0996 conserved hypothetical proteinchromosome CDS1080870 1617 - 0.50402
TP1000 T. pallidum predicted coding region TP1000chromosome CDS1088624 672 + 0.532738
TP1003 T. pallidum predicted coding region TP1003chromosome CDS1091493 1038 + 0.529865
TP1014 T. pallidum predicted coding region TP1014chromosome CDS1104457 1935 - 0.563824
TP1030 T. pallidum predicted coding region TP1030chromosome CDS1123829 498 - 0.618474
TP1031 tpr protein L (tprL)chromosome CDS1124354 1545 + 0.579288
TP1032 T. pallidum predicted coding region TP1032chromosome CDS1125966 435 - 0.694253