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2024-05-20 01:20:30

Gene list

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COG category: Unclassified
Organism: Plasmid F

Number of genes found: 80

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Plasmid F
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
artA RecName: Full=Protein ArtA; Plasmid F CDS82206 315 - 0.336508
ccdB(letD) RecName: Full=Toxin CcdB; AltName: Full=Cytotoxic protein CcdB; AltName: Full=LynB; AltName: Full=Protein G; AltName: Full=Protein LetD; Plasmid F CDS46560 306 + 0.503268
flmA RecName: Full=Stable plasmid inheritance protein; AltName: Full=F leading maintenance protein; Plasmid F CDS62976 159 + 0.477987
flmC RecName: Full=Protein FlmC; AltName: Full=F-plasmid maintenance protein C; Plasmid F CDS62918 213 + 0.483568
ompP RecName: Full=Outer membrane protease OmpP; EC=3.4.23.-; Flags: Precursor; Plasmid F CDS32322 948 + 0.418776
pifA RecName: Full=Phage T7 exclusion protein; Plasmid F CDS42445 2226 - 0.484277
psiA RecName: Full=Protein PsiA; Plasmid F CDS61982 720 + 0.602778
psiB RecName: Full=Protein PsiB; Plasmid F CDS61551 435 + 0.567816
repA2 replication regulatory proteinRecName: Full=Replication regulatory protein RepA2; AltName: Full=Protein CopB; Plasmid F CDS3359 258 + 0.492248
repB RecName: Full=RepFIB replication protein A; Plasmid F CDS36643 978 - 0.521472
repC replication proteinRecName: Full=Transcriptional repressor PifC; Short=Protein C; Plasmid F CDS44672 1092 - 0.630037
repE replication initiation proteinRecName: Full=Replication initiation protein; Short=Protein E; Short=Protein rep; AltName: Full=Protein F4; Plasmid F CDS48446 756 + 0.472222
repL RecName: Full=Positive regulator of RepFIC repA1 expression; AltName: Full=RepA1 leader peptide; Plasmid F CDS3850 75 + 0.466667
srnB RecName: Full=Protein SrnB; Plasmid F CDS2869 207 + 0.458937
srnB' RecName: Full=Protein SrnB; Plasmid F CDS2926 150 + 0.48
tnpA RecName: Full=Transposase for transposon gamma-delta; AltName: Full=Transposon Tn1000 transposase; Plasmid F CDS7130 3009 + 0.484546
tnpX RecName: Full=Putative transposon gamma-delta 80.3 kDa protein; AltName: Full=Transposon Tn1000 protein TnpX; Plasmid F CDS4303 2097 - 0.343348
traA prepropilinRecName: Full=Pilin; AltName: Full=F-pilin; Flags: Precursor; Plasmid F CDS68265 366 + 0.516393
traB RecName: Full=Protein TraB; Plasmid F CDS70259 1428 + 0.572829
traD RecName: Full=Coupling protein TraD; AltName: Full=DNA transport protein TraD; Plasmid F CDS89804 2154 + 0.52182
traE RecName: Full=Protein TraE; Plasmid F CDS68978 567 + 0.469136
traF RecName: Full=Protein TraF; Flags: Precursor; Plasmid F CDS81068 774 + 0.509044
traG RecName: Full=Protein TraG; Contains: RecName: Full=Protein TraG*; Plasmid F CDS85425 2817 + 0.503727
traH RecName: Full=Protein TraH; Flags: Precursor; Plasmid F CDS84052 1377 + 0.51634
traJ RecName: Full=Protein TraJ; Plasmid F CDS67049 690 + 0.334783
traK RecName: Full=TraK lipoprotein; Flags: Precursor; Plasmid F CDS69531 729 + 0.569273
traL RecName: Full=Protein TraL; Plasmid F CDS68645 312 + 0.471154
traM RecName: Full=Relaxosome protein TraM; Plasmid F CDS66479 384 + 0.385417
traN RecName: Full=Protein TraN; Flags: Precursor; Plasmid F CDS79013 1809 + 0.525152
traP RecName: Full=Protein TraP; Plasmid F CDS71676 591 + 0.502538
traQ RecName: Full=Protein TraQ; Plasmid F CDS82601 285 + 0.533333
traS surface exclusion protienRecName: Full=Protein TraS; Plasmid F CDS88274 522 + 0.346743
traT surface exclusion protienRecName: Full=TraT complement resistance protein; Flags: Precursor; Plasmid F CDS88817 735 + 0.502041
traU RecName: Full=Protein TraU; Flags: Precursor; Plasmid F CDS77377 993 + 0.55287
traV RecName: Full=Protein TraV; Flags: Precursor; Plasmid F CDS72710 516 + 0.532946
traW RecName: Full=Protein TraW; Flags: Precursor; Plasmid F CDS76748 633 + 0.595577
traX RecName: Full=Protein TraX; Plasmid F CDS97963 747 + 0.579652
traY RecName: Full=Relaxosome protein TraY; Plasmid F CDS67837 396 + 0.381313
trbA RecName: Full=Protein TrbA; Plasmid F CDS81857 348 + 0.41092
trbC RecName: Full=Periplasmic protein TrbC; Flags: Precursor; Plasmid F CDS78378 639 + 0.552426
trbD RecName: Full=Protein TrbD; Plasmid F CDS72253 198 + 0.409091
trbE RecName: Full=Protein TrbE; Plasmid F CDS80845 261 + 0.409962
trbF RecName: Full=Protein TrbF; Plasmid F CDS83675 381 + 0.380577
trbG RecName: Full=Protein TrbG; Plasmid F CDS72462 252 + 0.424603
trbH RecName: Full=Protein TrbH; Plasmid F CDS91957 720 + 0.490278
trbI RecName: Full=Protein TrbI; Plasmid F CDS76365 387 + 0.576227
trbJ RecName: Full=Protein TrbJ; Plasmid F CDS83347 342 + 0.45614
yacA RecName: Full=Uncharacterized protein YuaA; Plasmid F CDS2110 441 + 0.419501
ybbA RecName: Full=Uncharacterized protein YuaC; Plasmid F CDS11900 414 - 0.301932
ybdA RecName: Full=Uncharacterized protein YuaE; Flags: Precursor; Plasmid F CDS13047 414 - 0.335749
ybdB RecName: Full=Uncharacterized membrane protein YuaF; Plasmid F CDS13453 603 - 0.280265
ybgA RecName: Full=Uncharacterized protein YuaG; Plasmid F CDS16317 255 - 0.517647
ybhA RecName: Full=Uncharacterized protein YuaH; Plasmid F CDS17216 333 + 0.558559
ybiB RecName: Full=Uncharacterized protein YuaK; Plasmid F CDS18858 285 + 0.494737
ycaA RecName: Full=Uncharacterized protein YuaM; Plasmid F CDS20096 696 - 0.28592
ycbA RecName: Full=Uncharacterized protein YuaN; Plasmid F CDS21222 234 - 0.311966
ycbB RecName: Full=Uncharacterized protein YuaO; Flags: Precursor; Plasmid F CDS21541 5277 - 0.406291
ycgA RecName: Full=Uncharacterized membrane protein YuaP; Plasmid F CDS26990 270 + 0.285185
ychA RecName: Full=Uncharacterized protein YuaQ; Plasmid F CDS27486 4116 - 0.447522
ydfA RecName: Full=Uncharacterized protein YuaS; Plasmid F CDS35217 288 + 0.5
ydhA RecName: Full=Uncharacterized protein YuaT; Plasmid F CDS37942 462 - 0.493506
ydiA RecName: Full=Uncharacterized protein YuaU; Plasmid F CDS38460 642 - 0.524922
ydjA RecName: Full=Uncharacterized protein YuaV; Plasmid F CDS39088 231 + 0.536797
yeaA RecName: Full=Uncharacterized protein YuaW; Plasmid F CDS40634 237 - 0.50211
yebA RecName: Full=Uncharacterized protein YuaX; Plasmid F CDS41216 291 + 0.457045
yebB RecName: Full=Uncharacterized protein YuaY; Plasmid F CDS41496 900 + 0.472222
yfcA RecName: Full=Uncharacterized protein YuaZ; Plasmid F CDS52569 273 + 0.608059
yfcB RecName: Full=Uncharacterized protein YubA; Plasmid F CDS52855 507 + 0.552268
yfdA RecName: Full=Uncharacterized protein YubB; Plasmid F CDS53343 438 + 0.538813
yfdB RecName: Full=Uncharacterized protein YubC; Plasmid F CDS53784 306 + 0.640523
yfeB RecName: Full=Uncharacterized protein YubE; Plasmid F CDS54850 222 + 0.536036
yffA RecName: Full=Uncharacterized protein YubF; Plasmid F CDS55085 435 + 0.581609
yffB RecName: Full=Uncharacterized protein YubG; Plasmid F CDS55565 777 + 0.608752
yfgA RecName: Full=Uncharacterized protein YubH; Flags: Precursor; Plasmid F CDS56429 312 + 0.644231
yfgB RecName: Full=Putative antirestriction protein YubI; Plasmid F CDS56755 426 + 0.549296
yfhB RecName: Full=Uncharacterized serine-rich protein YubK; Flags: Precursor; Plasmid F CDS57956 399 + 0.60401
yfjA RecName: Full=UPF0401 protein YubL; Plasmid F CDS59233 240 + 0.508333
ygdA RecName: Full=Uncharacterized protein YubN; Plasmid F CDS63372 318 - 0.622642
ygeA RecName: Full=Uncharacterized protein YubO; Plasmid F CDS64032 288 + 0.527778
ygeB RecName: Full=UPF0380 protein YubP; Plasmid F CDS64438 822 + 0.442822