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2024-05-17 10:58:57

Gene list

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COG category: Unclassified
Organism: Yersinia pestis CO92, CO-92 Biovar Orientalis

Number of genes found: 88

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Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YMT1.42Ac hypothetical protein YPMT1.42AcSubName: Full=Uncharacterized protein; pMT1 CDS44876 147 - 0.455782
YPCD1.05c putative yopE chaperoneRecName: Full=YopE regulator; pCD1 CDS3014 393 - 0.409669
YPCD1.06 putative outer membrane virulence proteinRecName: Full=Outer membrane virulence protein YopE; pCD1 CDS3600 660 + 0.510606
YPCD1.07 hypothetical protein YPCD1.07SubName: Full=Uncharacterized protein; pCD1 CDS4261 297 + 0.373737
YPCD1.10c SubName: Full=YPCD1.10c protein; Flags: Fragment; pCD1 CDS5149 249 - 0.429719
YPCD1.18c SubName: Full=YPCD1.18c protein; Flags: Fragment; pCD1 CDS11260 144 - 0.527778
YPCD1.19c putative virulence determinant proteinSubName: Full=Putative virulence determinant protein; SubName: Full=Type III secretion negative modulator of injection; SubName: Full=Yop targeting protein; SubName: Full=YopK (YopQ) homolog; pCD1 CDS11562 549 - 0.335155
YPCD1.20 putative cytotoxic effector proteinRecName: Full=Cysteine protease YopT; EC=3.4.22.-; pCD1 CDS12610 969 + 0.431373
YPCD1.21 putative yopT chaperoneRecName: Full=Chaperone protein SycT; pCD1 CDS13578 399 + 0.411028
YPCD1.22c hypothetical protein YPCD1.22cSubName: Full=Uncharacterized protein; pCD1 CDS14020 390 - 0.276923
YPCD1.23 hypothetical protein YPCD1.23SubName: Full=Uncharacterized protein; pCD1 CDS14681 420 + 0.388095
YPCD1.24c SubName: Full=YPCD1.24c protein; Flags: Fragment; pCD1 CDS15628 219 - 0.461187
YPCD1.31c putative V antigen, antihost protein/regulatorRecName: Full=Virulence-associated V antigen; AltName: Full=Low calcium response locus protein V; pCD1 CDS21935 981 - 0.377166
YPCD1.33c hypothetical protein lcrRRecName: Full=Low calcium response locus protein R; pCD1 CDS23246 441 - 0.487528
YPCD1.36c putative type III secretion proteinRecName: Full=Yop proteins translocation protein X; pCD1 CDS26125 369 - 0.495935
YPCD1.37c putative type III secretion proteinRecName: Full=Chaperone protein SycN; pCD1 CDS26490 372 - 0.526882
YPCD1.38c putative Yop secretion and targeting proteinRecName: Full=Protein TyeA; pCD1 CDS26848 279 - 0.433692
YPCD1.39c putative membrane-bound Yop targeting proteinRecName: Full=Outer membrane protein YopN; AltName: Full=LcrE; AltName: Full=Yop4b; pCD1 CDS27107 882 - 0.461451
YPCD1.41 putative type III secretion proteinSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscO; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein O; SubName: Full=YscO; pCD1 CDS29502 465 + 0.458065
YPCD1.42 putative type III secretion proteinRecName: Full=Yop proteins translocation protein P; pCD1 CDS29966 1368 + 0.486842
YPCD1.48 putative Yop targeting lipoproteinSubName: Full=Pre-lipoprotein VirG homolog; SubName: Full=Putative Yop targeting lipoprotein; SubName: Full=Putative Yop targeting lipoprotein VirG; SubName: Full=YscC lipoprotein chaperone; pCD1 CDS35593 396 + 0.444444
YPCD1.50 hypothetical protein YPCD1.50RecName: Full=Yop proteins translocation protein A; pCD1 CDS37006 99 + 0.313131
YPCD1.54 putative type III secretion proteinSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscE; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein E homolog; pCD1 CDS40825 201 + 0.422886
YPCD1.55 putative type III secretion proteinSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscF; SubName: Full=Type III secretion cytoplasmic protein; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein F homolog; pCD1 CDS41026 264 + 0.416667
YPCD1.56 putative type III secretion proteinSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscG; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein G homolog; pCD1 CDS41291 348 + 0.439655
YPCD1.60 putative type III secretion proteinRecName: Full=Yop proteins translocation protein K; AltName: Full=Low calcium response locus protein KB; pCD1 CDS43221 630 + 0.485714
YPCD1.67c putative protein-tyrosine phosphatase Yop effectorSubName: Full=Targeted effector protein; SubName: Full=Type III secretion injected virulence protein; SubName: Full=Uncharacterized protein; SubName: Full=YopH; pCD1 CDS47122 1407 - 0.474058
YPCD1.70c SubName: Full=YPCD1.70c protein; Flags: Fragment; pCD1 CDS49657 99 - 0.40404
YPCD1.71c putative targeted effector proteinSubName: Full=Putative targeted effector protein; pCD1 CDS50211 867 - 0.344867
YPCD1.73c hypothetical protein YPCD1.73cSubName: Full=Hypothetial protein; SubName: Full=Uncharacterized protein; pCD1 CDS53679 450 - 0.451111
YPCD1.74c SubName: Full=YPCD1.74c protein; Flags: Fragment; pCD1 CDS54368 117 - 0.470085
YPCD1.77c putative replication initiation proteinSubName: Full=Putative replication initiation protein; SubName: Full=Replication protein; SubName: Full=Replication protein RepA-like protein; pCD1 CDS56291 867 - 0.542099
YPCD1.78c putative repA translation proteinSubName: Full=Putative repA translation protein; SubName: Full=RepA translation protein; pCD1 CDS57150 75 - 0.44
YPCD1.89 SubName: Full=Putative transposase homolog; SubName: Full=YPCD1.89 protein; pCD1 CDS62474 381 + 0.509186
YPCD1.92 hypothetical protein YPCD1.92SubName: Full=Uncharacterized protein; pCD1 CDS66503 330 + 0.281818
YPCD1.95c putative yopH targeting proteinSubName: Full=Putative yopH targeting protein; SubName: Full=Putative yopH targeting protein SycH; SubName: Full=YopH chaperone; SubName: Full=YopH chaperone SycH protein homolog; pCD1 CDS68179 426 - 0.41784
YPMT1.03c hypothetical protein YPMT1.03cSubName: Full=Lambda tail fiber assembly protein G; SubName: Full=Phage lambda-related tail assembly protein G; SubName: Full=Uncharacterized protein; pMT1 CDS2022 609 - 0.456486
YPMT1.04c putative phage tail proteinSubName: Full=Putative phage tail protein; pMT1 CDS2932 2889 - 0.499135
YPMT1.05c hypothetical protein YPMT1.05cSubName: Full=Uncharacterized protein; pMT1 CDS5901 618 - 0.496764
YPMT1.12c hypothetical protein YPMT1.12cSubName: Full=Uncharacterized protein; pMT1 CDS18304 270 - 0.551852
YPMT1.13c hypothetical protein YPMT1.13cSubName: Full=Uncharacterized protein; pMT1 CDS18654 318 - 0.5
YPMT1.17c hypothetical protein YPMT1.17cSubName: Full=Uncharacterized protein; pMT1 CDS20701 459 - 0.535948
YPMT1.18c hypothetical protein YPMT1.18cSubName: Full=Uncharacterized protein; pMT1 CDS21143 834 - 0.544365
YPMT1.19c hypothetical protein YPMT1.19cSubName: Full=Uncharacterized protein; pMT1 CDS21976 435 - 0.51954
YPMT1.21c hypothetical protein YPMT1.21cSubName: Full=Uncharacterized protein; pMT1 CDS23191 876 - 0.539954
YPMT1.23c hypothetical protein YPMT1.23cSubName: Full=Uncharacterized protein; pMT1 CDS24949 1590 - 0.509434
YPMT1.24c hypothetical protein YPMT1.24cSubName: Full=Uncharacterized protein; pMT1 CDS26557 1257 - 0.540971
YPMT1.25Ac hypothetical protein YPMT1.25AcSubName: Full=RGD cell attachment site containing protein; SubName: Full=Uncharacterized protein; pMT1 CDS28653 267 - 0.524345
YPMT1.25c hypothetical protein YPMT1.25cSubName: Full=Uncharacterized protein; pMT1 CDS27816 642 - 0.556075
YPMT1.32 putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Uncharacterized protein; pMT1 CDS34038 423 + 0.541371
YPMT1.33 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; SubName: Full=Repressor of phase 1 fagellin homolog; pMT1 CDS34465 528 + 0.517045
YPMT1.34 hypothetical protein YPMT1.34SubName: Full=Uncharacterized protein; pMT1 CDS35314 651 + 0.394777
YPMT1.34A hypothetical protein YPMT1.34ASubName: Full=Uncharacterized protein; pMT1 CDS36049 228 + 0.372807
YPMT1.35c hypothetical protein YPMT1.35cSubName: Full=Uncharacterized protein; pMT1 CDS36915 483 - 0.503106
YPMT1.36c hypothetical protein YPMT1.36cSubName: Full=Uncharacterized protein; pMT1 CDS37603 288 - 0.524306
YPMT1.38c hypothetical protein YPMT1.38cSubName: Full=Uncharacterized protein; pMT1 CDS38751 570 - 0.52807
YPMT1.39c hypothetical protein YPMT1.39cSubName: Full=Uncharacterized protein; pMT1 CDS39333 747 - 0.497992
YPMT1.3Ac hypothetical protein YPMT1.3AcSubName: Full=Uncharacterized protein; pMT1 CDS2723 213 - 0.42723
YPMT1.40Ac hypothetical protein YPMT1.40AcSubName: Full=Uncharacterized protein; pMT1 CDS41994 225 - 0.484444
YPMT1.43c hypothetical protein YPMT1.43cSubName: Full=Uncharacterized protein; pMT1 CDS45098 645 - 0.528682
YPMT1.44 putative replication protein ASubName: Full=Putative replication protein A; SubName: Full=RepA homolog; SubName: Full=Replication protein A; pMT1 CDS46487 1065 + 0.514554
YPMT1.45c hypothetical protein YPMT1.45cSubName: Full=Hypothetical regulator; SubName: Full=Uncharacterized protein; pMT1 CDS48120 216 - 0.550926
YPMT1.46Ac hypothetical protein YPMT1.46AcSubName: Full=Uncharacterized protein; pMT1 CDS48664 180 - 0.455556
YPMT1.46Bc hypothetical protein YPMT1.46BcSubName: Full=Uncharacterized protein; pMT1 CDS48884 276 - 0.467391
YPMT1.46c hypothetical protein YPMT1.46cSubName: Full=Uncharacterized protein; pMT1 CDS48332 336 - 0.505952
YPMT1.47c hypothetical protein YPMT1.47cSubName: Full=Uncharacterized protein; pMT1 CDS49227 411 - 0.559611
YPMT1.49Ac hypothetical protein YPMT1.49AcSubName: Full=Uncharacterized protein; pMT1 CDS50980 201 - 0.447761
YPMT1.50Ac hypothetical protein YPMT1.50AcSubName: Full=Uncharacterized protein; pMT1 CDS52350 267 - 0.546816
YPMT1.52c hypothetical protein YPMT1.52cSubName: Full=P2 protein homolog; SubName: Full=Uncharacterized protein; pMT1 CDS53621 1029 - 0.519922
YPMT1.54 hypothetical protein YPMT1.54SubName: Full=Uncharacterized protein; pMT1 CDS55745 564 + 0.512411
YPMT1.55c hypothetical protein YPMT1.55cSubName: Full=Uncharacterized protein; pMT1 CDS56338 444 - 0.518018
YPMT1.60c hypothetical protein YPMT1.60cRecName: Full=UPF0401 protein YubL; pMT1 CDS61340 231 - 0.593074
YPMT1.62c hypothetical protein YPMT1.62cSubName: Full=Uncharacterized protein; pMT1 CDS63188 780 - 0.552564
YPMT1.63Ac hypothetical protein YPMT1.63AcSubName: Full=Putative cytoplasmic protein; SubName: Full=Uncharacterized protein; pMT1 CDS64451 222 - 0.536036
YPMT1.63c hypothetical protein YPMT1.63cSubName: Full=Uncharacterized protein; pMT1 CDS64021 492 - 0.558943
YPMT1.65 hypothetical protein YPMT1.65SubName: Full=Uncharacterized protein; pMT1 CDS65742 309 + 0.504854
YPMT1.68A hypothetical protein YPMT1.68ASubName: Full=Prevent-host-death family protein; SubName: Full=Uncharacterized protein; pMT1 CDS70463 228 + 0.434211
YPMT1.69 hypothetical protein YPMT1.69SubName: Full=Inner membrane protein; SubName: Full=Uncharacterized protein; pMT1 CDS70690 327 + 0.434251
YPMT1.72c hypothetical protein YPMT1.72cSubName: Full=Uncharacterized protein; pMT1 CDS72866 276 - 0.518116
YPMT1.76 hypothetical protein YPMT1.76SubName: Full=Uncharacterized protein; pMT1 CDS76996 309 + 0.566343
YPMT1.76A hypothetical protein YPMT1.76ASubName: Full=Uncharacterized protein; pMT1 CDS77219 372 + 0.526882
YPMT1.84 putative F1 capsule antigenRecName: Full=F1 capsule antigen; Flags: Precursor; pMT1 CDS85950 513 + 0.42885
YPMT1.86A hypothetical protein YPMT1.86ASubName: Full=Uncharacterized protein; pMT1 CDS88969 213 + 0.43662
YPMT1.86c hypothetical protein YPMT1.86cSubName: Full=Uncharacterized protein; pMT1 CDS88320 387 - 0.496124
YPPCP1.03 putative replication regulatory proteinSubName: Full=Putative replication regulatory protein; pPCP1 CDS2925 195 + 0.502564
YPPCP1.04 pesticin immunity proteinSubName: Full=Pesticin immunity protein; SubName: Full=Pesticin immununity protein; pPCP1 CDS4355 426 + 0.319249
YPPCP1.05c pesticinSubName: Full=Pesticin; pPCP1 CDS4815 1074 - 0.391993
YPPCP1.06 hypothetical proteinSubName: Full=Uncharacterized protein; pPCP1 CDS6006 417 + 0.491607