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2024-05-02 22:35:52

Gene list

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COG category: Unclassified
Organism: Yersinia pestis CO92, CO-92 Biovar Orientalis

Number of genes found: 88

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YMT1.42Ac hypothetical protein YPMT1.42AcpMT1 CDS44876 147 - 0.455782
YPCD1.05c putative yopE chaperonepCD1 CDS3014 393 - 0.409669
YPCD1.06 putative outer membrane virulence proteinpCD1 CDS3600 660 + 0.510606
YPCD1.07 hypothetical protein YPCD1.07pCD1 CDS4261 297 + 0.373737
YPCD1.10c pCD1 CDS5149 249 - 0.429719
YPCD1.18c pCD1 CDS11260 144 - 0.527778
YPCD1.19c putative virulence determinant proteinpCD1 CDS11562 549 - 0.335155
YPCD1.20 putative cytotoxic effector proteinpCD1 CDS12610 969 + 0.431373
YPCD1.21 putative yopT chaperonepCD1 CDS13578 399 + 0.411028
YPCD1.22c hypothetical protein YPCD1.22cpCD1 CDS14020 390 - 0.276923
YPCD1.23 hypothetical protein YPCD1.23pCD1 CDS14681 420 + 0.388095
YPCD1.24c pCD1 CDS15628 219 - 0.461187
YPCD1.31c putative V antigen, antihost protein/regulatorpCD1 CDS21935 981 - 0.377166
YPCD1.33c hypothetical protein lcrRpCD1 CDS23246 441 - 0.487528
YPCD1.36c putative type III secretion proteinpCD1 CDS26125 369 - 0.495935
YPCD1.37c putative type III secretion proteinpCD1 CDS26490 372 - 0.526882
YPCD1.38c putative Yop secretion and targeting proteinpCD1 CDS26848 279 - 0.433692
YPCD1.39c putative membrane-bound Yop targeting proteinpCD1 CDS27107 882 - 0.461451
YPCD1.41 putative type III secretion proteinpCD1 CDS29502 465 + 0.458065
YPCD1.42 putative type III secretion proteinpCD1 CDS29966 1368 + 0.486842
YPCD1.48 putative Yop targeting lipoproteinpCD1 CDS35593 396 + 0.444444
YPCD1.50 hypothetical protein YPCD1.50pCD1 CDS37006 99 + 0.313131
YPCD1.54 putative type III secretion proteinpCD1 CDS40825 201 + 0.422886
YPCD1.55 putative type III secretion proteinpCD1 CDS41026 264 + 0.416667
YPCD1.56 putative type III secretion proteinpCD1 CDS41291 348 + 0.439655
YPCD1.60 putative type III secretion proteinpCD1 CDS43221 630 + 0.485714
YPCD1.67c putative protein-tyrosine phosphatase Yop effectorpCD1 CDS47122 1407 - 0.474058
YPCD1.70c pCD1 CDS49657 99 - 0.40404
YPCD1.71c putative targeted effector proteinpCD1 CDS50211 867 - 0.344867
YPCD1.73c hypothetical protein YPCD1.73cpCD1 CDS53679 450 - 0.451111
YPCD1.74c pCD1 CDS54368 117 - 0.470085
YPCD1.77c putative replication initiation proteinpCD1 CDS56291 867 - 0.542099
YPCD1.78c putative repA translation proteinpCD1 CDS57150 75 - 0.44
YPCD1.89 pCD1 CDS62474 381 + 0.509186
YPCD1.92 hypothetical protein YPCD1.92pCD1 CDS66503 330 + 0.281818
YPCD1.95c putative yopH targeting proteinpCD1 CDS68179 426 - 0.41784
YPMT1.03c hypothetical protein YPMT1.03cpMT1 CDS2022 609 - 0.456486
YPMT1.04c putative phage tail proteinpMT1 CDS2932 2889 - 0.499135
YPMT1.05c hypothetical protein YPMT1.05cpMT1 CDS5901 618 - 0.496764
YPMT1.12c hypothetical protein YPMT1.12cpMT1 CDS18304 270 - 0.551852
YPMT1.13c hypothetical protein YPMT1.13cpMT1 CDS18654 318 - 0.5
YPMT1.17c hypothetical protein YPMT1.17cpMT1 CDS20701 459 - 0.535948
YPMT1.18c hypothetical protein YPMT1.18cpMT1 CDS21143 834 - 0.544365
YPMT1.19c hypothetical protein YPMT1.19cpMT1 CDS21976 435 - 0.51954
YPMT1.21c hypothetical protein YPMT1.21cpMT1 CDS23191 876 - 0.539954
YPMT1.23c hypothetical protein YPMT1.23cpMT1 CDS24949 1590 - 0.509434
YPMT1.24c hypothetical protein YPMT1.24cpMT1 CDS26557 1257 - 0.540971
YPMT1.25Ac hypothetical protein YPMT1.25AcpMT1 CDS28653 267 - 0.524345
YPMT1.25c hypothetical protein YPMT1.25cpMT1 CDS27816 642 - 0.556075
YPMT1.32 putative lipoproteinpMT1 CDS34038 423 + 0.541371
YPMT1.33 putative transcriptional regulatorpMT1 CDS34465 528 + 0.517045
YPMT1.34 hypothetical protein YPMT1.34pMT1 CDS35314 651 + 0.394777
YPMT1.34A hypothetical protein YPMT1.34ApMT1 CDS36049 228 + 0.372807
YPMT1.35c hypothetical protein YPMT1.35cpMT1 CDS36915 483 - 0.503106
YPMT1.36c hypothetical protein YPMT1.36cpMT1 CDS37603 288 - 0.524306
YPMT1.38c hypothetical protein YPMT1.38cpMT1 CDS38751 570 - 0.52807
YPMT1.39c hypothetical protein YPMT1.39cpMT1 CDS39333 747 - 0.497992
YPMT1.3Ac hypothetical protein YPMT1.3AcpMT1 CDS2723 213 - 0.42723
YPMT1.40Ac hypothetical protein YPMT1.40AcpMT1 CDS41994 225 - 0.484444
YPMT1.43c hypothetical protein YPMT1.43cpMT1 CDS45098 645 - 0.528682
YPMT1.44 putative replication protein ApMT1 CDS46487 1065 + 0.514554
YPMT1.45c hypothetical protein YPMT1.45cpMT1 CDS48120 216 - 0.550926
YPMT1.46Ac hypothetical protein YPMT1.46AcpMT1 CDS48664 180 - 0.455556
YPMT1.46Bc hypothetical protein YPMT1.46BcpMT1 CDS48884 276 - 0.467391
YPMT1.46c hypothetical protein YPMT1.46cpMT1 CDS48332 336 - 0.505952
YPMT1.47c hypothetical protein YPMT1.47cpMT1 CDS49227 411 - 0.559611
YPMT1.49Ac hypothetical protein YPMT1.49AcpMT1 CDS50980 201 - 0.447761
YPMT1.50Ac hypothetical protein YPMT1.50AcpMT1 CDS52350 267 - 0.546816
YPMT1.52c hypothetical protein YPMT1.52cpMT1 CDS53621 1029 - 0.519922
YPMT1.54 hypothetical protein YPMT1.54pMT1 CDS55745 564 + 0.512411
YPMT1.55c hypothetical protein YPMT1.55cpMT1 CDS56338 444 - 0.518018
YPMT1.60c hypothetical protein YPMT1.60cpMT1 CDS61340 231 - 0.593074
YPMT1.62c hypothetical protein YPMT1.62cpMT1 CDS63188 780 - 0.552564
YPMT1.63Ac hypothetical protein YPMT1.63AcpMT1 CDS64451 222 - 0.536036
YPMT1.63c hypothetical protein YPMT1.63cpMT1 CDS64021 492 - 0.558943
YPMT1.65 hypothetical protein YPMT1.65pMT1 CDS65742 309 + 0.504854
YPMT1.68A hypothetical protein YPMT1.68ApMT1 CDS70463 228 + 0.434211
YPMT1.69 hypothetical protein YPMT1.69pMT1 CDS70690 327 + 0.434251
YPMT1.72c hypothetical protein YPMT1.72cpMT1 CDS72866 276 - 0.518116
YPMT1.76 hypothetical protein YPMT1.76pMT1 CDS76996 309 + 0.566343
YPMT1.76A hypothetical protein YPMT1.76ApMT1 CDS77219 372 + 0.526882
YPMT1.84 putative F1 capsule antigenpMT1 CDS85950 513 + 0.42885
YPMT1.86A hypothetical protein YPMT1.86ApMT1 CDS88969 213 + 0.43662
YPMT1.86c hypothetical protein YPMT1.86cpMT1 CDS88320 387 - 0.496124
YPPCP1.03 putative replication regulatory proteinpPCP1 CDS2925 195 + 0.502564
YPPCP1.04 pesticin immunity proteinpPCP1 CDS4355 426 + 0.319249
YPPCP1.05c pesticinpPCP1 CDS4815 1074 - 0.391993
YPPCP1.06 hypothetical proteinpPCP1 CDS6006 417 + 0.491607