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2024-05-19 12:16:11

Gene list

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COG category: Unclassified
Organism: Salmonella typhimurium LT2, SGSC1412

Number of genes found: 57

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella typhimurium LT2, SGSC1412
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
PSLT001 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS94 285 + 0.536842
PSLT025 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS18119 297 - 0.481481
PSLT026 putative periplasmic proteinSubName: Full=Putative periplasmic protein; pSLT CDS18899 522 - 0.44636
PSLT029 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS20623 291 + 0.62543
PSLT030 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS20910 522 + 0.599617
PSLT033 putative inner membrane proteinSubName: Full=Putative inner membrane protein; pSLT CDS23477 486 + 0.687243
PSLT034 putative adhesinSubName: Full=Putative adhesin; pSLT CDS24682 561 + 0.643494
PSLT047 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS38923 489 - 0.531697
PSLT050 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS40981 327 - 0.602446
PSLT056 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS48285 471 + 0.541401
PSLT057 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS48748 357 + 0.540616
PSLT060 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS50166 222 + 0.554054
PSLT061 putative inner membrane proteinSubName: Full=Putative inner membrane protein; pSLT CDS50928 765 + 0.613072
PSLT062 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS52188 435 + 0.517241
PSLT063 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; pSLT CDS52689 435 + 0.535632
PSLT064 putative inner membrane proteinSubName: Full=Putative inner membrane protein; pSLT CDS53359 324 + 0.524691
PSLT067 putative cytoplasmic proteinRecName: Full=UPF0401 protein YubL; pSLT CDS54974 243 + 0.555556
PSLT087 conjugative transfer:SubName: Full=Conjugative transfer protein; pSLT CDS67730 468 + 0.510684
PSLT093 conjugative transfer:SubName: Full=Conjugative transfer protein; pSLT CDS73239 309 + 0.436893
ccdB toxin addiction system: toxinSubName: Full=Toxin addiction system: toxin; pSLT CDS20316 306 + 0.578431
finO conjugative transfer: regulationSubName: Full=Conjugative transfer: regulation; pSLT CDS93355 564 + 0.586879
orf5 putative outer membrane proteinSubName: Full=Putative outer membrane protein; pSLT CDS9676 558 - 0.501792
orf6 putative outer membrane proteinSubName: Full=Putative outer membrane protein; pSLT CDS8548 876 - 0.460046
pefB plasmid-encoded fimbriae;regulationSubName: Full=Plasmid-encoded fimbriaeregulation; pSLT CDS14362 303 - 0.435644
pefI plasmid-encoded fimbriae; regulatorySubName: Full=Plasmid-encoded fimbriae regulatory; pSLT CDS7904 213 - 0.502347
psiA Plasmid SOS inhibitionSubName: Full=Plasmid SOS inhibition; pSLT CDS57753 738 + 0.609756
psiB Plasmid SOS inhibitionSubName: Full=Plasmid SOS inhibition; pSLT CDS57322 435 + 0.586207
repA DNA replicationSubName: Full=DNA replication; pSLT CDS1908 882 + 0.570295
repA2 DNA replicationSubName: Full=DNA replication; pSLT CDS16636 990 - 0.521212
repA3 DNA replicationSubName: Full=DNA replication; pSLT CDS1723 123 + 0.471545
spvA Salmonella plasmid virulence: outer membrane proteinSubName: Full=Salmonella plasmid virulence: outer membrane protein; pSLT CDS30148 768 - 0.542969
spvC Salmonella plasmid virulence: hydrophilic proteinRecName: Full=MAPK phosphothreonine lyase; EC=4.2.3.-; AltName: Full=27.5 kDa virulence protein; AltName: Full=Secreted effector protein SpvC; pSLT CDS27178 726 - 0.454545
spvD Salmonella plasmid virulence: hydrophilic proteinRecName: Full=Virulence protein vsdE; pSLT CDS26267 651 - 0.328725
tap replication of plasmidSubName: Full=Replication of plasmid; pSLT CDS1850 78 + 0.410256
traA conjugative transfer: fimbrial subunitSubName: Full=Conjugative transfer: fimbrial subunit; pSLT CDS62636 363 + 0.534435
traE conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS63346 567 + 0.488536
traF conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS76687 750 + 0.532
traG conjugative transfer: assembly abd aggregate stabilitySubName: Full=Conjugative transfer: assembly abd aggregate stability; pSLT CDS79847 2823 + 0.520014
traH conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS78468 1383 + 0.539407
traK conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS63899 741 + 0.615385
traL conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS63013 312 + 0.483974
traM conjugative transfer: mating signalSubName: Full=Conjugative transfer: mating signal; pSLT CDS61014 381 + 0.35958
traN conjugative transfer: aggregate stabilitySubName: Full=Conjugative transfer: aggregate stability; pSLT CDS74623 1827 + 0.544609
traP conjugative transferSubName: Full=Conjugative transfer; pSLT CDS66050 597 + 0.515913
traQ conjugative transfer: fimbrial synthesisSubName: Full=Conjugative transfer: fimbrial synthesis; pSLT CDS77650 294 + 0.513605
traS conjugative transfer: surface exclusionSubName: Full=Conjugative transfer: surface exclusion; pSLT CDS82685 495 + 0.385859
traT conjugative transfer: surface exclusionSubName: Full=Conjugative transfer: surface exclusion; pSLT CDS83215 732 + 0.501366
traU conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS72228 993 + 0.567976
traV conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS66866 516 + 0.583333
traW conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS71599 633 + 0.616114
traX conjugative transfer: fimbrial acetylationSubName: Full=Conjugative transfer: fimbrial acetylation; pSLT CDS92560 741 + 0.607287
traY conjugative transfer: oriT nickingSubName: Full=Conjugative transfer: oriT nicking; pSLT CDS62274 321 + 0.386293
trbB conjugative transferSubName: Full=Conjugative transfer; pSLT CDS77930 549 + 0.566485
trbC conjugative transfer: assemblySubName: Full=Conjugative transfer: assembly; pSLT CDS73532 639 + 0.577465
trbE conjugative transferSubName: Full=Conjugative transfer; pSLT CDS76460 216 + 0.481481
trbH conjugative transferSubName: Full=Conjugative transfer; pSLT CDS86566 720 + 0.513889
trbI conjugative transferSubName: Full=Conjugative transfer; pSLT CDS71216 387 + 0.602067