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2024-05-07 08:04:11

Gene list

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COG category: Unclassified
Organism: Salmonella typhimurium LT2, SGSC1412

Number of genes found: 57

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella typhimurium LT2, SGSC1412
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
PSLT001 putative cytoplasmic proteinpSLT CDS94 285 + 0.536842
PSLT025 putative cytoplasmic proteinpSLT CDS18119 297 - 0.481481
PSLT026 putative periplasmic proteinpSLT CDS18899 522 - 0.44636
PSLT029 putative cytoplasmic proteinpSLT CDS20623 291 + 0.62543
PSLT030 putative cytoplasmic proteinpSLT CDS20910 522 + 0.599617
PSLT033 putative inner membrane proteinpSLT CDS23477 486 + 0.687243
PSLT034 putative adhesinpSLT CDS24682 561 + 0.643494
PSLT047 putative cytoplasmic proteinpSLT CDS38923 489 - 0.531697
PSLT050 putative cytoplasmic proteinpSLT CDS40981 327 - 0.602446
PSLT056 putative cytoplasmic proteinpSLT CDS48285 471 + 0.541401
PSLT057 putative cytoplasmic proteinpSLT CDS48748 357 + 0.540616
PSLT060 putative cytoplasmic proteinpSLT CDS50166 222 + 0.554054
PSLT061 putative inner membrane proteinpSLT CDS50928 765 + 0.613072
PSLT062 putative cytoplasmic proteinpSLT CDS52188 435 + 0.517241
PSLT063 putative cytoplasmic proteinpSLT CDS52689 435 + 0.535632
PSLT064 putative inner membrane proteinpSLT CDS53359 324 + 0.524691
PSLT067 putative cytoplasmic proteinpSLT CDS54974 243 + 0.555556
PSLT087 conjugative transfer:pSLT CDS67730 468 + 0.510684
PSLT093 conjugative transfer:pSLT CDS73239 309 + 0.436893
ccdB toxin addiction system: toxinpSLT CDS20316 306 + 0.578431
finO conjugative transfer: regulationpSLT CDS93355 564 + 0.586879
orf5 putative outer membrane proteinpSLT CDS9676 558 - 0.501792
orf6 putative outer membrane proteinpSLT CDS8548 876 - 0.460046
pefB plasmid-encoded fimbriae;regulationpSLT CDS14362 303 - 0.435644
pefI plasmid-encoded fimbriae; regulatorypSLT CDS7904 213 - 0.502347
psiA Plasmid SOS inhibitionpSLT CDS57753 738 + 0.609756
psiB Plasmid SOS inhibitionpSLT CDS57322 435 + 0.586207
repA DNA replicationpSLT CDS1908 882 + 0.570295
repA2 DNA replicationpSLT CDS16636 990 - 0.521212
repA3 DNA replicationpSLT CDS1723 123 + 0.471545
spvA Salmonella plasmid virulence: outer membrane proteinpSLT CDS30148 768 - 0.542969
spvC Salmonella plasmid virulence: hydrophilic proteinpSLT CDS27178 726 - 0.454545
spvD Salmonella plasmid virulence: hydrophilic proteinpSLT CDS26267 651 - 0.328725
tap replication of plasmidpSLT CDS1850 78 + 0.410256
traA conjugative transfer: fimbrial subunitpSLT CDS62636 363 + 0.534435
traE conjugative transfer: assemblypSLT CDS63346 567 + 0.488536
traF conjugative transfer: assemblypSLT CDS76687 750 + 0.532
traG conjugative transfer: assembly abd aggregate stabilitypSLT CDS79847 2823 + 0.520014
traH conjugative transfer: assemblypSLT CDS78468 1383 + 0.539407
traK conjugative transfer: assemblypSLT CDS63899 741 + 0.615385
traL conjugative transfer: assemblypSLT CDS63013 312 + 0.483974
traM conjugative transfer: mating signalpSLT CDS61014 381 + 0.35958
traN conjugative transfer: aggregate stabilitypSLT CDS74623 1827 + 0.544609
traP conjugative transferpSLT CDS66050 597 + 0.515913
traQ conjugative transfer: fimbrial synthesispSLT CDS77650 294 + 0.513605
traS conjugative transfer: surface exclusionpSLT CDS82685 495 + 0.385859
traT conjugative transfer: surface exclusionpSLT CDS83215 732 + 0.501366
traU conjugative transfer: assemblypSLT CDS72228 993 + 0.567976
traV conjugative transfer: assemblypSLT CDS66866 516 + 0.583333
traW conjugative transfer: assemblypSLT CDS71599 633 + 0.616114
traX conjugative transfer: fimbrial acetylationpSLT CDS92560 741 + 0.607287
traY conjugative transfer: oriT nickingpSLT CDS62274 321 + 0.386293
trbB conjugative transferpSLT CDS77930 549 + 0.566485
trbC conjugative transfer: assemblypSLT CDS73532 639 + 0.577465
trbE conjugative transferpSLT CDS76460 216 + 0.481481
trbH conjugative transferpSLT CDS86566 720 + 0.513889
trbI conjugative transferpSLT CDS71216 387 + 0.602067