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2024-05-03 16:15:43

Gene list

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COG category: Unclassified
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 138

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0793 Unknown proteinchromosome CDS766600 876 + 0.30137
NA SAR11_0470 unknown proteinchromosome CDS462540 198 + 0.333333
NA SAR11_0451 BolA-like proteinchromosome CDS447870 288 + 0.194444
NA SAR11_0281 Unknown proteinchromosome CDS284844 510 - 0.284314
NA SAR11_1321 unknownchromosome CDS1256001 438 - 0.321918
NA SAR11_1301 unknown membrane proteinchromosome CDS1234804 480 - 0.222917
NA SAR11_1164 possible lipoproteinchromosome CDS1119848 564 - 0.315603
NA SAR11_0167 Unknown proteinchromosome CDS170900 681 + 0.246696
NA SAR11_1026 unknownchromosome CDS1003487 225 - 0.257778
NA SAR11_0690 unknownchromosome CDS674846 195 - 0.34359
NA SAR11_0827 Unknown proteinchromosome CDS797837 207 - 0.227053
NA SAR11_1256 unknownchromosome CDS1197066 198 + 0.237374
NA SAR11_0461 Unknown proteinchromosome CDS455363 195 - 0.271795
NA SAR11_1728 unknownchromosome CDS1117162 282 + 0.326241
NA SAR11_0931 putative transmembrane proteinchromosome CDS895470 228 + 0.315789
NA SAR11_0075 Unknown proteinchromosome CDS89886 663 - 0.325792
NA SAR11_1182 Unknownchromosome CDS1136415 183 - 0.26776
NA SAR11_0071 type IV pilin secretion proteinchromosome CDS86437 855 - 0.31345
NA SAR11_0971 unknown proteinchromosome CDS954435 264 + 0.189394
NA SAR11_0047 probable transcription regulatory proteinchromosome CDS58036 969 + 0.237358
NA SAR11_0647 Glycosyl transferase family 8chromosome CDS633949 912 + 0.303728
NA SAR11_1183 hypothetical proteinchromosome CDS1136605 375 - 0.328
NA SAR11_1162 unknownchromosome CDS1118568 651 - 0.290323
NA SAR11_1133 conserved hypothetical proteinchromosome CDS1088896 402 - 0.238806
NA SAR11_1233 Domain of unknown function (DUF931)chromosome CDS1177163 276 - 0.282609
NA SAR11_0792 Unknown proteinchromosome CDS766031 471 + 0.246284
NA SAR11_0568 D-amino acid oxidoreductase familychromosome CDS559270 1215 + 0.230453
NA SAR11_0549 unknown membrane proteinchromosome CDS541643 1212 - 0.20297
NA SAR11_1730 putative membrane proteinchromosome CDS1127554 165 - 0.266667
NA SAR11_1230 unknownchromosome CDS1175268 426 - 0.206573
NA SAR11_1165 possible exonucleasechromosome CDS1120857 360 + 0.280556
NA SAR11_1267 unknownchromosome CDS1204114 171 - 0.251462
NA SAR11_0315 potential esterasechromosome CDS312112 624 - 0.275641
NA SAR11_0318 Conserved hypothetical proteinchromosome CDS316069 1611 + 0.248293
NA SAR11_1188 unknownchromosome CDS1140479 489 - 0.339468
NA SAR11_0182 Unknown proteinchromosome CDS183941 306 - 0.277778
NA SAR11_1241 unknownchromosome CDS1183727 162 - 0.314815
NA SAR11_0795 Unknown proteinchromosome CDS768206 954 + 0.303983
NA SAR11_0045 Unknown proteinchromosome CDS55348 345 + 0.313043
NA SAR11_0358 hypothetical proteinchromosome CDS351261 558 - 0.302867
NA SAR11_0636 conserved hypothetical proteinchromosome CDS622553 570 + 0.266667
NA SAR11_0959 unknown proteinchromosome CDS941232 1158 + 0.294473
NA SAR11_0043 Unknown proteinchromosome CDS52886 141 - 0.283688
NA SAR11_0543 unknown membrane proteinchromosome CDS537246 456 + 0.142544
NA SAR11_0471 Unknown proteinchromosome CDS462737 102 + 0.176471
NA SAR11_0871 possible transmembrane proteinchromosome CDS840528 138 - 0.289855
NA SAR11_1032 Chorismate mutase IIchromosome CDS1008265 291 + 0.202749
NA SAR11_0070 type IV pilus assembly protein PilWchromosome CDS85664 705 - 0.333333
NA SAR11_0794 Unknown proteinchromosome CDS767594 606 + 0.40099
NA SAR11_0989 unknownchromosome CDS971129 135 - 0.162963
NA SAR11_1341 Protein of unknown function (DUF1185)chromosome CDS1278489 588 + 0.357143
NA SAR11_1038 unknownchromosome CDS1010626 468 - 0.217949
NA SAR11_0870 Unknown proteinchromosome CDS839935 591 + 0.284264
NA SAR11_1050 unknownchromosome CDS1020465 642 - 0.327103
NA SAR11_0132 possible serine protease inhibitor sgtichromosome CDS139945 126 - 0.253968
NA SAR11_1309 unknownchromosome CDS1245330 402 + 0.313433
NA SAR11_1167 unknownchromosome CDS1121545 729 - 0.308642
NA SAR11_0746 Unknown proteinchromosome CDS728783 171 + 0.292398
NA SAR11_0548 unknown membrane proteinchromosome CDS540307 1350 - 0.235556
NA SAR11_0965 unknown proteinchromosome CDS949040 399 + 0.308271
NA SAR11_0876 possible transmembrane proteinchromosome CDS842603 177 - 0.282486
NA SAR11_0046 Outer membrane autotransporterchromosome CDS55701 2019 - 0.309559
NA SAR11_0788 possible transmembrane proteinchromosome CDS763730 210 - 0.352381
NA SAR11_0312 potential Sulfotransferase domainchromosome CDS308772 846 + 0.228132
NA SAR11_1249 unknownchromosome CDS1189957 219 + 0.319635
NA SAR11_0072 Putative pilV-like pilin proteinchromosome CDS87366 651 - 0.299539
NA SAR11_0520 hypothetical proteinchromosome CDS509250 477 + 0.297694
NA SAR11_0468 Bacterial ribonuclease P proteinchromosome CDS461031 345 - 0.231884
NA SAR11_1278 unknownchromosome CDS1212015 441 + 0.285714
NA SAR11_0163 Unknown proteinchromosome CDS166322 114 + 0.236842
NA SAR11_0544 unknown membrane proteinchromosome CDS537702 462 + 0.151515
NA SAR11_1268 unknownchromosome CDS1204277 612 - 0.295752
NA SAR11_1299 unknown membrane proteinchromosome CDS1233832 549 - 0.269581
NA SAR11_0875 Unknown proteinchromosome CDS842388 138 + 0.231884
NA SAR11_0523 glucose-6-phosphate isomerase-like proteinchromosome CDS516442 534 + 0.230337
NA SAR11_0825 possible transmembrane proteinchromosome CDS796924 147 - 0.210884
NA SAR11_1363 conserved hypothetical proteinchromosome CDS1297756 297 + 0.313131
NA SAR11_0262 possible transmembrane proteinchromosome CDS263611 180 - 0.327778
NA SAR11_1279 unknown membrane proteinchromosome CDS1212445 312 - 0.285256
NA SAR11_0524 Unknown proteinchromosome CDS516956 447 + 0.223714
NA SAR11_1294 Uncharacterized protein family UPF015chromosome CDS1227911 195 - 0.251282
NA SAR11_0547 D amino acid oxidase (DAO) familychromosome CDS539250 990 - 0.209091
NA SAR11_1355 Protein of unknown function (DUF423)chromosome CDS1291124 324 - 0.296296
NA SAR11_0123 possible transmembrane proteinchromosome CDS132834 939 + 0.219382
NA SAR11_1725 unknownchromosome CDS405365 171 + 0.333333
NA SAR11_0936 Fimbrial protein pilinchromosome CDS921991 573 + 0.354276
NA SAR11_0714 Predicted permease YjgP/YjgQ family proteinchromosome CDS697671 1074 - 0.21229
NA SAR11_0293 conserved hypothetical proteinchromosome CDS292818 507 + 0.311637
NA SAR11_0356 conserved hypothetical proteinchromosome CDS348228 465 - 0.236559
NA SAR11_0454 Unknown proteinchromosome CDS449810 177 + 0.254237
NA SAR11_0839 possible transmembrane proteinchromosome CDS808285 135 + 0.251852
NA SAR11_1312 unknown membrane proteinchromosome CDS1247554 153 + 0.294118
NA SAR11_1276 unknownchromosome CDS1210949 279 + 0.326165
NA SAR11_0930 possible transmembrane proteinchromosome CDS895457 246 - 0.321138
NA SAR11_1254 unknownchromosome CDS1196013 480 - 0.329167
NA SAR11_0172 Unknown proteinchromosome CDS175765 348 + 0.232759
NA SAR11_1006 unknownchromosome CDS985615 513 - 0.259259
NA SAR11_0496 unknown proteinchromosome CDS484450 585 - 0.25641
NA SAR11_1311 unknown membrane proteinchromosome CDS1247269 225 + 0.395556
NA SAR11_0156 Unknown proteinchromosome CDS158728 339 - 0.262537
NA SAR11_0414 Unknown proteinchromosome CDS403276 117 - 0.264957
NA SAR11_0052 Unknown proteinchromosome CDS65036 291 - 0.281787
NA SAR11_1084 unknownchromosome CDS1051523 303 + 0.240924
NA SAR11_0290 conserved hypothetical proteinchromosome CDS290618 345 + 0.252174
NA SAR11_0401 Conserved hypothetical proteinchromosome CDS391509 594 + 0.29798
NA SAR11_0631 unknown proteinchromosome CDS618356 201 + 0.283582
NA SAR11_0144 conserved hypothetical proteinchromosome CDS149454 405 - 0.298765
NA SAR11_1189 unknownchromosome CDS1140964 294 - 0.333333
NA SAR11_0359 putative porinchromosome CDS352028 990 + 0.385859
NA SAR11_1220 unknownchromosome CDS1166737 228 - 0.236842
NA SAR11_1170 unknownchromosome CDS1123935 186 - 0.241935
NA SAR11_1239 unknownchromosome CDS1182072 294 - 0.326531
NA SAR11_0838 Unknown proteinchromosome CDS807867 351 + 0.336182
NA SAR11_0259 Unknown proteinchromosome CDS262083 564 - 0.235816
NA SAR11_0542 unknown membrane proteinchromosome CDS535581 1689 - 0.177028
NA SAR11_0069 possible pilX-type proteinchromosome CDS85064 525 - 0.308571
NA SAR11_0482 conserved hypothetical proteinchromosome CDS471726 645 + 0.327132
NA SAR11_0810 Unknown proteinchromosome CDS785951 516 + 0.286822
NA SAR11_1157 probable methyltransferasechromosome CDS1111980 627 - 0.295056
NA SAR11_0297 Phosphate-starvation-inducible Echromosome CDS295653 381 + 0.296588
NA SAR11_0963 unknown proteinchromosome CDS948344 222 - 0.265766
NA SAR11_0673 hypothetical proteinchromosome CDS657505 549 + 0.307832
NA SAR11_0751 conserved hypothetical proteinchromosome CDS732939 591 - 0.247039
NA SAR11_1168 unknownchromosome CDS1122281 354 - 0.40678
NA SAR11_0691 hypothetical proteinchromosome CDS675167 933 - 0.316184
aprM SAR11_0835 adenylylsulfate reductase membrane anchorchromosome CDS804704 795 + 0.339623
crtY SAR11_0122 lycopene cyclasechromosome CDS131813 1032 + 0.255814
ftsL SAR11_0030 cell division protein FtsLchromosome CDS35504 309 - 0.223301
gab SAR11_1354 gab proteinchromosome CDS1290213 912 - 0.289474
moaD SAR11_0761 probable molybdopterin biosynthesis protein moaDchromosome CDS739247 270 - 0.248148
mreD SAR11_1371 rod shape-determining protein MreDchromosome CDS1304922 522 - 0.199234
pilA SAR11_0054 Pilin (bacterial filament)chromosome CDS65846 486 - 0.376543
pilP SAR11_0061 type 4 fimbrial biogenesis protein PilPchromosome CDS72054 507 - 0.278107
rpl6e SAR11_1732 ribosomal protein L6echromosome CDS1238765 351 + 0.304843
ruvC SAR11_0593 crossover junction endodeoxyribonucleasechromosome CDS579588 495 + 0.292929
tolA SAR11_0596 TolA proteinchromosome CDS581234 810 + 0.307407
wbbA SAR11_0820 putative rhamnosyltransferasechromosome CDS793837 1020 - 0.223529
ytoQ SAR11_0079 hypothetical protein ytoQchromosome CDS93511 450 - 0.324444