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2024-05-03 10:29:52

Gene list

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Genomic element: pTP6

Number of genes found: 183

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
uncultured bacterium
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pTP6 repeat_unit18 20 + 0.65
NA pTP6 protein_bind6447 13 + 0.384615
NA pTP6 repeat_region54325 20 + 0.55
NA pTP6 operon32956 978 - 0.556237
NA pTP6 -10_signal52628 6 - 0.5
NA pTP6 -10_signal4759 6 - 0.166667
NA pTP6 -10_signal52540 6 - 0.333333
NA pTP6 -10_signal52524 6 - 0.166667
NA pTP6 protein_bind9771 15 - 0.6
NA pTP6 -35_signal12851 6 + 0.666667
NA pTP6 terminator40307 31 - 0.612903
NA pTP6 -35_signal12427 6 + 0.166667
NA pTP6 protein_bind9966 15 - 0.666667
NA pTP6 protein_bind9726 15 - 0.666667
NA pTP6 repeat_unit10324 20 + 0.6
NA pTP6 protein_bind4792 13 + 0.384615
NA pTP6 repeat_region27953 12076 + 0.598294
NA pTP6 repeat_unit40081 20 + 0.55
NA pTP6 operon52607 1701 + 0.634921
NA pTP6 protein_bind9703 15 - 0.6
NA pTP6 protein_bind20891 13 + 0.384615
NA pTP6 repeat_unit7059 20 + 0.55
NA pTP6 -10_signal8486 6 -
NA pTP6 repeat_unit26355 20 + 0.6
NA pTP6 protein_bind9987 15 - 0.6
NA pTP6 repeat_unit10459 20 + 0.7
NA pTP6 protein_bind9931 15 - 0.6
NA pTP6 -35_signal33939 6 + 0.333333
NA pTP6 protein_bind10257 15 - 0.533333
NA pTP6 -35_signal8545 6 + 0.5
NA pTP6 stem_loop52459 40 + 0.5
NA pTP6 misc_feature52506 2 + 1
NA pTP6 operon49721 2936 - 0.658379
NA pTP6 -35_signal12199 6 - 0.5
NA pTP6 protein_bind24876 13 + 0.384615
NA pTP6 repeat_unit10402 20 + 0.65
NA pTP6 -35_signal2459 6 - 0.5
NA pTP6 -10_signal52630 6 + 0.166667
NA pTP6 protein_bind12867 14 + 0.357143
NA pTP6 repeat_unit40126 20 + 0.6
NA pTP6 protein_bind2484 13 + 0.384615
NA pTP6 -35_signal4782 6 - 0.5
NA pTP6 repeat_unit40274 20 + 0.65
NA pTP6 protein_bind8490 17 + 0.352941
NA pTP6 protein_bind834 13 + 0.384615
NA pTP6 protein_bind24017 15 + 0.666667
NA pTP6 -10_signal12451 6 + 0.166667
NA pTP6 -35_signal52607 6 + 0.5
NA pTP6 protein_bind9199 15 + 0.6
NA pTP6 protein_bind2417 42 + 0.380952
NA pTP6 repeat_unit26311 20 + 0.65
NA pTP6 operon4800 1598 - 0.649562
NA pTP6 -10_signal33964 6 + 0.333333
NA pTP6 -35_signal52564 6 - 0.666667
NA pTP6 repeat_unit7128 20 + 0.65
NA pTP6 -10_signal12176 6 - 0.166667
NA pTP6 operon40307 9644 - 0.675653
NA pTP6 -10_signal49922 6 - 0.166667
NA pTP6 operon35403 4483 - 0.63752
NA pTP6 -10_signal28536 6 + 0.333333
NA pTP6 protein_bind9748 15 - 0.6
NA pTP6 protein_bind8520 10 + 0.2
NA pTP6 repeat_unit27953 25 - 0.52
NA pTP6 repeat_unit40220 20 + 0.6
NA pTP6 -35_signal28511 6 + 0.333333
NA pTP6 protein_bind9794 15 - 0.6
NA pTP6 protein_bind8531 13 + 0.384615
NA pTP6 -35_signal49945 6 - 0.333333
NA pTP6 protein_bind7999 15 - 0.6
NA pTP6 operon10485 1720 - 0.642442
NA pTP6 protein_bind47527 13 + 0.384615
NA pTP6 protein_bind51979 13 + 0.384615
NA pTP6 protein_bind28516 18 + 0.5
NA pTP6 -35_signal52651 6 - 0.5
NA pTP6 repeat_unit40161 20 + 0.6
NA pTP6 -35_signal8510 6 - 0.333333
NA pTP6 repeat_unit53 20 + 0.55
NA pTP6 repeat_unit54297 20 + 0.6
NA pTP6 -10_signal6368 6 -
NA pTP6 -10_signal2436 6 - 0.333333
NA pTP6 operon6476 2040 - 0.688235
NA pTP6 operon2505 2283 - 0.65265
NA pTP6 -35_signal6392 6 - 0.333333
NA pTP6 protein_bind4761 10 + 0.2
NA pTP6 oriT52501 7 + 0.571429
NA pTP6 terminator135 33 + 0.575758
NA pTP6 protein_bind12209 13 + 0.384615
NA pTP6 protein_bind12178 10 + 0.2
NA pTP6 protein_bind8568 14 + 0.357143
NA pTP6 repeat_unit7100 20 + 0.55
NA pTP6 repeat_unit10356 20 + 0.55
NA pTP6 protein_bind6372 17 + 0.352941
NA pTP6 protein_bind52600 14 + 0.428571
NA pTP6 terminator10485 29 - 0.586207
NA pTP6 repeat_unit10284 20 + 0.6
NA pTP6 protein_bind2469 10 + 0.3
NA pTP6 -10_signal8568 6 + 0.333333
NA pTP6 protein_bind33944 18 + 0.5
NA pTP6 repeat_unit40004 25 + 0.52
NA pTP6 operon12427 14658 + 0.655274
NA pTP6 operon33939 1412 + 0.602691
NA pTP6 -35_signal52548 6 - 0.5
NA pTP6 protein_bind49938 14 + 0.357143
NA pTP6 operon166 2299 - 0.68508
NA pTP6 -10_signal12874 6 + 0.333333
NA pTP6 protein_bind49919 14 + 0.571429
NA pTP6 repeat_unit7013 20 + 0.65
NA pTP6 operon8545 641 + 0.650546
NA pTP6 protein_bind6402 10 + 0.2
NA pTP6 repeat_unit109 20 + 0.6
NA pTP6 protein_bind12682 13 + 0.384615
NA pTP6 operon28511 4011 + 0.575168
incC1 IncC1 partitioning proteinpTP6 CDS3623 1077 - 0.638812
incC2 IncC2 partitioning proteinpTP6 CDS3623 765 - 0.644444
kfrA KfrA coiled-coil proteinpTP6 CDS1366 1032 - 0.749031
kfrB KfrB proteinpTP6 CDS848 348 - 0.583333
kfrC KfrC proteinpTP6 CDS166 654 - 0.69419
klcA KlcA proteinpTP6 CDS8007 429 - 0.685315
klcB KlcB proteinpTP6 CDS6750 1206 - 0.697347
kleA KleA proteinpTP6 CDS6080 237 - 0.64135
kleB KleB proteinpTP6 CDS5806 216 - 0.625
kleE KleE proteinpTP6 CDS5332 387 - 0.633075
kleF KleF proteinpTP6 CDS4800 531 - 0.685499
kluA hypothetical proteinpTP6 CDS8604 270 + 0.666667
kluB hypothetical proteinpTP6 CDS8870 315 + 0.653968
korA KorA repressor proteinpTP6 CDS4384 303 - 0.623762
korB KorB repressor and partitioning proteinpTP6 CDS2577 1050 - 0.672381
korB pTP6 terminator2505 28 - 0.607143
korC KorC repressor proteinpTP6 CDS6476 258 - 0.697674
mehS hypothetical proteinpTP6 CDS32956 459 - 0.498911
merA MerA proteinpTP6 CDS29404 1710 + 0.594737
merB-1 MerB-1 proteinpTP6 CDS31883 639 + 0.539906
merB-2 MerB-2b proteinpTP6 CDS34002 639 + 0.57277
merD MerD proteinpTP6 CDS34752 366 + 0.674863
merE MerE proteinpTP6 CDS35114 237 + 0.632911
merG MerG proteinpTP6 CDS31149 654 + 0.567278
merP MerP proteinpTP6 CDS28941 276 + 0.572464
merR-1 MerR-1 proteinpTP6 CDS28071 435 - 0.611494
merR-1 pTP6 -35_signal28559 6 - 0.166667
merR-2 MerR-2 proteinpTP6 CDS33499 435 - 0.609195
merT MerT proteinpTP6 CDS28577 351 + 0.612536
parA ParA resolvasepTP6 CDS27086 660 - 0.687879
ssb SSB single stranded DNA binding proteinpTP6 CDS11803 342 - 0.596491
tniA TniA proteinpTP6 CDS38203 1683 - 0.64587
tniB TniB proteinpTP6 CDS37292 909 - 0.644664
tniQ TniQ proteinpTP6 CDS36078 1218 - 0.622332
tniR TniR proteinpTP6 CDS35403 615 - 0.64878
traC2 TraC2 proteinpTP6 CDS40442 4347 - 0.68645
traC3 TraC3 proteinpTP6 CDS40442 3693 - 0.686705
traC4 TraC4 proteinpTP6 CDS40442 2244 - 0.702317
traD TraD proteinpTP6 CDS44792 390 - 0.725641
traE TraE proteinpTP6 CDS45203 2064 - 0.671996
traF TraF proteinpTP6 CDS47278 537 - 0.662942
traG TraG proteinpTP6 CDS47811 1914 - 0.661442
traH TraH proteinpTP6 CDS50023 393 - 0.676845
traI TraI DNA relaxasepTP6 CDS49721 2241 - 0.668452
traJ TraJ proteinpTP6 CDS51996 375 - 0.669333
traK TraK proteinpTP6 CDS52744 399 + 0.631579
traL TraL proteinpTP6 CDS53142 726 + 0.629477
traM TraM proteinpTP6 CDS53867 441 + 0.675737
traX TraX proteinpTP6 CDS51958 42 - 0.547619
trbA TrbA repressor proteinpTP6 CDS12258 363 + 0.589532
trbA pTP6 -35_signal12085 6 + 0.666667
trbA pTP6 -10_signal12108 6 + 0.166667
trbB TrbB proteinpTP6 CDS12930 963 + 0.619938
trbC TrbC proteinpTP6 CDS13909 465 + 0.668817
trbD TrbD proteinpTP6 CDS14377 312 + 0.63141
trbE TrbE proteinpTP6 CDS14685 2559 + 0.639312
trbF TrbF proteinpTP6 CDS17240 783 + 0.659004
trbG TrbG proteinpTP6 CDS18019 921 + 0.639522
trbH TrbH proteinpTP6 CDS18942 489 + 0.705521
trbI TrbI proteinpTP6 CDS19435 1422 + 0.673699
trbJ TrbJ proteinpTP6 CDS20877 765 + 0.60915
trbK TrbK entry exclusion proteinpTP6 CDS21651 228 + 0.622807
trbL TrbL proteinpTP6 CDS21889 1719 + 0.683537
trbM TrbM proteinpTP6 CDS23625 588 + 0.671769
trbN TrbN proteinpTP6 CDS24226 636 + 0.690252
trbO TrbO proteinpTP6 CDS24890 267 + 0.632959
trbP TrbP proteinpTP6 CDS25156 699 + 0.682403
trfA1 long form TrfA replication proteinpTP6 CDS10536 1221 - 0.657658
trfA2 short form TrfA replication proteinpTP6 CDS10536 855 - 0.636257
upf30.5 Upf30.5 proteinpTP6 CDS25870 432 + 0.659722
upf31.0 Upf31.0 putative adenine methylasepTP6 CDS26410 675 + 0.660741