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2024-05-03 17:37:40

Gene list

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Genomic element: pXCV183

Number of genes found: 195

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas campestris pv. vesicatoria, 85-10
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XCVd0095 cointegrate resolution protein S fragmentpXCV183 CDS104170 204 + 0.671569
NA XCVd0032 putative secreted proteinpXCV183 CDS38145 615 + 0.56748
NA XCVd0110 conserved hypothetical proteinpXCV183 CDS118855 240 + 0.608333
NA XCVd0132 pXCV183 sig_peptide140849 63 + 0.603175
NA XCVd0023 hypothetical proteinpXCV183 CDS27131 234 + 0.559829
NA XCVd0149 hypothetical proteinpXCV183 CDS155461 297 - 0.59596
NA XCVd0085 conserved hypothetical proteinpXCV183 CDS94208 483 - 0.604555
NA XCVd0021 IS1646 transposasepXCV183 CDS24444 981 + 0.623853
NA XCVd0098 putative replication protein ApXCV183 CDS108441 1227 - 0.586797
NA XCVd0061 hypothetical proteinpXCV183 CDS69689 2949 - 0.63547
NA XCVd0040 putative lytic murein transglycosylasepXCV183 CDS45302 684 + 0.614035
NA XCVd0068 hypothetical proteinpXCV183 CDS75217 306 - 0.637255
NA XCVd0108 ISxac2 transposasepXCV183 CDS116915 798 + 0.635338
NA XCVd0140 hypothetical proteinpXCV183 CDS147335 396 - 0.60101
NA XCVd0093 putative secreted proteinpXCV183 CDS101887 1038 + 0.580925
NA XCVd0030 pXCV183 sig_peptide36182 141 + 0.588652
NA XCVd0151 hypothetical proteinpXCV183 CDS156843 138 + 0.586957
NA XCVd0073 conserved hypothetical proteinpXCV183 CDS80410 1386 + 0.628427
NA XCVd0087 hypothetical proteinpXCV183 CDS96358 2103 + 0.563956
NA XCVd0083 UBA/ThiF-type NAD/FAD binding fold containing proteinpXCV183 CDS92165 1359 + 0.693893
NA XCVd0060 hypothetical proteinpXCV183 CDS69321 348 - 0.566092
NA XCVd0118 hypothetical proteinpXCV183 CDS129663 774 + 0.596899
NA XCVd0141 DNA helicasepXCV183 CDS147733 2028 - 0.627712
NA IS_1646_pXCV183_1 pXCV183 misc_feature24375 1164 + 0.617698
NA XCVd0057 putative membrane proteinpXCV183 CDS67737 192 - 0.541667
NA XCVd0082 hypothetical proteinpXCV183 CDS91677 492 + 0.680894
NA XCVd0077 putative transcriptional regulator, LuxR familypXCV183 CDS85900 789 + 0.628644
NA XCVd0088 hypothetical proteinpXCV183 CDS98677 153 + 0.601307
NA XCVd0025 ISxac3 transposase (fragment)pXCV183 CDS28387 294 - 0.615646
NA XCVd0139 conserved hypothetical proteinpXCV183 CDS146321 993 + 0.615307
NA XCVd0136 hypothetical proteinpXCV183 CDS143837 174 + 0.609195
NA XCVd0172 putative replication proteinpXCV183 CDS181061 1311 - 0.572082
NA XCVd0018 hypothetical proteinpXCV183 CDS22121 351 + 0.564103
NA XCVd0154 hypothetical proteinpXCV183 CDS159704 339 - 0.637168
NA XCVd0042 putative membrane proteinpXCV183 CDS47114 780 + 0.641026
NA XCVd0029 pXCV183 sig_peptide35682 69 + 0.608696
NA XCVd0122 putative integrase-like proteinpXCV183 CDS132385 1221 + 0.60688
NA XCVd0035 hypothetical proteinpXCV183 CDS41128 237 + 0.662447
NA IS_Xac2_pXCV183_1 pXCV183 misc_feature116585 1089 + 0.635445
NA IS_1477_pXCV183_1 pXCV183 misc_feature99590 1226 + 0.619086
NA XCVd0121 conserved hypothetical proteinpXCV183 CDS131923 441 + 0.623583
NA XCVd0078 hypothetical proteinpXCV183 CDS86685 624 + 0.668269
NA XCVd0156 hypothetical proteinpXCV183 CDS165376 1257 - 0.636436
NA XCVd0072 conserved hypothetical proteinpXCV183 CDS78912 1458 + 0.620713
NA XCVd0036 putative DNA topoisomerasepXCV183 CDS41367 1557 + 0.626204
NA XCVd0145 pXCV183 sig_peptide153446 60 - 0.666667
NA XCVd0115 Tn5044 transposasepXCV183 CDS124208 2961 + 0.624114
NA XCVd0123 hypothetical proteinpXCV183 CDS133673 396 + 0.565657
NA XCVd0150 conserved hypothetical proteinpXCV183 CDS156028 741 - 0.592443
NA XCVd0147 hypothetical proteinpXCV183 CDS153900 798 - 0.640351
NA XCVd0051 hypothetical proteinpXCV183 CDS57295 987 + 0.60385
NA XCVd0135 hypothetical proteinpXCV183 CDS143593 243 + 0.609053
NA XCVd0044 pXCV183 sig_peptide50461 105 + 0.590476
NA XCVd0076 conserved hypothetical proteinpXCV183 CDS85510 252 + 0.710317
NA XCVd0092 cointegrate resolution protein T (fragment)pXCV183 CDS100891 762 - 0.65748
NA XCVd0148 hypothetical proteinpXCV183 CDS154705 342 - 0.628655
NA XCVd0037 hypothetical proteinpXCV183 CDS43329 426 + 0.591549
NA XCVd0138 hypothetical proteinpXCV183 CDS145224 687 - 0.586608
NA XCVd0114 putative cointegrate resolution protein SpXCV183 CDS123354 846 + 0.686761
NA XCVd0132 putative secreted proteinpXCV183 CDS140849 579 + 0.637306
NA XCVd0062 hypothetical proteinpXCV183 CDS72647 225 - 0.6
NA XCVd0047 putative antirestriction proteinpXCV183 CDS52552 1086 + 0.610497
NA XCVd0031 putative secreted proteinpXCV183 CDS37318 831 + 0.572804
NA XCVd0089 conserved hypothetical proteinpXCV183 CDS98928 612 - 0.602941
NA XCVd0131 putative adenine-specific DNA methyltransferasepXCV183 CDS140015 819 + 0.634921
NA XCVd0024 ISxac3 transposasepXCV183 CDS27503 819 - 0.60928
NA XCVd0019 conserved hypothetical proteinpXCV183 CDS22586 510 + 0.558824
NA XCVd0171 hypothetical proteinpXCV183 CDS180223 522 - 0.601533
NA XCVd0124 hypothetical proteinpXCV183 CDS134115 1026 + 0.589669
NA XCVd0033 pXCV183 sig_peptide38840 48 + 0.666667
NA IS_1479_pXCV183_1 pXCV183 misc_feature29333 1158 - 0.618307
NA XCVd0160 hypothetical proteinpXCV183 CDS168678 573 - 0.614311
NA XCVd0096 putative cointegrate resolution protein SpXCV183 CDS104425 714 + 0.682073
NA XCVd0159 hypothetical proteinpXCV183 CDS168022 660 - 0.601515
NA XCVd0028 hypothetical proteinpXCV183 CDS35189 504 + 0.619048
NA XCVd0022 IS1404 transposasepXCV183 CDS25939 1026 - 0.611111
NA XCVd0054 putative DNA helicasepXCV183 CDS62667 1506 - 0.559097
NA XCVd0033 putative family M23 peptidase precursorpXCV183 CDS38840 918 + 0.638344
NA XCVd0153 hypothetical proteinpXCV183 CDS159287 399 + 0.609023
NA XCVd0101 conserved hypothetical proteinpXCV183 CDS111429 402 - 0.547264
NA XCVd0045 pXCV183 sig_peptide51069 75 + 0.546667
NA XCVd0130 hypothetical proteinpXCV183 CDS139391 378 + 0.637566
NA XCVd0128 histone-like family DNA-binding proteinpXCV183 CDS138454 300 - 0.59
NA XCVd0046 hypothetical proteinpXCV183 CDS51901 444 + 0.56982
NA XCVd0065 hypothetical proteinpXCV183 CDS74216 477 - 0.607966
NA XCVd0059 hypothetical proteinpXCV183 CDS69109 213 - 0.544601
NA XCVd0066 hypothetical proteinpXCV183 CDS74679 231 - 0.662338
NA XCVd0144 hypothetical proteinpXCV183 CDS151384 645 - 0.581395
NA XCVd0146 hypothetical proteinpXCV183 CDS153499 405 - 0.637037
NA XCVd0052 hypothetical proteinpXCV183 CDS58342 2904 + 0.599518
NA XCVd0079 UvrD/Rep-family ATP-dependent DNA helicasepXCV183 CDS87305 3312 + 0.666365
NA XCVd0084 putative membrane proteinpXCV183 CDS93531 540 + 0.635185
NA XCVd0075 conserved hypothetical proteinpXCV183 CDS83244 2199 + 0.692133
NA XCVd0049 DnaB-like helicasepXCV183 CDS54745 1386 + 0.576479
NA IS_1404_pXCV183_1 pXCV183 misc_feature25907 1203 - 0.608479
NA XCVd0158 hypothetical proteinpXCV183 CDS167159 804 - 0.621891
NA XCVd0119 hypothetical proteinpXCV183 CDS130456 471 + 0.617834
NA XCVd0111 conserved hypothetical proteinpXCV183 CDS119094 420 + 0.62381
NA XCVd0056 conserved hypothetical proteinpXCV183 CDS66395 867 - 0.621684
NA XCVd0094 cointegrate resolution protein T (fragment)pXCV183 CDS102912 1068 - 0.668539
NA XCVd0117 hypothetical proteinpXCV183 CDS129011 270 + 0.540741
NA XCVd0145 putative cytosine-specific DNA methyltransferasepXCV183 CDS152000 1506 - 0.614874
NA XCVd0105 putative tyrosine phosphatasepXCV183 CDS114543 1071 - 0.493931
NA XCVd0116 hypothetical proteinpXCV183 CDS127474 1311 + 0.675057
NA XCVd0058 conserved hypothetical proteinpXCV183 CDS68066 1044 - 0.58908
NA XCVd0026 IS1479 transposasepXCV183 CDS29447 981 - 0.623853
NA XCVd0070 putative cointegrate resolution protein TpXCV183 CDS76556 942 - 0.611465
NA XCVd0157 hypothetical proteinpXCV183 CDS166833 330 - 0.648485
NA XCVd0053 hypothetical proteinpXCV183 CDS61211 960 + 0.619792
NA XCVd0100 putative epsilon antitoxin of the postsegregational killing systempXCV183 CDS111141 264 - 0.594697
NA XCVd0063 hypothetical proteinpXCV183 CDS72868 399 - 0.619048
NA XCVd0163 hypothetical proteinpXCV183 CDS172923 1245 - 0.599197
NA XCVd0010 hypothetical proteinpXCV183 CDS10265 534 + 0.61985
NA XCVd0081 hypothetical proteinpXCV183 CDS91226 471 + 0.704883
NA XCVd0020 hypothetical proteinpXCV183 CDS23205 519 - 0.541426
NA XCVd0113 conserved hypothetical proteinpXCV183 CDS122512 699 + 0.533619
NA XCVd0031 pXCV183 sig_peptide37318 69 + 0.536232
NA XCVd0039 putative membrane proteinpXCV183 CDS44808 498 + 0.630522
NA XCVd0064 hypothetical proteinpXCV183 CDS73687 450 - 0.615556
NA XCVd0048 hypothetical proteinpXCV183 CDS53668 792 + 0.57702
NA XCVd0099 putative Zeta toxin of the postsegregational killing systempXCV183 CDS109947 1188 - 0.619529
NA XCVd0030 putative secreted proteinpXCV183 CDS36182 1137 + 0.586631
NA XCVd0091 IS1477 transposasepXCV183 CDS99953 834 + 0.629496
NA XCVd0106 putative resolvasepXCV183 CDS115889 459 - 0.572985
NA XCVd0044 putative secreted proteinpXCV183 CDS50461 621 + 0.58132
NA XCVd0142 hypothetical proteinpXCV183 CDS149763 621 - 0.658615
NA XCVd0004 hypothetical proteinpXCV183 CDS4890 1455 - 0.615808
NA XCVd0165 putative membrane proteinpXCV183 CDS174921 405 - 0.595062
NA XCVd0090 IS1477 transposase fragmentpXCV183 CDS99654 267 + 0.588015
NA XCVd0126 putative membrane-associated acetyltransferasepXCV183 CDS136408 1089 - 0.588613
NA XCVd0102 conserved hypothetical proteinpXCV183 CDS111827 261 - 0.570881
NA XCVd0143 hypothetical proteinpXCV183 CDS150380 1008 - 0.609127
NA XCVd0029 putative secreted proteinpXCV183 CDS35682 501 + 0.546906
NA XCVd0034 hypothetical proteinpXCV183 CDS39827 1305 + 0.666667
NA XCVd0080 hypothetical proteinpXCV183 CDS90720 507 + 0.678501
NA XCVd0120 putative membrane proteinpXCV183 CDS130923 891 + 0.564534
NA XCVd0055 hypothetical proteinpXCV183 CDS65905 462 - 0.530303
NA XCVd0071 phage integrase family proteinpXCV183 CDS77603 1086 + 0.691529
NA XCVd0045 putative periplasmic thiol:disulfide interchange proteinpXCV183 CDS51069 789 + 0.575412
NA XCVd0133 putative site-specific DNA-methyltransferasepXCV183 CDS141441 1224 + 0.642157
NA XCVd0093 pXCV183 sig_peptide101887 75 + 0.52
NA XCVd0067 hypothetical proteinpXCV183 CDS74906 315 - 0.711111
NA XCVd0125 hypothetical proteinpXCV183 CDS135638 726 + 0.567493
NA XCVd0032 pXCV183 sig_peptide38145 72 + 0.555556
NA XCVd0086 hypothetical proteinpXCV183 CDS94907 1152 + 0.557292
NA XCVd0069 hypothetical proteinpXCV183 CDS76136 273 - 0.604396
NA XCVd0107 ISxac2 transposase (fragment)pXCV183 CDS116655 267 + 0.629214
NA XCVd0050 hypothetical proteinpXCV183 CDS56639 654 + 0.553517
NA XCVd0161 putative secreted proteinpXCV183 CDS169241 357 - 0.635854
NA XCVd0074 putative sigma-54-dependent transcriptional regulatorpXCV183 CDS82142 1092 + 0.679487
NA XCVd0103 Site-specific recombinasepXCV183 CDS112277 567 + 0.671958
NA XCVd0038 hypothetical proteinpXCV183 CDS43756 1056 + 0.631629
NA XCVd0155 conserved hypothetical proteinpXCV183 CDS160051 5259 - 0.609622
NA IS_Xac3_pXCV183_1 pXCV183 misc_feature27443 1297 - 0.606014
NA XCVd0009 putative membrane proteinpXCV183 CDS9367 432 + 0.569444
avrBs1 XCVd0104 avirulence protein AvrBs1pXCV183 CDS113115 1338 - 0.422272
csrA2 XCVd0127 carbon storage regulatorpXCV183 CDS137795 285 - 0.607018
dotA XCVd0027 putative TraY/DotA-like type IV secretion system proteinpXCV183 CDS32545 2583 - 0.56717
dotB XCVd0007 putative DotB-like type IV secretion system proteinpXCV183 CDS7844 1197 + 0.618212
dotC XCVd0006 putative DotC-like type IV secretion system proteinpXCV183 CDS7068 780 + 0.602564
dotD XCVd0005 pXCV183 sig_peptide6587 75 + 0.666667
dotD XCVd0005 putative DotD-like type IV secretion system proteinpXCV183 CDS6587 495 + 0.654545
dsbC XCVd0137 pXCV183 sig_peptide144018 54 + 0.648148
dsbC XCVd0137 thiol:disulfide interchange proteinpXCV183 CDS144018 753 + 0.646746
icmB XCVd0162 putative IcmB-like type IV secretion system proteinpXCV183 CDS169614 3048 - 0.595472
icmC XCVd0166 putative IcmC-like type IV secretion system proteinpXCV183 CDS175361 531 - 0.559322
icmE XCVd0168 putative IcmE-like type IV secretion system proteinpXCV183 CDS176852 1248 - 0.612981
icmG XCVd0167 putative IcmG-like type IV secretion system proteinpXCV183 CDS175901 822 - 0.653285
icmJ XCVd0164 putative IcmJ-like type IV secretion system proteinpXCV183 CDS174157 753 - 0.61753
icmK XCVd0169 putative IcmK-like type IV secretion system proteinpXCV183 CDS178096 942 - 0.631635
icmK XCVd0169 pXCV183 sig_peptide178975 63 - 0.68254
icmL XCVd0170 putative IcmL-like type IV secretion system proteinpXCV183 CDS179034 834 - 0.58753
icmO XCVd0043 putative IcmO-like type IV secretion system proteinpXCV183 CDS47904 2568 + 0.583333
icmP XCVd0041 putative IcmP-like type IV secretion system proteinpXCV183 CDS45982 1152 + 0.574653
icmT XCVd0008 putative IcmT-like type IV secretion system proteinpXCV183 CDS9037 282 + 0.609929
parB XCVd0003 Chromosome partitioning proteinpXCV183 CDS3543 882 - 0.637188
pilL XCVd0011 putative PilL-like lipoproteinpXCV183 CDS11295 840 + 0.572619
pilL XCVd0011 pXCV183 sig_peptide11295 66 + 0.530303
pilN XCVd0012 putative PilN-like Bacterial type II and III secretion system proteinpXCV183 CDS12131 1737 + 0.578008
pilN XCVd0012 pXCV183 sig_peptide12131 69 + 0.550725
pilO XCVd0013 putative PilO-like pilus assembly proteinpXCV183 CDS13907 1347 + 0.582777
pilQ XCVd0014 putative PilQ-like type II/IV secretion system proteinpXCV183 CDS15739 1611 + 0.554935
pilR XCVd0015 putative PilR-like integral membrane proteinpXCV183 CDS17351 1098 + 0.522769
pilT XCVd0016 putative PilT-like type II/IV secretion system proteinpXCV183 CDS18707 1320 + 0.549242
pilV XCVd0017 pXCV183 sig_peptide20023 111 + 0.540541
pilV XCVd0017 putative PilV-like type IV prepilinpXCV183 CDS20023 1488 + 0.552419
rdgC XCVd0134 recombination associated protein / putative exonucleasepXCV183 CDS142680 912 + 0.623904
repA XCVd0001 Replication protein ApXCV183 CDS456 1293 + 0.600155
repB XCVd0002 Replication protein BpXCV183 CDS1745 999 + 0.602603
ssb XCVd0129 Single-stranded DNA-binding proteinpXCV183 CDS138942 354 + 0.629943
tRNA-Ile XCVd_tRNA01 transfer RNA-IlepXCV183 tRNA31579 93 - 0.602151
tnpA XCVd0112 Tn5045 transposasepXCV183 CDS119518 2976 + 0.640457
tnpA XCVd0097 Tn5044 transposasepXCV183 CDS105147 2964 + 0.627868
tnpR XCVd0109 Tn5045 resolvasepXCV183 CDS117717 924 - 0.625541
traE XCVd0152 DNA topoisomerase TraEpXCV183 CDS156994 2187 - 0.607225