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2024-05-16 20:07:37

Gene list

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Genomic element: pSD25

Number of genes found: 133

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Ruegeria sp. PR1b, PR1b
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RC137SubName: Full=RC137; pSD25 CDS39909 399 + 0.496241
NA RC103SubName: Full=RC103; pSD25 CDS4085 375 - 0.626667
NA RC133SubName: Full=RC133; pSD25 CDS35625 372 + 0.629032
NA RC120SubName: Full=RC120; pSD25 CDS21639 597 - 0.609715
NA RC188SubName: Full=RC188; pSD25 CDS101293 594 - 0.636364
NA RC102SubName: Full=RC102; pSD25 CDS2515 1359 - 0.543046
NA RC177SubName: Full=RC177; pSD25 CDS90334 1059 - 0.634561
NA RC122SubName: Full=RC122; pSD25 CDS23997 1653 - 0.5366
NA RC108SubName: Full=RC108; pSD25 CDS9165 492 + 0.623984
NA RC197SubName: Full=RC197; pSD25 CDS113780 321 - 0.582555
NA RC128SubName: Full=RC128; pSD25 CDS31551 348 - 0.517241
NA RC110SubName: Full=RC110; pSD25 CDS11548 627 - 0.555024
NA RC125SubName: Full=RC125; pSD25 CDS27475 1695 - 0.532743
NA RC156SubName: Full=RC156; pSD25 CDS59701 2499 - 0.601441
NA RC145SubName: Full=RC145; pSD25 CDS47895 2127 - 0.622943
NA RC144SubName: Full=RC144; pSD25 CDS47468 564 - 0.602837
NA RC229SubName: Full=RC229; pSD25 CDS144643 1107 - 0.606143
NA RC135SubName: Full=RC135; pSD25 CDS38048 915 + 0.521311
NA RC217SubName: Full=RC217; pSD25 CDS131056 1500 + 0.592
NA RC185SubName: Full=RC185; pSD25 CDS99675 519 - 0.599229
NA RC220SubName: Full=RC220; pSD25 CDS134437 1323 + 0.613757
NA RC223SubName: Full=RC223; pSD25 CDS138182 984 + 0.610772
NA RC131SubName: Full=RC131; pSD25 CDS33867 345 - 0.547826
NA RC207SubName: Full=RC207; pSD25 CDS121480 759 + 0.661397
NA RC182SubName: Full=RC182; pSD25 CDS95522 537 - 0.588454
NA RC139SubName: Full=RC139; pSD25 CDS41021 1137 - 0.598945
NA RC123SubName: Full=RC123; pSD25 CDS26039 825 + 0.631515
NA RC195SubName: Full=RC195; pSD25 CDS111792 909 - 0.632563
NA RC107SubName: Full=RC107; pSD25 CDS8542 780 + 0.587179
NA RC113SubName: Full=RC113; pSD25 CDS16032 579 - 0.62867
NA RC222SubName: Full=RC222; pSD25 CDS137040 1179 + 0.606446
NA RC192SubName: Full=RC192; pSD25 CDS107989 1143 - 0.505687
NA RC136SubName: Full=RC136; pSD25 CDS38844 1002 + 0.538922
NA RC134SubName: Full=RC134; pSD25 CDS36035 1503 + 0.600798
NA RC191SubName: Full=RC191; pSD25 CDS106505 1248 + 0.584135
NA RC154SubName: Full=RC154; pSD25 CDS58634 456 - 0.563596
NA RC159SubName: Full=RC159; pSD25 CDS65115 912 - 0.550439
NA RC168SubName: Full=RC168; pSD25 CDS76429 1077 + 0.610956
NA RC111SubName: Full=RC111; pSD25 CDS13066 1179 - 0.631891
NA RC196SubName: Full=RC196; pSD25 CDS112863 759 - 0.623188
NA RC155SubName: Full=RC155; pSD25 CDS59086 522 - 0.559387
NA RC175SubName: Full=RC175; pSD25 CDS88736 981 - 0.648318
NA RC143SubName: Full=RC143; pSD25 CDS45587 1596 - 0.618421
NA RC161SubName: Full=RC161; pSD25 CDS67573 2391 + 0.627771
NA RC142SubName: Full=RC142; pSD25 CDS44594 963 - 0.602285
NA RC183SubName: Full=RC183; pSD25 CDS96214 672 - 0.622024
NA RC141SubName: Full=RC141; pSD25 CDS43080 906 - 0.5883
NA RC199SubName: Full=RC199; pSD25 CDS115092 1032 - 0.601744
NA RC121SubName: Full=RC121; pSD25 CDS22223 1788 + 0.532998
NA RC187SubName: Full=RC187; pSD25 CDS100640 654 - 0.62844
NA RC176SubName: Full=RC176; pSD25 CDS89749 567 - 0.645503
NA RC148SubName: Full=RC148; pSD25 CDS52100 930 + 0.565591
NA RC147SubName: Full=RC147; pSD25 CDS50639 1074 - 0.608007
NA RC157SubName: Full=RC157; pSD25 CDS62711 906 + 0.589404
NA RC181SubName: Full=RC181; pSD25 CDS94792 654 - 0.636086
NA RC163SubName: Full=RC163; pSD25 CDS71271 810 + 0.612346
NA RC206SubName: Full=RC206; pSD25 CDS120447 321 - 0.666667
NA RC198SubName: Full=RC198; pSD25 CDS114232 864 - 0.541667
NA RC216SubName: Full=RC216; pSD25 CDS130214 804 + 0.624378
NA RC178SubName: Full=RC178; pSD25 CDS90990 858 - 0.614219
NA RC167SubName: Full=RC167; pSD25 CDS74766 1050 + 0.611429
NA RC228SubName: Full=RC228; pSD25 CDS143818 333 - 0.624625
NA RC151SubName: Full=RC151; pSD25 CDS55263 945 - 0.604233
NA RC219SubName: Full=RC219; pSD25 CDS133617 696 - 0.587644
NA RC212SubName: Full=RC212; pSD25 CDS125595 1470 + 0.636054
NA RC149SubName: Full=RC149; pSD25 CDS52910 1218 - 0.587028
NA RC201SubName: Full=RC201; pSD25 CDS117114 1326 - 0.581448
NA branched-chain amino acid ABC transporterSubName: Full=Branched-chain amino acid ABC transporter; pSD25 CDS122235 405 + 0.644444
NA RC166SubName: Full=RC166; pSD25 CDS73379 1446 + 0.634163
NA RC204SubName: Full=RC204; pSD25 CDS120166 252 - 0.646825
NA RC112RecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; pSD25 CDS14337 603 - 0.603648
NA RC171SubName: Full=RC171; pSD25 CDS81395 978 + 0.534765
NA RC114SubName: Full=RC114; pSD25 CDS16780 915 + 0.662295
NA RC172SubName: Full=RC172; pSD25 CDS82508 2001 - 0.614693
NA RC152SubName: Full=RC152; pSD25 CDS56313 921 + 0.590662
NA RC162SubName: Full=RC162; pSD25 CDS70099 1173 + 0.632566
NA RC211SubName: Full=RC211; pSD25 CDS124222 465 - 0.574194
NA RC138SubName: Full=RC138; pSD25 CDS40587 432 - 0.571759
NA RC146SubName: Full=RC146; pSD25 CDS49918 690 - 0.555072
NA RC140SubName: Full=RC140; pSD25 CDS42240 618 + 0.567961
NA RC117SubName: Full=RC117; pSD25 CDS18458 450 + 0.615556
NA RC127SubName: Full=RC127; pSD25 CDS30465 933 + 0.649518
NA RC214SubName: Full=RC214; pSD25 CDS128250 1095 + 0.623744
NA RC231SubName: Full=RC231; pSD25 CDS146482 885 - 0.674576
NA RC203SubName: Full=RC203; pSD25 CDS119864 306 + 0.571895
NA RC153SubName: Full=RC153; pSD25 CDS57295 1194 - 0.605528
NA RC224SubName: Full=RC224; pSD25 CDS139162 804 + 0.616915
NA RC200SubName: Full=RC200; pSD25 CDS116120 1068 - 0.617041
NA RC179SubName: Full=RC179; pSD25 CDS92487 1320 + 0.685606
NA RC210SubName: Full=RC210; pSD25 CDS122951 1002 + 0.608782
NA RC225SubName: Full=RC225; pSD25 CDS140044 1227 - 0.601467
NA RC226SubName: Full=RC226; pSD25 CDS141466 687 - 0.586608
NA RC158SubName: Full=RC158; pSD25 CDS63854 792 + 0.59596
NA RC106SubName: Full=RC106; pSD25 CDS6706 1524 - 0.639764
NA RC169SubName: Full=RC169; pSD25 CDS77677 1257 + 0.536197
NA RC130SubName: Full=RC130; pSD25 CDS32892 972 + 0.556584
NA RC174SubName: Full=RC174; pSD25 CDS87840 1131 - 0.657825
NA RC193SubName: Full=RC193; pSD25 CDS109283 984 - 0.563008
NA RC202SubName: Full=RC202; pSD25 CDS118436 966 - 0.575569
NA RC180SubName: Full=RC180; pSD25 CDS93821 510 - 0.65098
NA RC186SubName: Full=RC186; pSD25 CDS100190 327 - 0.599388
NA RC100SubName: Full=RC100; pSD25 CDS1 1281 - 0.615144
NA RC126SubName: Full=RC126; pSD25 CDS29406 942 + 0.55414
NA RC213SubName: Full=RC213; pSD25 CDS127083 1056 + 0.601326
NA RC124SubName: Full=RC124; pSD25 CDS26936 453 + 0.644592
NA RC109SubName: Full=RC109; pSD25 CDS10686 777 + 0.521236
NA RC205SubName: Full=RC205; pSD25 CDS120416 1068 + 0.63015
NA RC190SubName: Full=RC190; pSD25 CDS104809 1023 - 0.631476
NA RC129SubName: Full=RC129; pSD25 CDS32014 660 - 0.506061
NA RC105SubName: Full=RC105; pSD25 CDS6354 693 - 0.643579
NA RC194SubName: Full=RC194; pSD25 CDS110251 1200 - 0.541667
NA RC215SubName: Full=RC215; pSD25 CDS129341 870 + 0.597701
NA RC160SubName: Full=RC160; pSD25 CDS66030 1008 + 0.614087
NA RC173SubName: Full=RC173; pSD25 CDS84517 2334 - 0.648243
NA RC189SubName: Full=RC189; pSD25 CDS101961 2022 - 0.63996
NA RC165SubName: Full=RC165; pSD25 CDS72909 540 + 0.611111
NA RC209SubName: Full=RC209; pSD25 CDS122679 276 + 0.65942
NA RC132SubName: Full=RC132; pSD25 CDS34499 720 + 0.570833
NA RC184SubName: Full=RC184; pSD25 CDS96863 2460 - 0.656098
NA RC150SubName: Full=RC150; pSD25 CDS54650 603 - 0.640133
NA RC232SubName: Full=RC232; pSD25 CDS147523 1116 + 0.649642
NA RC104SubName: Full=RC104; pSD25 CDS5482 1122 - 0.622995
NA RC221SubName: Full=RC221; pSD25 CDS135723 1287 + 0.585082
NA RC218SubName: Full=RC218; pSD25 CDS132612 579 - 0.547496
NA RC119SubName: Full=RC119; pSD25 CDS20617 1026 - 0.564327
NA RC170SubName: Full=RC170; pSD25 CDS78933 1719 + 0.548575
NA RC101SubName: Full=RC101; pSD25 CDS1502 1017 - 0.551622
NA RC116SubName: Full=RC116; pSD25 CDS18416 669 - 0.617339
NA RC164SubName: Full=RC164; pSD25 CDS72097 654 + 0.62844
NA RC230SubName: Full=RC230; pSD25 CDS145883 603 - 0.6534
NA RC227SubName: Full=RC227; pSD25 CDS142055 1629 - 0.598527
NA RC118SubName: Full=RC118; pSD25 CDS19097 459 - 0.59695
NA RC115SubName: Full=RC115; pSD25 CDS17399 594 + 0.651515