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2024-05-02 22:50:45

Gene list

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Genomic element: pCP301

Number of genes found: 361

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Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CP0064 putative IS1 encoded proteinpCP301 CDS49511 198 - 0.484848
NA CP0109 orf, conserved hypothetical proteinpCP301 CDS90030 486 - 0.436214
NA CP0209 orf, conserved hypothetical proteinpCP301 CDS171972 639 - 0.367762
NA CP0040 IS629 ORF1pCP301 CDS32967 327 - 0.53211
NA CP0164 IS1294 ORFpCP301 CDS74712 267 - 0.576779
NA CP0212 ISSfl4 ORF2pCP301 CDS174109 348 + 0.571839
NA CP0204 ISSfl4 ORF3pCP301 CDS167760 1602 - 0.524969
NA CP0076 iso-IS1 ORF1pCP301 CDS60987 285 + 0.494737
NA CP0171 IS629 ORF1pCP301 CDS143116 327 + 0.535168
NA CP0157 IS600 ORF2pCP301 CDS136257 726 - 0.522039
NA CP0006 putative protein encoded within ISpCP301 CDS5264 402 - 0.557214
NA CP0116 IS600 ORF1pCP301 CDS97087 303 + 0.462046
NA CP0211 ISSfl4 ORF1pCP301 CDS173438 675 + 0.503704
NA CP0178 IS3 ORF2pCP301 CDS146631 243 - 0.559671
NA CP0073 ISSfl1 ORF1pCP301 CDS58935 330 + 0.50303
NA CP0214 IS100 ORF2pCP301 CDS176266 234 + 0.495726
NA CP0239 IS630 ORFpCP301 CDS195760 957 - 0.535005
NA CP0197 orf, hypothetical proteinpCP301 CDS164152 312 + 0.621795
NA CP0183 IS629 ORF1pCP301 CDS153587 327 + 0.544343
NA CP0087 IS629 ORF2pCP301 CDS72090 792 - 0.556818
NA CP0084 iso-IS10R ORFpCP301 CDS70195 1209 + 0.451613
NA CP0272 IS629 ORF1pCP301 CDS221216 168 - 0.422619
NA CP0234 orf, conserved hypothetical proteinpCP301 CDS188314 2913 - 0.508411
NA CP0033 putative transposasepCP301 CDS29516 360 + 0.461111
NA CP0222 putative protein encoded within ISpCP301 CDS179387 219 + 0.557078
NA CP0088 IS629 ORF1pCP301 CDS73096 327 - 0.544343
NA CP0026 IS100 ORF1pCP301 CDS23117 783 + 0.508301
NA CP0035 pCP301 pseudo30161 1221 - 0.478296
NA CP0230 pCP301 pseudo185100 1322 + 0.536309
NA CP0101 ISSfl2 ORFpCP301 CDS84369 1197 + 0.577277
NA CP0019 ISSfl4 ORF2pCP301 CDS15661 348 + 0.563218
NA CP0159 IS600 ORF2pCP301 CDS137406 189 + 0.460317
NA CP0221 putative IS1 encoded proteinpCP301 CDS178876 303 + 0.541254
NA CP0044 IS150 ORF1(ORF A)pCP301 CDS35565 522 - 0.45977
NA CP0184 IS629 ORF2pCP301 CDS154128 669 + 0.542601
NA CP0080 IS629 ORF1pCP301 CDS66115 327 + 0.53211
NA CP0090 putative IS1294 ORFpCP301 CDS74709 363 + 0.556474
NA CP0188 putative reverse transcriptasepCP301 CDS157675 804 - 0.549751
NA CP0110 orf, conserved hypothetical proteinpCP301 CDS90503 285 - 0.424561
NA CP0203 putative transposasepCP301 CDS167032 654 - 0.492355
NA CP0028 ISSfl3 ORFpCP301 CDS23820 1224 - 0.441176
NA CP0207 IS2 ORF2pCP301 CDS170327 738 - 0.544715
NA CP0173 IS629 ORF2pCP301 CDS144033 294 + 0.513605
NA CP0269 IS911 ORF2pCP301 CDS217155 840 + 0.546429
NA CP0092 IS1294 ORFpCP301 CDS76328 930 - 0.565591
NA CP0240 pCP301 pseudo196725 822 - 0.508516
NA CP0161 putative IS1294 ORFpCP301 CDS137785 189 + 0.566138
NA CP0200 orf, conserved hypothetical proteinpCP301 CDS165429 201 + 0.567164
NA CP0263 putative IS1294 ORFpCP301 CDS212633 189 - 0.566138
NA CP0042 putative IS1294 ORFpCP301 CDS33762 189 + 0.566138
NA CP0007 IS600 ORF2pCP301 CDS5745 351 - 0.541311
NA CP0242 IS600 ORF1pCP301 CDS197582 303 - 0.458746
NA CP0038 orf, hypothetical proteinpCP301 CDS31392 420 + 0.530952
NA CP0247 oriT nicking and unwinding proteinpCP301 CDS198803 393 + 0.562341
NA CP0060a orf, hypothetical proteinpCP301 CDS45830 273 + 0.494505
NA CP0177 putative reverse transcriptasepCP301 CDS146245 240 - 0.520833
NA CP0059 orf, conserved hypothetical proteinpCP301 CDS44783 483 - 0.457557
NA CP0025 IS3 ORF2pCP301 CDS21746 585 + 0.528205
NA CP0193 orf, conserved hypothetical proteinpCP301 CDS160896 381 - 0.417323
NA CP0075 IS630 ORFpCP301 CDS59774 1032 + 0.530039
NA CP0023 orf, hypothetical proteinpCP301 CDS20087 315 + 0.495238
NA CP0011 orf, conserved hypothetical proteinpCP301 CDS10420 375 - 0.525333
NA CP0163 pCP301 pseudo138320 866 + 0.570439
NA CP0261 orf, hypothetical proteinpCP301 CDS211006 192 + 0.53125
NA CP0201 orf, conserved hypothetical proteinpCP301 CDS165663 216 + 0.574074
NA CP0206 ISSfl4 ORF1pCP301 CDS169705 675 - 0.502222
NA CP0089 IS100 ORF2pCP301 CDS73674 663 + 0.494721
NA CP0219 orf, hypothetical proteinpCP301 CDS178125 180 + 0.405556
NA CP0018 putative protein encoded within ISpCP301 CDS15326 336 + 0.547619
NA CP0062 ISSfl1 ORF2pCP301 CDS47361 231 + 0.493506
NA CP0061 IS1294 ORFpCP301 CDS46083 1209 + 0.575682
NA CP0172 IS629 ORF2pCP301 CDS143657 408 + 0.566176
NA CP0081 IS629 ORF2pCP301 CDS66656 714 + 0.543417
NA CP0013 putative IS1 ORFpCP301 CDS11015 204 + 0.45098
NA CP0047 IS2 ORF2pCP301 CDS37780 288 + 0.5
NA CP0086 putative protein encoded within ISpCP301 CDS71614 504 - 0.541667
NA CP0111 orf, hypothetical proteinpCP301 CDS91689 165 + 0.587879
NA CP0016 putative IS91 ORF2pCP301 CDS13227 186 - 0.532258
NA CP0270 IS3 ORF2pCP301 CDS218767 153 + 0.490196
NA CP0097 orf, conserved hypothetical proteinpCP301 CDS82115 390 - 0.487179
NA CP0098 ISSfl1 ORF2pCP301 CDS82691 390 - 0.517949
NA CP0058 IS600 ORF1pCP301 CDS44413 303 - 0.458746
NA CP0248 oriT nicking and unwinding proteinpCP301 CDS199216 1365 + 0.583883
NA CP0169 orf, hypothetical proteinpCP301 CDS142682 429 + 0.519814
NA CP0262 IS1294 ORFpCP301 CDS211427 1197 - 0.578947
NA CP0162 orf, hypothetical proteinpCP301 CDS137953 357 - 0.579832
NA CP0014 orf, conserved hypothetical proteinpCP301 CDS11327 579 - 0.312608
NA CP0114 ISSfl4 ORF1pCP301 CDS94052 675 - 0.502222
NA CP0104 pCP301 pseudo86204 641 - 0.50546
NA CP0117 IS600 ORF2pCP301 CDS97417 735 + 0.517007
NA CP0095 ISSfl4 ORF3pCP301 CDS81806 300 - 0.53
NA CP0069 IS21 ORF2pCP301 CDS51950 627 + 0.532695
NA CP0021 putative transposasepCP301 CDS18104 207 + 0.444444
NA CP0017 IS4 ORFpCP301 CDS13870 1344 - 0.542411
NA CP0074 ISSfl1 ORF2pCP301 CDS59270 390 + 0.517949
NA CP0068 putative protein encoded within ISpCP301 CDS51442 489 + 0.521472
NA CP0191 ISSfl1 ORF2pCP301 CDS160006 390 - 0.512821
NA CP0120 ISSfl2 ORFpCP301 CDS100321 1197 - 0.577277
NA CP0085 IS100 ORF2pCP301 CDS71382 192 - 0.505208
NA CP0113 ISSfl4 ORF2pCP301 CDS93705 351 - 0.549858
NA CP0106 IS2 ORF1pCP301 CDS87873 411 - 0.506083
NA CP0039 IS629 ORF2pCP301 CDS32084 669 - 0.542601
NA CP0264 putative transposasepCP301 CDS212967 168 + 0.482143
NA CP0268 IS911 ORF1pCP301 CDS216790 339 + 0.454277
NA CP0067 IS629 ORF2pCP301 CDS50808 669 + 0.542601
NA CP0077 iso-IS1 ORF2pCP301 CDS61397 183 + 0.546448
NA CP0072 IS1294 ORFpCP301 CDS57439 1200 + 0.576667
NA CP0160 putative IS1294 ORFpCP301 CDS137606 165 + 0.551515
NA CP0008 IS600 ORF2pCP301 CDS6107 819 - 0.510379
NA CP0187 orf, conserved hypothetical proteinpCP301 CDS157296 327 - 0.464832
NA CP0066 IS629 ORF1pCP301 CDS50267 327 + 0.53211
NA CP0179 IS629 ORF2pCP301 CDS146846 564 - 0.562057
NA CP0167 orf, conserved hypothetical proteinpCP301 CDS139920 405 - 0.493827
NA CP0015 IS91 ORFpCP301 CDS12871 357 - 0.521008
NA CP0158 IS600 ORF1pCP301 CDS137018 303 - 0.462046
NA CP0166 IS3 ORF1pCP301 CDS139651 216 - 0.50463
NA CP0176 putative IS91 ORF2pCP301 CDS145160 423 - 0.470449
NA CP0165 IS3 ORF2pCP301 CDS139297 294 - 0.581633
NA CP0255 IS600 ORF1pCP301 CDS207182 303 - 0.465347
NA CP0104 pCP301 pseudo86204 641 - 0.50546
NA CP0060 orf, conserved hypothetical proteinpCP301 CDS45256 303 - 0.448845
NA CP0170 orf, conserved hypothetical proteinpCP301 CDS142609 375 - 0.52
NA CP0121 IS100 ORF1pCP301 CDS101709 1005 - 0.526368
NA CP0189 IS600 ORF2pCP301 CDS158491 201 - 0.522388
NA CP0205 ISSfl4 ORF2pCP301 CDS169358 351 - 0.549858
NA CP0041 IS150 ORF BpCP301 CDS33299 408 - 0.490196
NA CP0267 IS600 ORF1pCP301 CDS216373 384 + 0.484375
NA CP0266 orf, hypothetical proteinpCP301 CDS216182 153 - 0.444444
NA CP0231 IS629 ORF1pCP301 CDS186424 330 + 0.545455
NA CP0002 putative resolvasepCP301 CDS485 465 + 0.507527
NA CP0112 ISSfl4 ORF3pCP301 CDS92107 1602 - 0.524345
NA CP0168 orf, conserved hypothetical proteinpCP301 CDS140876 717 - 0.313808
NA CP0055 IS629 ORF1pCP301 CDS42940 327 + 0.544343
NA CP0037 orf, hypothetical proteinpCP301 CDS31156 396 + 0.510101
NA CP0256 orf, conserved hypothetical proteinpCP301 CDS207606 168 + 0.511905
NA CP0233 IS3 ORF2pCP301 CDS188108 219 + 0.579909
NA CP0091 iso-IS10R ORFpCP301 CDS75050 1209 - 0.450786
NA CP0027 IS100 ORF1pCP301 CDS25018 432 + 0.525463
NA CP0053 pCP301 pseudo39660 1201 - 0.577019
NA CP0180 IS629 ORF1pCP301 CDS147516 219 - 0.534247
NA CP0175 IS91 ORFpCP301 CDS144804 357 - 0.52381
NA CP0108 IS600 ORF1pCP301 CDS89207 303 - 0.465347
NA CP0030 iso-IS1 ORF2pCP301 CDS26244 390 + 0.520513
NA CP0192 ISSfl1 ORF1pCP301 CDS160401 450 - 0.528889
NA CP0213 ISSfl4 ORF3pCP301 CDS174476 1602 + 0.52372
NA CP0210 iso-IS1 ORF1pCP301 CDS172967 273 - 0.512821
NA CP0186 orf, hypothetical proteinpCP301 CDS156758 186 + 0.419355
NA CP0119 putative transposasepCP301 CDS99455 777 + 0.57529
NA CP0053 pCP301 pseudo39660 1201 - 0.577019
NA CP0208 IS2 ORF1pCP301 CDS171135 411 - 0.510949
NA CP0012 orf, conserved hypothetical proteinpCP301 CDS10620 378 - 0.537037
NA CP0232 IS629 ORF2pCP301 CDS186968 669 + 0.541106
NA CP0174 putative transposasepCP301 CDS144329 231 - 0.463203
NA CP0163 pCP301 pseudo138320 866 + 0.570439
NA CP0107 IS600 ORF2pCP301 CDS88353 819 - 0.5116
NA CP0057 IS600 ORF2pCP301 CDS44189 189 - 0.529101
NA CP0083 orf, conserved hypothetical proteinpCP301 CDS69660 291 + 0.42268
NA CP0254 IS600 ORF2pCP301 CDS206328 819 - 0.5116
NA CP0240 pCP301 pseudo196725 822 - 0.508516
NA CP0034 orf, hypothetical proteinpCP301 CDS29339 183 - 0.415301
NA CP0100 orf, conserved hypothetical proteinpCP301 CDS83645 474 - 0.350211
NA CP0102 orf, conserved hypothetical proteinpCP301 CDS85560 420 - 0.314286
NA CP0218 orf, hypothetical proteinpCP301 CDS177797 276 + 0.5
NA CP0043 IS1294 ORFpCP301 CDS33960 1200 + 0.576667
NA CP0118 IS150 ORF BpCP301 CDS98573 423 + 0.503546
NA CP0215 orf, conserved hypothetical proteinpCP301 CDS176551 291 - 0.419244
NA CP0035 pCP301 pseudo30161 1221 - 0.478296
NA CP0050 putative IS1 encoded proteinpCP301 CDS38612 213 - 0.474178
NA CP0230 pCP301 pseudo185100 1322 + 0.536309
NA CP0249 oriT nicking and unwinding proteinpCP301 CDS200577 3501 + 0.603542
NA CP0071 putative IS1294 ORFpCP301 CDS57241 189 + 0.566138
NA CP0223 ISSfl4 ORF3pCP301 CDS179624 381 + 0.577428
NA CP0099 ISSfl1 ORF1pCP301 CDS83086 540 - 0.505556
NA CP0217 orf, hypothetical proteinpCP301 CDS177513 285 + 0.54386
NA CP0029 IS100 ORF2pCP301 CDS25446 783 + 0.501916
NA CP0045 IS100 ORF2pCP301 CDS36124 384 + 0.450521
NA CP0001 IS2 ORF2pCP301 CDS191 303 - 0.49505
NA CP0105 IS2 ORF2pCP301 CDS87010 906 - 0.554084
NA CP0216 orf, hypothetical proteinpCP301 CDS176810 252 - 0.440476
NA CP0020 ISSfl4 ORF3pCP301 CDS16028 1308 + 0.559633
NA CP0096 putative IS91 ORF2pCP301 CDS82466 189 + 0.433862
NA CP0056 IS629 ORF2pCP301 CDS43481 669 + 0.54858
IS1 pCP301 repeat_region38650 768 + 0.515625
IS1 pCP301 repeat_region178283 768 - 0.518229
IS1 pCP301 repeat_region49534 681 + 0.527166
IS100 pCP301 repeat_region176267 196 + 0.505102
IS100 pCP301 repeat_region23035 760 + 0.522368
IS100 pCP301 repeat_region25096 1200 + 0.515
IS100 pCP301 repeat_region73621 782 + 0.494885
IS100 pCP301 repeat_region71417 166 - 0.524096
IS100 pCP301 repeat_region36133 315 + 0.504762
IS100 pCP301 repeat_region101749 1052 - 0.528517
IS1294 pCP301 repeat_region46110 1354 + 0.56647
IS1294 pCP301 repeat_region57640 1171 + 0.564475
IS1294 pCP301 repeat_region33643 1689 + 0.563055
IS1294 pCP301 repeat_region74540 497 - 0.541247
IS1294 pCP301 repeat_region211527 1414 - 0.567185
IS1294 pCP301 repeat_region57122 463 + 0.565875
IS1294 pCP301 repeat_region137666 463 + 0.565875
IS1294 pCP301 repeat_region138185 1170 + 0.563248
IS150 pCP301 repeat_region33347 300 - 0.463333
IS150 pCP301 repeat_region35330 804 - 0.456468
IS2 pCP301 repeat_region170462 1130 + 0.540708
IS2 pCP301 repeat_region184 381 + 0.51706
IS2 pCP301 repeat_region86999 1331 + 0.532682
IS21 pCP301 repeat_region99219 225 + 0.56
IS21 pCP301 repeat_region12299 148 - 0.418919
IS21 pCP301 repeat_region12445 118 - 0.5
IS3 pCP301 repeat_region139353 235 - 0.608511
IS3 pCP301 repeat_region146678 369 - 0.579946
IS3 pCP301 repeat_region187957 329 + 0.586626
IS3 pCP301 repeat_region139718 205 - 0.468293
IS3 pCP301 repeat_region218765 181 + 0.491713
IS3 pCP301 repeat_region17259 198 + 0.469697
IS3 pCP301 repeat_region21774 587 + 0.53322
IS4 pCP301 repeat_region13857 1428 - 0.539216
IS4 pCP301 repeat_region185034 1336 + 0.53518
IS600 pCP301 repeat_region5827 229 + 0.541485
IS600 pCP301 repeat_region196685 1264 + 0.489715
IS600 pCP301 repeat_region216309 341 - 0.460411
IS600 pCP301 repeat_region136287 1098 + 0.503643
IS600 pCP301 repeat_region158508 199 + 0.517588
IS600 pCP301 repeat_region137385 253 - 0.462451
IS600 pCP301 repeat_region44211 569 + 0.485062
IS600 pCP301 repeat_region67366 211 + 0.549763
IS600 pCP301 repeat_region6064 1264 + 0.488924
IS600 pCP301 repeat_region88330 1244 + 0.491961
IS600 pCP301 repeat_region97445 750 - 0.510667
IS600 pCP301 repeat_region97023 424 - 0.464623
IS600 pCP301 repeat_region206285 1264 + 0.492089
IS629 pCP301 repeat_region153533 1306 + 0.539816
IS629 pCP301 repeat_region50213 1306 + 0.536753
IS629 pCP301 repeat_region186370 1309 + 0.540107
IS629 pCP301 repeat_region147045 744 - 0.534946
IS629 pCP301 repeat_region3218 130 + 0.476923
IS629 pCP301 repeat_region32042 1306 - 0.536753
IS629 pCP301 repeat_region42886 1306 + 0.54441
IS629 pCP301 repeat_region143062 1307 + 0.537873
IS629 pCP301 repeat_region66061 1305 + 0.538697
IS629 pCP301 repeat_region221284 154 - 0.487013
IS629 pCP301 repeat_region72172 1305 - 0.540996
IS630 pCP301 repeat_region18392 143 + 0.454545
IS630 pCP301 repeat_region195737 948 - 0.533755
IS630 pCP301 repeat_region59670 1160 + 0.522414
IS91 pCP301 repeat_region211241 291 - 0.515464
IS91 pCP301 repeat_region145091 523 - 0.493308
IS91 pCP301 repeat_region13158 333 - 0.513514
IS91 pCP301 repeat_region82435 217 + 0.465438
IS91 pCP301 repeat_region12698 464 - 0.553879
IS91 pCP301 repeat_region144712 383 - 0.548303
IS911 pCP301 repeat_region216754 1249 + 0.518815
ISSfl1 pCP301 repeat_region82676 824 + 0.519417
ISSfl1 pCP301 repeat_region159991 923 + 0.510293
ISSfl1 pCP301 repeat_region58809 864 - 0.519676
ISSfl2 pCP301 repeat_region100290 1374 + 0.577147
ISSfl2 pCP301 repeat_region84223 1364 - 0.575513
ISSfl2 pCP301 repeat_region39632 1375 + 0.577455
ISSfl3 pCP301 repeat_region89574 310 - 0.445161
ISSfl3 pCP301 repeat_region23794 1302 + 0.44086
ISSfl4 pCP301 repeat_region169496 966 + 0.512422
ISSfl4 pCP301 repeat_region173356 2754 - 0.525054
ISSfl4 pCP301 repeat_region92075 2734 + 0.523043
ISSfl4 pCP301 repeat_region167728 1774 + 0.529876
acp CP0124 Acp, putative acyl carrier proteinpCP301 CDS106938 237 - 0.291139
ccdA CP0224 post-segregation antitoxinpCP301 CDS180540 219 + 0.497717
ccdB CP0225 post-segregation toxinpCP301 CDS180739 327 + 0.504587
finO CP0251 FinO, putative fertility inhibition proteinpCP301 CDS204898 561 + 0.566845
icsA/virG CP0182 IcsA (VirG), outermembrane protein exposed to the bacterial surface by a C-terminal autotransporter domain and involved in the movement of intracellulpCP301 CDS149644 3309 + 0.409791
icsB CP0132 IcsB, invasion proteinpCP301 CDS114564 1485 - 0.338721
icsP/sopA CP0271 IcsP (SopA), outermembrane protease of the OmpP family, involved in cleavage of surface exposed IcsApCP301 CDS220300 948 + 0.376582
insA CP0049 IS1 ORF1pCP301 CDS38753 228 + 0.52193
insB CP0220 IS1 ORF2pCP301 CDS178298 504 - 0.529762
insB CP0065 IS1 ORF2pCP301 CDS49783 459 + 0.546841
insB CP0051 IS1 ORF2pCP301 CDS39007 396 + 0.522727
ipaA CP0125 IpaA, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cellspCP301 CDS107178 1902 - 0.351735
ipaB CP0128 IpaB, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cellspCP301 CDS111248 1743 - 0.380952
ipaC CP0127 IpaC, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cellspCP301 CDS110137 1092 - 0.389194
ipaD CP0126 IpaD, secreted by the Mxi-Spa machinery, required for entry of bacteria into epithelial cellspCP301 CDS109088 999 - 0.357357
ipaH1.4 CP0265 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinerypCP301 CDS213152 1728 - 0.459491
ipaH2.5 CP0054 invasion plasmid antigen, probably secreted by the Mxi-Spa machinerypCP301 CDS41197 1692 + 0.459811
ipaH4.5 CP0079 invasion plasmid antigen, probably secreted by the Mxi-Spa machinerypCP301 CDS64339 1725 + 0.473043
ipaH7.8 CP0078 invasion plasmid antigen, probably secreted by the Mxi-Spa machinerypCP301 CDS62214 1698 + 0.459364
ipaH9.8 CP0226 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinerypCP301 CDS181458 1638 + 0.483516
ipaJ CP0122 IpaJ, invasion plasmid antigenpCP301 CDS104066 780 + 0.378205
ipgA CP0131 IpgA, similarities to IpgE, putative chaperonepCP301 CDS114162 390 - 0.302564
ipgB1 CP0130 IpgB1, secreted by the Mxi-Spa machinery, function unknownpCP301 CDS113520 627 - 0.344498
ipgB2 CP0024 IpgB2, probably secreted by the Mxi-Spa secretion machinerypCP301 CDS20683 567 + 0.326279
ipgC CP0129 IpgC, cytoplasmic chaperone for IpaB and IpaCpCP301 CDS112996 468 - 0.354701
ipgD CP0133 IpgD, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cellspCP301 CDS116362 1617 + 0.357452
ipgE CP0134 IpgE, cytoplasmic chaperone for IpgDpCP301 CDS117988 363 + 0.349862
ipgF CP0135 IpgF, periplasmic protein, similarities to the catalytic site of lyzozymespCP301 CDS118350 459 + 0.357298
ipgH CP0082 invasion plasmid gene productpCP301 CDS68288 1404 + 0.435185
iso-IS1 pCP301 repeat_region26295 348 + 0.525862
iso-IS1 pCP301 repeat_region215635 127 - 0.496063
iso-IS1 pCP301 repeat_region172791 341 - 0.527859
iso-IS1 pCP301 repeat_region61107 593 + 0.526138
iso-IS1 pCP301 repeat_region22659 356 + 0.522472
iso-IS10R pCP301 repeat_region75037 1329 - 0.440181
iso-IS10R pCP301 repeat_region70088 1329 + 0.440933
mkaD CP0010 mouse killing factorpCP301 CDS9576 720 - 0.381944
mob9 CP0228 plasmid mobilization proteinpCP301 CDS184482 180 - 0.466667
msbB2 CP0238 MsbB2, probable lipid A transacetylasepCP301 CDS194662 945 + 0.432804
mvpA CP0245 plasmid maintenance proteinpCP301 CDS198117 399 - 0.506266
mvpT CP0246 plasmid maintenance proteinpCP301 CDS198515 228 - 0.526316
mxiA CP0147 MxiA, innermembrane protein, component of the Mxi-Spa secretion machinerypCP301 CDS126749 2061 + 0.342067
mxiC CP0146 MxiC, secreted by and putative component of the Mxi-Spa secretion machinery, similarities to YopN (secreted by the type III secretion machinery of YerpCP301 CDS125669 1068 + 0.33427
mxiD CP0145 MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinerypCP301 CDS123950 1701 + 0.33157
mxiE CP0144 MxiE, similarities to transcriptional activators of the AraC family, function unknownpCP301 CDS123331 633 + 0.327014
mxiG CP0136 MxiG, component of the Mxi-Spa secretion machinery, contains one transmembrane segmentpCP301 CDS118817 1116 + 0.310932
mxiH CP0137 MxiH, component of the Mxi-Spa secretion machinerypCP301 CDS119940 252 + 0.337302
mxiI CP0138 MxiI, component of the Mxi-Spa secretion machinerypCP301 CDS120204 294 + 0.35034
mxiJ CP0139 MxiJ, lipoprotein, component of the Mxi-Spa secretion machinerypCP301 CDS120503 726 + 0.342975
mxiK CP0140 MxiK, putative component of the Mxi-Spa secretion machinerypCP301 CDS121225 528 + 0.339015
mxiL CP0142 MxiL, secreted by and putative component of the Mxi-Spa secretion machinerypCP301 CDS122382 408 + 0.306373
mxiM CP0143 MxiM, lipoprotein, component of the Mxi-Spa secretion machinerypCP301 CDS122773 429 + 0.298368
mxiN CP0141 MxiN, putative component of the Mxi-Spa secretion machinerypCP301 CDS121694 696 + 0.318966
ospB CP0003 OspB, protein secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS1176 867 + 0.32872
ospC1 CP0094 OspC1, secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS79939 1413 - 0.318471
ospC2 CP0063 OspC2, probably secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS47740 1455 - 0.325086
ospC3 CP0005 OspC3, probably secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS3471 1275 - 0.316863
ospC4 CP0115 OspC4, probably secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS95295 1455 + 0.315464
ospD1 CP0022 OspD1, secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS18898 678 + 0.355457
ospD2 CP0009 OspD2, probably secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS7435 1710 - 0.331579
ospD3 CP0093 OspD3 (SenA), probably secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS77913 1698 - 0.357479
ospG CP0227 OspG, secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS183824 591 + 0.357022
parA CP0031 plasmid segregation proteinpCP301 CDS26955 1200 + 0.4425
parB CP0032 plasmid segregation proteinpCP301 CDS28154 981 + 0.423038
phoN1 CP0190 PhoN1, periplasmic non specific acid ohosphatasepCP301 CDS159087 750 + 0.422667
phoN2/apy CP0004 PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolasepCP301 CDS2371 741 + 0.422402
repA CP0260 RepA, replication proteinpCP301 CDS209448 858 + 0.578089
repB CP0258 RepB, replication proteinpCP301 CDS208897 261 + 0.417625
rfbU CP0236 UDP-sugar hydrolasepCP301 CDS192554 1089 + 0.43067
sepA CP0070 SepA, extracellular serine protease of the IgA1 protease family, secreted by a C-terminal autotransporter domainpCP301 CDS52745 4095 - 0.487424
shf CP0235 putative carbohydrate transport proteinpCP301 CDS191709 843 + 0.400949
spa13 CP0150 Spa13, component of the Mxi-Spa secretion machinerypCP301 CDS130612 339 + 0.336283
spa15 CP0148 Spa15, putative component of the Mxi-Spa secretion machinerypCP301 CDS128822 402 + 0.333333
spa24 CP0153 Spa24, component of the Mxi-Spa secretion machinerypCP301 CDS132695 651 + 0.345622
spa29 CP0155 Spa29, component of the Mxi-Spa secretion machinerypCP301 CDS133620 771 + 0.326848
spa32 CP0151 Spa32, secreted by and component of the Mxi-Spa machinerypCP301 CDS130937 879 + 0.315131
spa33 CP0152 Spa33, component of the Mxi-Spa secretion machinerypCP301 CDS131944 747 + 0.314592
spa40 CP0156 Spa40, component of the Mxi-Spa secretion machinerypCP301 CDS134397 1029 + 0.317784
spa47 CP0149 Spa47, component of the Mxi-Spa secretion machinery, putative ATPasepCP301 CDS129227 1293 + 0.392111
spa9 CP0154 Spa9, component of the Mxi-Spa secretion machinerypCP301 CDS133360 261 + 0.344828
stbA CP0195 plasmid stable inheritance proteinpCP301 CDS161854 960 - 0.398958
stbB CP0194 plasmid stable inheritance proteinpCP301 CDS161459 396 - 0.388889
tap CP0259 TapApCP301 CDS209381 75 + 0.493333
traD CP0243 DNA transport proteinpCP301 CDS197923 186 + 0.543011
traX CP0250 F pilin acetylation proteinpCP301 CDS204097 747 + 0.576975
trbH CP0244 orf, conserved hypothetical proteinpCP301 CDS198108 720 + 0.495833
ushA CP0185 UshA, probable periplasmic UDP-sugar hydrolasepCP301 CDS155137 1653 + 0.404719
virA CP0181 VirA, secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS147913 1203 - 0.352452
virB CP0123 VirB, transcriptional activator required for tanscription of the ipa, mxi, and spa operonspCP301 CDS105792 930 - 0.339785
virF CP0046 VirF, member of the AraC family of transcriptional activators, required for transcription of virB and icsApCP301 CDS36449 789 - 0.304182
virK CP0237 VirK, required for proper localization of IcsA (VirG) at the surface of bacteriapCP301 CDS193647 951 + 0.416404
yccB CP0196 orf, conserved hypothetical proteinpCP301 CDS163184 972 + 0.540123
ycdA CP0198 orf, conserved hypothetical proteinpCP301 CDS164527 684 + 0.55848
yceA CP0199 orf, conserved hypothetical proteinpCP301 CDS165211 222 + 0.531532
ycfA CP0202 orf, conserved hypothetical proteinpCP301 CDS165923 771 + 0.607004
yigA CP0252 orf, conserved hypothetical proteinpCP301 CDS205589 213 + 0.615023
yigB CP0253 orf, conserved hypothetical proteinpCP301 CDS205985 303 + 0.455446
yihA CP0257 orf, conserved hypothetical proteinpCP301 CDS208067 591 + 0.492386