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2024-05-19 11:53:05

Gene list

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Genomic element: pMT1

Number of genes found: 139

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Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pMT018 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS20361 459 - 0.535948
NA pMT058 hypothetical proteinSubName: Full=Hypothetical regulator; SubName: Full=Uncharacterized protein; pMT1 CDS52490 216 - 0.550926
NA pMT008 pMT1 misc_feature11407 69 - 0.550725
NA pMT068 hypothetical proteinSubName: Full=Putative exonuclease; SubName: Full=Uncharacterized protein; pMT1 CDS56986 945 - 0.526984
NA pMT003 phage lambda-related tail assembly protein GSubName: Full=Lambda tail fiber assembly protein G; SubName: Full=Phage lambda-related tail assembly protein G; SubName: Full=Uncharacterized protein; pMT1 CDS2018 609 - 0.456486
NA pMT011 putative phage tail proteinSubName: Full=Lambda minor tail fiber protein M; SubName: Full=Phage lambda-related tail protein M; SubName: Full=Putative phage tail protein; SubName: Full=Uncharacterized protein; pMT1 CDS13338 336 - 0.488095
NA pMT055 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS49226 147 - 0.455782
NA pMT012 pMT1 misc_feature16421 69 - 0.550725
NA pMT066 putative recombinaseSubName: Full=Putative recombinase; pMT1 CDS55641 1077 - 0.545961
NA pMT015 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS18691 747 - 0.535475
NA pMT005 phage lambda-related proteinSubName: Full=Lambda hypothetical; SubName: Full=Phage lambda-related protein; pMT1 CDS2928 2937 - 0.49983
NA pMT031 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS30430 702 - 0.55698
NA pMT064 putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Putative serine protease; SubName: Full=Putative serine proteinase; pMT1 CDS54516 831 - 0.515042
NA pMT077 putative porphyrin biosynthetic proteinSubName: Full=Putative porphyrin biosynthetic enzyme; SubName: Full=Putative porphyrin biosynthetic protein; pMT1 CDS68144 2367 - 0.52049
NA pMT089 pMT1 misc_feature79732 69 - 0.434783
NA pMT002 putative transposaseSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS1106 783 + 0.50447
NA pMT050 putative exonuclease subunit 2SubName: Full=Putative exonuclease; SubName: Full=Putative exonuclease subunit 2; pMT1 CDS44419 1929 - 0.52929
NA pMT004 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS2719 213 - 0.42723
NA pMT087 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS79285 153 - 0.503268
NA pMT065 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS55350 201 - 0.447761
NA pMT023 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS23753 897 - 0.560758
NA pMT009 putative phage tail proteinSubName: Full=Putative phage tail protein; pMT1 CDS11760 798 - 0.551378
NA pMT013 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS17964 270 - 0.551852
NA pMT001 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS87 1023 + 0.527859
NA pMT075 putative transposase ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS63081 783 + 0.50447
NA pMT014 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS18314 318 - 0.5
NA pMT096 transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS82761 1023 - 0.527859
NA pMT019 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS20803 834 - 0.544365
NA pMT078 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS70620 213 - 0.43662
NA pMT070 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS59139 474 - 0.5
NA pMT053 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS47897 273 + 0.43956
NA pMT012 putative membrane proteinSubName: Full=Putative membrane protein; pMT1 CDS13715 4242 - 0.566714
NA pMT008 putative phage tail proteinSubName: Full=Phage lambda tail assembly protein I; SubName: Full=Putative phage tail protein; SubName: Full=Uncharacterized protein; pMT1 CDS11185 588 - 0.527211
NA pMT028 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS28652 900 - 0.556667
NA pMT012 pMT1 misc_feature15260 162 - 0.604938
NA pMT036 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; SubName: Full=Uncharacterized protein; pMT1 CDS34152 564 + 0.514184
NA pMT077 pMT1 misc_feature69284 402 - 0.514925
NA pMT079 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS70671 270 + 0.403704
NA pMT045 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS38813 489 - 0.525562
NA pMT122 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS101236 396 + 0.527778
NA pMT097 putative DNA-binding proteinSubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; pMT1 CDS83907 2010 - 0.61393
NA pMT059 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS52702 336 - 0.505952
NA pMT024 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS24672 1590 - 0.510063
NA pMT030 putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter; SubName: Full=Putative ABC transporter ATP-binding protein; pMT1 CDS29795 699 - 0.553648
NA pMT086 putative C-type natriuretic proteinSubName: Full=Putative C-type natriuretic protein; SubName: Full=Uncharacterized protein; pMT1 CDS78983 306 - 0.48366
NA pMT081 putative integraseSubName: Full=Putative integrase; SubName: Full=Uncharacterized protein; pMT1 CDS71476 1179 - 0.478372
NA pMT125 probable transposaseSubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Transposase; pMT1 CDS102327 1065 - 0.515493
NA pMT022 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS22851 876 - 0.539954
NA pMT033 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS31861 1560 + 0.514744
NA pMT062 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS53597 411 - 0.559611
NA pMT091 hypothetical proteinSubName: Full=Heavy-metal transporting CPx-type ATPase; SubName: Full=Uncharacterized protein; pMT1 CDS81134 255 + 0.498039
NA pMT124 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS101805 324 + 0.484568
NA pMT047 putative ribonucleoside-diphosphate reductase alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; pMT1 CDS40708 2316 - 0.544473
NA pMT111 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS92573 234 + 0.384615
NA pMT098 hypothetical proteinRecName: Full=UPF0401 protein YubL; pMT1 CDS85989 231 - 0.593074
NA pMT069 hypothetical proteinSubName: Full=P2 protein homolog; SubName: Full=Uncharacterized protein; pMT1 CDS57991 1029 - 0.519922
NA pMT051 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS46344 225 - 0.484444
NA pMT088 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS79434 216 - 0.481481
NA pMT095 ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS81982 783 - 0.50447
NA pMT116 putative resolvaseSubName: Full=Putative resolvase; SubName: Full=Putative site-specific recombinase; pMT1 CDS95941 621 + 0.495974
NA pMT101 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS87722 351 + 0.595442
NA pMT106 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS89694 528 + 0.566288
NA pMT117 hypothetical proteinSubName: Full=Putative transposase; SubName: Full=Uncharacterized protein; pMT1 CDS96582 987 + 0.507599
NA pMT027 hypothetical proteinSubName: Full=RGD cell attachment site containing protein; SubName: Full=Uncharacterized protein; pMT1 CDS28376 267 - 0.524345
NA pMT103 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS88746 492 - 0.558943
NA pMT035 putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Uncharacterized protein; pMT1 CDS33761 423 + 0.541371
NA pMT020 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS21636 435 - 0.51954
NA pMT017 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS19897 474 - 0.544304
NA pMT065 pMT1 misc_feature55464 69 - 0.478261
NA pMT109 putative DNA-binding proteinSubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; pMT1 CDS90937 1398 - 0.483548
NA pMT042 ABC-type transport protein uup homologSubName: Full=ABC-type transport protein uup homolog; SubName: Full=Uncharacterized protein; pMT1 CDS37327 351 - 0.498576
NA pMT114 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS95170 246 + 0.426829
NA pMT126 transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Transposase for the IS285 insertion element; pMT1 CDS103818 1209 - 0.495451
NA pMT080 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS71095 387 + 0.496124
NA pMT034 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS33423 279 + 0.458781
NA pMT016 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS19512 384 - 0.466146
NA pMT012 pMT1 misc_feature16502 69 - 0.623188
NA pMT040 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS36639 483 - 0.503106
NA pMT032 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS31098 699 - 0.527897
NA pMT067 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS56720 267 - 0.546816
NA pMT048 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS43101 570 - 0.52807
NA pMT105 putative DNA methylaseSubName: Full=Adenine-specific methyltransferase; SubName: Full=Putative DNA methylase; SubName: Full=Putative hemagglutinin-associated protein; SubName: Full=Uncharacterized protein; pMT1 CDS89397 678 - 0.581121
NA pMT071 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS60115 564 + 0.512411
NA pMT041 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS37134 234 - 0.529915
NA pMT010 putative phage tail proteinSubName: Full=Phage lambda-related tail protein L; SubName: Full=Putative phage tail protein; pMT1 CDS12550 732 - 0.525956
NA pMT054 putative periplasmic proteinSubName: Full=Hypothetical lipoprotein; SubName: Full=Putative lipoprotein; SubName: Full=Putative periplasmic protein; pMT1 CDS48066 1023 + 0.449658
NA pMT044 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS38505 312 - 0.487179
NA pMT102 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS87913 780 - 0.552564
NA pMT100 putative antirestriction proteinSubName: Full=Antirestriction protein; SubName: Full=Antirestriction protein ArdA; SubName: Full=Antirestriction protein homolog; SubName: Full=Putative antirestriction protein; pMT1 CDS87008 507 - 0.538462
NA pMT121 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS101037 309 + 0.566343
NA pMT115 hypothetical proteinSubName: Full=Inner membrane protein; SubName: Full=Uncharacterized protein; pMT1 CDS95415 327 + 0.434251
NA pMT089 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS79633 177 - 0.451977
NA pMT074 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS62062 1023 + 0.527859
NA pMT092 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS81166 477 - 0.515723
NA pMT086 pMT1 misc_feature79184 69 - 0.507246
NA pMT060 pMT1 misc_feature53040 69 - 0.521739
NA pMT118 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS97591 291 - 0.5189
NA pMT072 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS60708 444 - 0.518018
NA pMT120 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS100496 471 - 0.558386
NA pMT026 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS27539 642 - 0.554517
NA pMT108 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS90467 309 + 0.504854
NA pMT052 putative exonuclease subunit 1SubName: Full=Putative exonuclease subunit 1; SubName: Full=Uncharacterized protein; pMT1 CDS46565 1086 - 0.540516
NA pMT007 phage lambda-related host specificity protein JSubName: Full=Lambda host specificity protein J; SubName: Full=Phage lambda-related host specificity protein J; SubName: Full=Putative phage tail protein; pMT1 CDS6532 4638 - 0.526304
NA pMT107 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS90322 441 - 0.510204
NA pMT029 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS29548 255 - 0.52549
NA pMT107 pMT1 misc_feature90541 147 - 0.510204
NA pMT060 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS53034 180 - 0.455556
NA pMT076 putative porphyrin biosynthetic proteinSubName: Full=CobS homolog; SubName: Full=Putative porphyrin biosynthetic enzyme; SubName: Full=Putative porphyrin biosynthetic protein; pMT1 CDS66812 1236 - 0.526699
NA pMT049 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS43683 747 - 0.497992
NA pMT046 putative ribonucleoside-diphosphate reductase beta subunitSubName: Full=Putative ribonucleoside-diphosphate reductase beta subunit; pMT1 CDS39458 1143 - 0.525809
NA pMT061 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS53254 276 - 0.467391
NA pMT110 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS92430 147 + 0.44898
NA pMT065 pMT1 misc_feature55401 54 - 0.518519
NA pMT063 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS53991 372 - 0.497312
NA pMT038 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS35774 228 + 0.372807
NA pMT006 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS5897 633 - 0.492891
NA pMT060 pMT1 misc_feature53136 60 - 0.383333
NA pMT037 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS35039 651 + 0.394777
NA pMT021 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS22114 663 - 0.526395
NA pMT123 probable transposaseSubName: Full=Probable transposase; SubName: Full=Transposase, incomplete; pMT1 CDS101558 201 - 0.517413
NA pMT099 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS86645 234 + 0.581197
NA pMT090 putative DNA ligaseSubName: Full=Putative DNA ligase; pMT1 CDS79809 1323 - 0.523054
NA pMT104 hypothetical proteinSubName: Full=Putative cytoplasmic protein; SubName: Full=Uncharacterized protein; pMT1 CDS89176 222 - 0.536036
NA pMT093 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS81334 342 + 0.502924
NA pMT025 hypothetical proteinSubName: Full=Uncharacterized protein; pMT1 CDS26280 1257 - 0.540971
IS100 pMT1 repeat_region1 1954 + 0.51433
IS100 pMT1 repeat_region81916 1954 - 0.51433
IS100 pMT1 repeat_region61976 1954 + 0.51433
IS1541 pMT1 repeat_region37700 712 - 0.463483
IS285 pMT1 repeat_region103783 1315 - 0.488213
caf1 pMT082 F1 capsule antigenRecName: Full=F1 capsule antigen; Flags: Precursor; pMT1 CDS73340 513 - 0.42885
caf1A pMT083 putative F1 capsule anchoring proteinRecName: Full=F1 capsule-anchoring protein; Flags: Precursor; pMT1 CDS73933 2502 - 0.396083
caf1M pMT084 putative F1 chaperone proteinRecName: Full=Chaperone protein caf1M; AltName: Full=Capsule protein fraction 1; Flags: Precursor; pMT1 CDS76459 810 - 0.408642
caf1R pMT085 putative F1 operon positive regulatory proteinRecName: Full=F1 operon positive regulatory protein; pMT1 CDS77545 924 + 0.333333
parA pMT113 putative partitioning protein ASubName: Full=Partitioning protein; SubName: Full=Partitioning protein A; SubName: Full=Putative partitioning protein A; pMT1 CDS93681 1275 - 0.448627
parB pMT112 putative partitioning protein BSubName: Full=Chromosome partitioning protein ParB; SubName: Full=ParB homolog; SubName: Full=Partitioning protein; SubName: Full=Putative partitioning protein B; pMT1 CDS92713 972 - 0.447531
repA pMT057 putative replication protein ASubName: Full=Putative replication protein A; SubName: Full=RepA homolog; SubName: Full=Replication protein A; pMT1 CDS50857 1065 + 0.514554
tnp pMT043 putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase for the IS1541 insertion element; pMT1 CDS37808 459 - 0.459695
ymt pMT119 murine toxinSubName: Full=Toxin; SubName: Full=Toxin protein; pMT1 CDS98488 1764 + 0.380385