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# Yersinia pestis biovar Medievalis str. 91001, 91001

>pCD64 hypothetical protein
MSKITTLIICSKPAEIAVGHFITMSIKAILLYSYQEYGQHTDVFIQVKFN
YGMIEYKFYVNKVKFDDTPDRKLKTTIAHSSQLMGHNLTYEDYAMKKRLV
IATALCAAFYAGMKVEHFLTVDACLDAGGAMQNDIFCER
>pCD10 hypothetical protein
MAVRSVVFLLSYALLCRPYPYVDATTHLVGTRAGRYASRYRNTLPTICIS
PGKAKPPLSFATKARSRIKVLRWNKHGVWL
>pCD04 possible transposase
MMDIHIAPYRQPFTFQASVYSRRIVGSAISSSPDAELVCRAWRNALETRP
REKRLLFHSDQGGQYRSKKYRQLLWRNGVMQSMSRRGNCLDNSPMERVKV
NHQCQVAPATIDFDIADISTPHTIGLRRLKLPFQ
>pCD03 hypothetical protein
MCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQS
GYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSE
PNRVWSGYISYIKVNGGWCYLALVIDLYSFHW
>pCD02 putative ATP-binding protein
MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHE
EKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFI
ERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQ
RQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAM
ILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRK
AGVIAEANPE
>pCD59 hypothetical protein
MNSLSFHDNSIFCNKPKYSDAEVAQTLDTAQKHTLTVSKGVLDTAKQYTN
TVSSNTLDSANTYTNNKAD
>pCD05 endonuclease-like protein
MDTKLLQHTPIGTMVDYRPVNTKSGGKRLRRCPDFVIHYRMDLLVNAGIP
VRTVNSFKALHDKVIIVDGKNTQMGSFNFSQAAVQSNSENVLIIWGDFTV
VQAYLQYWQSRWNKGTDWRSSY
>pCD78 hypothetical protein
MYYSVIHNGGDMAHVTSVTLGEHLTGFVGEMIQSGRYGNISEVLRDALRL
MEAREQRVQHVRDMVLAGTNVPVSHRLMDEIFSAAVKDTSV
>pCD98 hypothetical protein
MIMTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWI
RQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSE
FPIKSLR
>pCD79 putative plasmid stabilization element ParE
MYKLSELADEDIYNIASYTIRHFGVTQAKLYHENLAKVFELLAKNPELGA
ECNWICSDIRRFQYKKHGIYYITLSNDILISRVLHQSIDIDVQDFPEHE
>pCD83 IS1222-like transposase
MDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIAL
FRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFN
GRFRDECLNEHWFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAA
WRKGNSDSEGSDITK
>pCD90 hypothetical protein
MLTFFAKYYFDLFFNKEKNRKEKEITTRLEKRISKLEKENISLRDDLIKC
KLEHIDEVMRIERSLNTQLKTNYKNNNNENLWAGIDDIIKTIECVSIESK
IGGVKTNLK
>pCD84 hypothetical protein
MASLSGWRFRVFEVASDSSFRATHLSRNIDNVRPLLAHLLYHVKVLSAQH
VDVLSGVRTSRKQHVGWSGQY
>pCD88 putative transposase
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIR
YGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHAR
PEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGD
DVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPG
KPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFHPHSS
LNNLTPAEFARSHQKGPDL
>pCD62 hypothetical protein
MGPTISSGTPVVAEKMGQFVVLLPVSDNDPQGHLHDKCH
>pCD91 hypothetical protein
MNLQNNLYSILEKVESLKNIKMLDKNNGEFTYIEGDYYFSDLTTDSLNIY
EIKYLFTFENFDFFSNGKPNEVSVYKATNSFNSVCLGIKASLNSLDVERK
ELTVQFTYSMVFDASKGIPNFSNELETSMGLLRIAPKKLSNSFKDKGIEH
NYVN
>pCD71 hypothetical protein
MIMTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWI
RQYKEEVSGMTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSE
FPIKSLR
>pCD72 hypothetical protein
MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLM
RQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFK
PSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVC
RA
>pCD57 hypothetical protein
MKRYQFTDADSSWQLDEIYIRVNGKWFYLYRAINKHGTTLDFYFSPKRNK
NTAYPFIKRVLKPYSVERQPKILNTDKHSSYGYAITRLMKEGKDTGCCKA
AASQIPE
>pCD16 hypothetical protein
MAVGRKNWLFAGSLRAGQRMASILSLLETAKLNGHDPYVWLRDVLTRLPT
WPNSQLNALLPYAENRFS
>pCD09 hypothetical protein
MRSPLAYGCSVYTVNVVTQLHNDIHKSAYKHKRLYHVLTGQASSAQPVFS
MPHRGMKAPADINYNSVDNWRR
>pCD15 putative transposase protein
MTTRHRHARPEVTALDQCWSMDFVADNLFNGHRVRALTIVDNFSRECLAL
EVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENR
VTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQE
YNHFRPHSSLNNLTPAEFARSHQKGPDL
>pCD85 probable transposase
MVKLKPFMDYIDMRLAENVWNSEVILAEIKAMGYTGGRSMLRYYIQPKRK
MRPSKRTVRVETQPGYQLQHDWGEVELEVAGQRCKVNFAVNTLGFSRRFH
VFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKAAVLKNNNGKVVFN
SGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFDSFT
HVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSYF
DIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVAS
HRLCSASSGWQTVPEHHAPLWQQVSMVEHRPLSAYEELL
>pCD65 hypothetical protein
MQHPVSFPSFSFHDNSIFCNKPIVGTMNINADHEKNLKVSIIYKIQLIGG
ITEILNGGVINWGIFNLVGYFKSSISLIKIIIIDNTNLVMLYVKIWINNE
NFLIYSELKTNELLYKPYLLNLIDIIVTM
>pCD80 hypothetical protein
MDKNKGIVFPPFSINIANIFVPDLSGANRFLACSLLEFLTYLSSVLLLML
WKILNIYIYGLMQHSRNQNIIAKRYIVYTVLFILKTANIRANPVTLSP
>pCD76 hypothetical protein
MDIQVGPWSQLLTLALDIQVGPWSQLPTLALDIQVGPWSQLPTLTLDIQV
GPWSQLPTLALDIQVGPWSQLLTLALNILVEM
>pCD12 hypothetial protein
MINTTFTELLPKIASHFGLDKLSQDEYGLCELILNDRVVIMLRADEILNR
LTLLGPILGFSGPEARSAASQLFFCYSINALNKDGPCFAWSEELGLIAFK
HLSLDELNVENVSKEIANFYDWLSLVSLPAETQQELPLHTQSTQSVKWG
>pCD97 hypothetical protein
MKRFTRRWSKPMGGMAAHWFTYQYAVPFCGRAKTLVTLSNAEGESVLISP
QQNTAQDISLFMPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDG
AVRFRQGDQEKIVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAE
GGRKRMATLHLFT
>pCD89 putative transposase
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGV
TELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
>pCD20 ORFA, putative transposase ORFA
MKKARFTETQILRVLKEVEGGRHVKDVCRENGGSEASYYNWKSKYGGMES
SDIKRMKEREEENRRLKQMYASLSLDHEILKDVVAKKL
>pCD19 ORFB, putative transposase
MRYVMTEYQASERRGCRIMGISRSLLHYCPNTARDIPVVEVLQKLAHQYP
AYGFGLMFNKLRQSGLPWNVKRVYRVYRLLKLNFRRKGKKRLPNRHPQPL
AIPLKMNHCWSVDFMSDALTDGRRFRLFNVVEILTGKHWQLKLT
>pCD18 ORFC, putative transposase
MNIPVHRVVRILERLSTERGYPAFIRSDNGPEFIAAALVEWAEHHGVILD
MYLFRSLSEVRTLTEDWRTEYNEERPHSSLGNMPPVIYARQKLDGDPHWR
WY
>pCD51 lcrG, probable Yop regulator LcrG
MKSSHFDEYDKTLKQAELAIADSDHRAKLLQEMCADIGLTPEAVMKIFAG
RSAEEIKPAERELLDEIKRQRERQPQHPYDGKRPRKPTMMRGQII
>pCD50 lcrR, hypothetical protein LcrR
MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRR
VWIVLIQRVEQRRGLKNPFAALYMLANAARAVLGPDYYLYGNVDVLAGSS
LSTQRLAHFYRRWTGAKELSTGWFSLKVSQVITLSNMKKRQNNGFA
>pCD52 lcrV, V antigen LcrV
MIRAYEQNPQHFIEDLEKVRVEQLTGHGSSVLEELVQLVKDKNIDISIKY
DPRKDSEVFANRVITDDIELLKKILAYFLPEDAILKGGHYDNQLQNGIKR
VKEFLESSPNTQWELRAFMAVMHFSLTADRIDDDILKVIVDSMNHHGDAR
SKLREELAELTAELKIYSVIQAEINKHLSSSGTINIHDKSINLMDKNLYG
YTDEEIFKASAEYKILEKMPQTTIQVDGSEKKIVSIKDFLGSENKRTGAL
GNLKNSYSYNKDNNELSHFATTCSDKSRPLNDLVSQKTTQLSDITSRFNS
AIEALNRFIQKYDSVMQRLLDDTR
>pCD08 repA, replication protein RepA-like protein
MTNHQALFTHHYRQVKNPNPEFTPREGKKTLPFCRKLMAKAEGFTSRFDF
SMHVAFARSLSLRHRMPPLLRRRAIDALLQGMCFHYDPLANRIQRSITNL
AIECGLATESKSGNLSITRATRALRFLSELGLITYQTEYDPQIGCNIPTD
ITFTPALFSALDVSDVAVAAARRSRVEWENQQREKQRLPRLEMDELIAKA
WRFVRERFRSYQTERKAHGLKRARARRDVDRTRRDIEAIVNRQLTREIAE
GRFVGNLDAVRREKARRVKERMLMSRNNNYTRLATGAT
>pCD06 repB, replication protein RepB-like protein
MSQIENAVTSSSKRAYRKGNPLTGAEKQRMSVSRKKETHKAINVFIQNDL
KNELLQLCEDSGLTQTEMIERWIQREKAARTNAA
>pCD74 sopA, putative plasmid partitioning transcription repressor
MTQEIAKSQFGNDSPAARTITRRWRITEAAELVGVTPQTIRNYEDSGKLP
PPDTAMIGRVEQRTGYSIQQINDMRDVFKTRLSKPKGENPVVLAIAAHKG
GAYKTSTSVHIAQWMALQGLRVLLIDATDPQATASLYHGYVPDLHIHEED
TLLPYYLGQRDDAAYAIKPTCWPNLEVIPSCLAVHRIESEIYGLHDQGKL
PVAPHLLLRAAIESVWDSYDVVVLDSAPNLGIGTINVVCAADVIVVPTPA
ELYDYVSTLQFFTMLRDLMSNIDLNGFEPDVRVLITKFSNAIGSQSQWMD
DQIRNAWGGMVLKEVVRVTDEVGKGQVRMRTVFEQAANQRSTPAAWRNAV
SIWEPVCAEIFNRLVKPRWENA
>pCD75 sopB, putative plasmid partitioning control protein
MGECMMKRSPVLRNAPSINFDDAKPAISNAEPSVSAPAVSQLASRVSGMK
GNTIVLPVCGRNVAFTLKVIAAPDVESKTIVFSGNERNQALLSETSLDDL
IPSFLTSGQQIPAFAREHNGNIEVADGSRRRKAAILTGSDYKVLVGNLND
EQMLWLSQIANEYRPTSAYERGLRYAQRLISEFEGNISKLAEAEHLSRKI
IQRCIKTAGLPLKTIQLFANPNELSARSGEALSKAYENNVDTLKRVTHKI
MKQKQEGRQFTTEELIVLLMPERKQPENIHKKSFGKNIEAKYSKDNVSFY
LKSVPESLVKQIEELLNTYAKEHSL
>pCD53 sycD, putative yopB/yopD chaperone SycD
MQQETTDTQEYQLAMESFLKGGGTIAMLNEISSDTLEQLYSLAFNQYQSG
KYEDAHKVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAIMD
IKEPRFPFHAAECLLQKGELAEAESGLFLAQELIADKTEFKELSTRVSSM
LEAIKLKKEMEHECVDNP
>pCD82 sycE, putative yopE chaperone SycE
MYSFEQAITQLFQQLSLSIPDTIEPVIGVKVGEFACHITEHPVGQILMFT
LPSLDNNDEKETLLSHNIFSQDILKPILSWDEVGGHPVLWNRQPLNSLDN
NSLYTQLEMLVQGAERLQTSSLISPPRSFS
>pCD87 sycH, putative yopH targeting protein SycH
MRTYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPINEKELVA
FMRAGILTGQSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINDT
SGTQLASVLTSLVDKAVTLSCEPTMKKEEDDHRPSSSHLLV
>pCD46 sycN, putative type III secretion protein SycN
MSWIEPIISHFCQDLGVPTSSPLSPLIQLEMAQSGTLQLEQHGATLTLWL
ARSLAWHRCEDAMVKALTLTAAQKSGALPLRAGWLGESQLVLFVSLDERS
LTLPLLHQAFEQLLRLQQEVLAP
>pCD66 sycT, putative yopT chaperone SycT
MQTTFTELMQQLFLKLGLNHQVNENDVYTFTFEVDGHIQVLIACYHQQWV
QLFSELGADLPTNDNLFGEHWPAHVQGRLDGKPILWSQQSLVGLDIDEMQ
AWLERFIDDIEQRKEPQNTKFQPNSTSPILFI
>pCD07 tap, putative repA translation protein
MFRKVQYLLRLLLLPCNISAGRCD
>pCD01 tnp, putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>pCD93 tnpA, putative transposase
MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRL
GIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDT
TRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFAT
AWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKR
LLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRRRDIWLK
NSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETW
RAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLP
PVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIG
LEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRW
GGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHG
IVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTAGTSDIIFGLFWLLGYQ
FSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAG
SLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDY
RRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNA
VVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLS
DDILNGELRALNFNLNNELSP
>pCD92 tnpR, putative resolvase
MVRFVCLFNRFFVIIDTSCPIFDLGYIFMRLFGYARVSTSQQSLDIQIKT
LKDAGVKANRIFTDKASGSSADREGLDLLRMKVEEGDVILVKKLDRLGRD
TVDMIQLIKEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRI
LERTNEGREEAKLKGVKFGRKRRINRKELLELHEQGMGATEIAKKMNIAR
STIYKVINESQ
>pCD45 tyeA, Yop secretion and targeting control protein TyeA
MAYDLSEFMGDIVALVDKRWAGIHDIEHLANAFSLPTPEIKVRFYQDLKR
MFRLFPLGVFSDEEQRQNLLQMCQNAIDMAIESEEEELSELD
>pCD34 virF, putative thermoregulatory protein VirF
MASLEIIKLEWVTPIFKVVEHSQDGLYILLQGQISWQSSGQTYDLDEGNM
LFLRRGSYAVRCGTKEPCQLLWIPLPGSFLSTFLHRFGSLLSEIGRDNST
PKPLLIFNISPILSQSIQNLCAILERSDFPSVLTQLRIEELLLLLAFSSQ
GTLFLSALRHLGNRPEERLQKFMEENYLQGWKLSKFAREFGMGLTTFKEL
FGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAGFSSQSYFTQS
YRRRFGCTPSQARLTKIATTG
>pCD35 virG, putative Yop targeting lipoprotein VirG
MSRIIALIISFLLVGCATPPMPAQRIVGEVRMSRPLSRIAHIDVSMFGLY
EGKVREVQRTHFETGNLPLFFSIKLNPAQRGEGELYLRSTLSFPERGVQA
VAQQKLTGKNKVVLQMIPKTCYPNCQLPNTR
>pCD54 yopB, putative Yop targeting protein YopB
MSALITHDRSTPVTGSLLPYVETPAPAPLQTQQVAGELKDKNGGVSSQGV
QLPAPLAVVASQVTEGQQQEVTKLLESVTRGAAGSQLISNYVSVLTKFTL
ASPDTFEIELGKLVSNLEEVRKDIKIADIQRLHEQNMKKIEENQEKIKET
EENAKQVKKSGIASKIFGWLSAIASVIVGAIMVASGVGAVAGAMMVASGV
IGMANMAVKQAAEDGLISQEAMKILGPILTAIEVALTVVSTVMTFGGSAL
KCLANIGAKLGANTASLVAKGAEFSAKVAQISTGISNTVGSAVTKLGGSF
AGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKA
DMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHT
V
>pCD55 yopD, putative Yop negative regulation/targeting component YopD
MTINIKTDSPIITTGSQLDAITTETVKQSGEIKKTEDTRHEAQAIKSSEA
SLSRSQVPELIKPSQGINVALLSKSQGDLNGTLSILLLLLELARKAREMG
LQQRDIENKATITAQKEQVAEMVSGAKLMIAMAVVSGIMAATSTVASAFS
IAKEVKIVKQEQILNSNIAGREQLIDTKMQQMSNIGDKAVSREDIGRIWK
PEQVADQNKLALLDKEFRMTDSKANAFNAATQPLGQMANSAIQVHQGYSQ
AEVKEKEVNASIAANEKQKAEEAMNYNDNFMKDVLRLIEQYVSSHTHAMK
AAFGVV
>pCD81 yopE, putative outer membrane virulence protein YopE
MKISSFISTSLPLPTSVSGSSSVGEMSGRSVSQQTSDQYANNLAGRTESP
QGSSLASRIIERLSSVAHSVIGFIQRMFSEGSHKPVVTPAPTPAQMPSPT
SFSDSIKQLAAETLPKYMQQLNSLDAEMLQKNHDQFATGSGPLRGSITQC
QGLMQFCGGELQAEASAILNTPVCGIPFSQWGTIGGAASAYVASGVDLTQ
AANEIKGLAQQMQKLLSLM
>pCD17 yopH, putative protein-tyrosine phosphatase Yop effector YopH
MNLSLSDLHRQVSRLVQQESGDCTGKLRGNVAANKETTFQGLTIASGARE
SEKVFAQTVLSHVANVVLTQEDTAKLLQSTVKHNLNNYDLRSVGNGNSVL
VSLRSDQMTLQDAKVLLEAALRQESGARGHVSSHSHSALHAPGTPVREGL
RSHLDPRTPPLPPRERPHTSGHHGAGEARATAPSTVSPYGPEARAELSSR
LTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCCRQTAVRADLNANYIQ
VGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPD
YFRQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVH
VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVGDDSKLRPV
IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQ
LDVLIKLAEGQGRPLLNS
>pCD14 yopJ, putative targeted effector protein YopJ
MIGPISQINISGGLSEKETSSLISNEELKNIITQLETDISDGSWFHKNYS
RMDVEVMPALVIQANNKYPEMNLNLVTSPLDLSIEIKNVIENGVRSSRFI
INMGEGGIHFSVIDYKHINGKTSLILFEPANFNSMGPAMLAIRTKTAIER
YQLPDCHFSMVEMDIQRSSSECGIFSFALAKKLYIERDSLLKIHEDNIKG
ILSDGENPLPHDKLDPYLPVTFYKHTQGKKRLNEYLNTNPQGVGTVVNKK
NETIVNRFDNNKSIVDGKELSVSVHKKRIAEYKTLLKV
>pCD60 yopM, putative targeted effector protein YopM
MFINPRNVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNA
PPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASC
NSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQ
NSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTTI
YADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL
SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERL
IASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNSERVVDP
YEFAHETTDKLEDDVFE
>pCD44 yopN, putative membrane-bound Yop targeting protein YopN
MTTLHNLSYGNTPLHNERPEIASSQIVNQTLGQFRGESVQIVSGTLQSIA
DMAEEVTFVFSERKEFSLDKRKLSDSQARVSDVEEQVNQYLSKVPELEQK
QNVSELLSLLSNSPNISLSQLKAYLEGKSEEPSEQFKMLCGLRDALKGRP
ELAHLSHLVEQALVSMAEEQGETIVLGARITPEAYRESQSGVNPLQPLRD
TYRDAVMGYQGIYAIWSDLQKRFPNGDIDSVILFLQKALSADLQSQQSGS
GREKLGIVISDLQKLKEFGSVSDQVKGFWQFFSEGKTNGVRPF
>pCD68 yopQ, putative virulence determinant protein YopQ
MGVVTMFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRT
DVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFK
KLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIK
KYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMG
>pCD67 yopT, putative cytotoxic effector protein YopT
MNSIHGHYHIQLSNYSAGENLQSATLTEGVIGAHRVKVETALSHSNLQKK
LSATIKHNQSGRSMLDRKLTSDGKANQRSSFTFSMIMYRMIHFVLSTRVP
AVRESVANYGGNINFKFAQTKGAFLHKIIKHSDTASGVCEALCAHWIRSH
AQGQSLFDQLYVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWFK
KNGISERMIERHCLLRPVDVTGTTESEGLDQLLNAILDTHGIGYGYKKIH
LSGQMSAHAIAAYVNEKSGVTFFDPNFGEFHFSDKEKFRKWFTNSFWGNS
MYHYPLGVGQRFRVLTFDSKEV
>pCD13 ypkA, putative targeted effector protein kinase YpkA
MKSVKIMGTMPPSISLAKAHERISQHWQNPVGELNIGGKRYRIIDNQVLR
LNPHSGFSLFREGVGKIFSGKMFNFSIARNLTDTLHAAQKTTSQELRSDI
PNALSNLFGAKPQTELPLGWKGEPLSGAPDLEGMRVAETDKFAEGESHIS
IIETKDKQRLVAKIERSIAEGHLFAELEAYKHIYKTAGKHPNLANVHGMA
VVPYGNRKEEALLMDEVDGWRCSDTLRTLADSWKQGKINSEAYWGTIKFI
AHRLLDVTNHLAKAGVVHNDIKPGNVVFDRASGEPVVIDLGLHSRSGEQP
KGFTESFKAPELGVGNLGASEKSDVFLVVSTLLHCIEGFEKNPEIKPNQG
LRFITSEPAHVMDENGYPIHRPGIAGVETAYTRFITDILGVSADSRPDSN
EARLHEFLSDGTIDEESAKQILKDTLTGEMSPLSTDVRRITPKKLRELSD
LLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREGGVDKDQLKSFNSL
ILKTYRVIEDYVKGREGDTKNSSTEVSPYHRSNFMLSIVEPSLQRIQKHL
DQTHSFSDIGSLVRAHKHLETLLEVLVTLSQQGQPVSSETYGFLNRLTEA
KITLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVV
KFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTVDSIPLLIQLGRS
SLMDEHLVEQREKLRELTTIAERLNRLEREWM
>pCD33 yscA, hypothetical protein YscA
MSQISTKHRTVLFRRWMAIICCLIINIAYLVY
>pCD32 yscB, hypothetical protein
MQNLLKNLAASLGRKPFVADKQGVYRLTIDKHLVMLAPHGSELVLRTPID
APMLREGNNVNVTLLRSLMQQALAWAKRYPQTLVLDDCGQLVLEARLRLQ
ELDTHGLQEVINKQLALLEHLIPQLTPFSVASRVGWN
>pCD31 yscC, putative type III secretion protein YscC
MAFPLHSFFKRVLTGTLLLLSNYSWAQELDWLPIPYVYVAKGESLRDLLI
DFSANYDATVVVSDKINDKVSGQFEHDNPQDFLQHIASLYNLVWYYDGNV
LYIFKNSEVASRLIRLQESEAAELKLALQRSGIWEPRFGWRPDASNRLVY
VSGPPRYLELVEQTAAALEQQTQIRSEKTGALAIEIFPLKYASASDRTIH
YRDDEVAAPGVATILQRVLSDATIQQVTVDNQRIPQAATRASAQAKVEAD
PSLNAIIVRDSPERMPMYQRLIHALDKPSARIEVALSIVDINADQLTELG
VDWRVGIRTGNNHQVVIKTTGDQSNIASNGALGSLIDARGLDYLLARVNL
LENEGSAQVVSRPTLLTQENAQAVIDHHETYYVKVTGKEVAELKGITYGT
MLRMTPRVLTQGDKSEISLNLHIEDGNQKPNSSGIDGIPTISRTVVDTVA
RVGHGQSLIIGGIYRDELSVALSKVPLLGDIPYLGALFRRKSELTRRTVR
LFIIEPRIIDEGIAHHLALGNGRDLRTGILAVDEISNQSTTLNKLLGGFQ
CQPLNKAQEVQKWLSQNNKSSYLTQCKMDKSLGWRVVEGACTPAESWCVS
APKRGVL
>pCD30 yscD, putative type III secretion protein YscD
MSWVCRFYQGKHRGVEVELPHGRCVFGSDPLQSDIVLSDSEIAPVHLVLM
VDEEGIRLTDSAEPLLQEGLPVPLGTLLRAGSCLEVGFLLWTFVAVGQPL
PETLQVPTQRKEPTDRLPRSRLGIGLGVLSLLLLLTFLGLLGHGLWREYN
QDGQLVEQEVRRLLATAAYKDVVLTSPKKEGEPWLLTGYIQDNHARLSLQ
NFLESHGIPFRLELRSMEELRQGAEFILQRLGYHGIEVSLAPQAGWLQLN
GEVSEEIQKQKIDSLLQAEVPGLLGVESKVRIAGNQRKRLDALLEQFGLD
SDFTVNVKGELIELRGQVNDEKLNSFNQLQQTFRQEFGNRPKLELVNVGG
QPQHDELNFEVQAISLGKVPYVVLDNHQRYPEGAILNNGVRILAIRRDAV
IVSKGKREFVIQLNGGKPR
>pCD29 yscE, putative type III secretion protein YscE
MTQLEEQLHNVETVRSITMQLEMALTKLKKDMMRGGDAKQYQVWQRESKA
LESAIAIIHYVAGDLK
>pCD28 yscF, putative type III secretion protein YscF
MSNFSGFTKGTDIADLDAVAQTLKKPADDANKAVNDSIAALKDKPDNPAL
LADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKFP
>pCD27 yscG, putative type III secretion protein YscG
MKYKLNVLLAEIALIGTGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSLM
NRGDYASALQQGNKLAYPDLEPWLALCEYRLGLGSALESRLNRLARSQDP
RIQTFVNGMREQLKT
>pCD26 yscH, putative type III secretion protein YscH
MTVTLNRGSITSLMSSSQAVSTLQPVASELKTQLENKLKSESAEKTREVL
WQQYYASNPPDHAVLEVLATPVREALLARFGQHQGSVVPAIDLPELRSVL
QQFDSFGKRWEAILLQVLEGIKPNESQVGLPYLSELINKELMILLPSNSI
VDSLLHNSHQIDMDT
>pCD25 yscI, putative type III secretion protein YscI
MPNIEIAQADEVIITTLEELGPAEPTTDQIMRFDAAMSEDTQGLGHSLLK
EVSDIQKSFKTVKSDLHTKLAVSVDNPNDLMLMQWSLIRITIQEELIAKT
AGRMSQNVETLSKGG
>pCD24 yscJ, putative type III secretion lipoprotein YscJ
MKVKTSLSTLILILFLTGCKVDLYTGISQKEGNEMLALLRQEGLSADKEP
DKDGKIKLLVEESDVAQAIDILKRKGYPHESFSTLQDVFPKDGLISSPIE
ELARLNYAKAQEISRTLSEIDGVLVARVHVVLPEEQNNKGKKGVAASASV
FIKHAADIQFDTYIPQIKQLVNNSIEGLAYDRISVILVPSVDVRQSSHLP
RNTSILSIQVSEESKGHLIGLLSLLILLLPVTNLAQYFWLQRKK
>pCD23 yscK, putative type III secretion protein YscK
MVTTQEVMMENYITSFQLRFCPAAYLHLEQLPSLWRSILPYLPQWRDSAH
LNAALLDEFSLDTDYEEPHGLGALPLQPQSQLELLLCRLGLVLHGEAIRR
CVLASPLQQLLTLVNQETLRQIIVQHELLIGPWPTHWQRPLPTEIESRTM
IQSGLAFWLAAMEPQPQAWCKRLSLRLPLATPSEPWLVAESQRPLAQTLC
HKLVKQVTPTCSHLFK
>pCD22 yscL, putative typee III secretion protein YscL
MSQTCQTGYAYMQPFVQIIPSNLSLACGLRILRAEDYQSSLTTEELISAA
KQDAEKILADAQEVYEQQKQLGWQAGMDEARTLQATLIHETQLQCQQFYR
HVEQQMSEVVLLAVRKILNDYDQVAMTLQVVREALALVSNQKQVVVRVNP
DQAGAIREQIAKVHKDFPEISYLEVTADARLDQGGCILETEVGIIDASID
GQIEALSRAISTTLGQMKVTE
>pCD21 yscM, putative type III secretion regulatory protein YscM
MKINTLQSLINQQITQVGHGGQAGRLTETNPLTENSHQISTAEKAFANEV
LEHVKNTALSRHDIACLLPRVSNLELKQGKAGEVIVTGLRTEQLSLSDAK
LLLEAAMRQDTAADG
>pCD43 yscN, putative Yops secretion ATP synthase YscN
MLSLDQIPHHIRHGIVGSRLIQIRGRVTQVTGTLLKAVVPGVRIGELCYL
RNPDNSLSLQAEVIGFAQHQALLIPLGEMYGISSNTEVSPTGTMHQVGVG
EHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGI
RVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG
REVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQ
GKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAG
QSSKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPA
IDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQD
KEADQAIERMGAIRGWLCQGTHELSHFNETLNLLETLTQ
>pCD42 yscO, putative type III secretion protein YscO
MIRRLHRVKVLRVERAEKAIKTQQACLQAAHRRHQEAVQTSQDYHLWRID
EEQRLFDQRKNTTLNCKDLEKWQRQIASLREKEANYELECAKLLERLANE
RERLTLCQKMLQQARHKENKFLELVRREDEDELNQQHYQEEQEQEEFLQH
HRNA
>pCD41 yscP, putative type III secretion protein YscP
MNKITTRSPLEPEYQPLGKPHHALQACVDFEQALLHNNKGNCHPKEESLK
PVRPHDLGKKEGQKGDGLRAHAPLAATSQPGRKEVGLKPQHNHQNNHDFN
LSPLAEGATNRAHLYQQDSRFDDRVESIINALMPLAPFLEGVTCETGTSS
ESPCEPSGHDELFVQQSPIDSAQPVQLNSKPTVQPLNPAADGAEVIVWSV
GRETPASIAKNQRDSRQKRLAEEPLALHQKALPEICPPAVSATPDDHLVA
RWCATPVTEVAEKSARFPYKATVQSEQLDMTELADRSQHLTDGVDSSKDT
IEPPRPEKLLLPREETLPEMYSLSFTAPVVTPGDHLLATMRATRLASVSE
QLIQLAQRLAVELELRGGSSQVTQLHLNLPELGAIMVRIAEIPGKLHVEL
IASREALRILAQGSYDLLERLQRIEPTQLDFQASDDSEQESRQKRHVYEE
WEAEE
>pCD40 yscQ, putative type III secretion protein YscQ
MSLLTLPQAKLSELSLRQRLSHYQQNYLWEEGKLELTVSEPPSSLNCILQ
LQWKGTHFTLYCFGNDLANWLTADLLGAPFFTLPKELQLALLERQTVFLP
KLVCNDIATASLSVTQPLLSLRLSRDNAHISFWLTSAEALFALLPARPNS
ERIPLPILISLRWHKVYLTLDEVDSLRLGDVLLAPEGSGPNSPVLAYVGE
NPWGYFQLQSNKLEFIGMSHESDELNPEPLTDLNQLPVQVSFEVGRQILD
WHTLTSLEPGSLIDLTTPVDGEVRLLANGRLLGHGRLVEIQGRLGVRIER
LTEVTIS
>pCD39 yscR, putative Yop secretion membrane protein YscR
MIQLPDEINLIIVLSLLTLLPLISVMATSFVKFAVVFSLLRNALGVQQIP
PNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLTNIESVEKFFDEGLA
PYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLPAFTVSE
LTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISLPFKLLLFVL
LDGWTRLTHGLVISYGG
>pCD38 yscS, type III secretion protein yscS YscS
MSQGDIIHFTSQALWLVLVLSMPPVLVAAVVGTLVSLVQALTQIQEQTLG
FVIKLIAVVVTLFATASWLGNELHSFAEMTMMKIQGIR
>pCD37 yscT, putative type III secretion protein YscT
MIADLIQRPLLTYTLLLPRFMACFVILPVLSKQLLGGVLLRNGIVCSLAL
YVYPAVANQPYIEVDAFTLMLLIGKEIILGLLIGFVATIPFWALESAGFI
VDNQRGAAMASLLNPGLDSQTSPTGLLLTQTLITIFFSGGAFLSLLSALF
HSYVNWPVASFFPAVSEQWVDFFYNQFSQILLIAAVLAAPLLIAMFLAEF
GLALISRFAPSLNVFVLAMPIKSAIASLLLVIYCMQMMSHASKAMLLVMD
PISLLIPVLEK
>pCD36 yscU, putative type III secretion protein YscU
MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYF
EHFSKLMLIPAEQSYLPFSQALSYVVDNVLLEFFYLCFPLLTVAALMAIA
SHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLL
SILIWIIIKGNLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISI
ADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNM
RENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAE
EEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQH
SEML
>pCD49 yscV, putative membrane-bound Yop protein YscV
MNPHDLEWLNRIGERKDIMLAVLLLAVVFMMVLPLPPLVLDILIAVNMTI
SVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQ
IVYTFGNFVVGGNLIVGIVIFLIITIVQFLVITKGSERVAEVSARFSLDA
MPGKQMSIDGDMRAGVIDVNEARERRATIEKESQMFGSMDGAMKFVKGDA
IAGLIIIFVNILGGVTIGVTQKGLAAAEALQLYSILTVGDGMVSQVPALL
IAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMLIGGVLLLLFGLIPG
FPTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPAARTK
AKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRA
LYLDLGVPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESV
SQLELLGIPYEKGEHLLPDQEAFWVSVEYEERLEKSQLEFFSHSQVLTWH
LSHVLREYAEDFIGIQETRYLLEQMEGGYGELIKEVQRIVPLQRMTEILQ
RLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYAN
GNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQVRKTIG
DLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLG
RICL
>pCD47 yscX, putative type III secretion protein YscX
MSRIITAPHIGIEKLSAISLEELSCGLPERYALPPDGHPVEPHLERLYPT
AQSKRSLWDFASPGYTFHGLHRAQDYRRELDTLQSLLTTSQSSELQAAAA
LLKCQQDDDRLLQIILNLLHKV
>pCD48 yscY, putative type III secretion protein YscY
MNITLTKRQQEFLLLNGWLQLQCGHAERACILLDALLTLNPEHLAGRRCR
LVALLNNNQGERAEKEAQWLISHDPLQAGNWLCLSRAQQLNGDLDKARHA
YQHYLELKDHNESP