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Gene list

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Gene type: CDS
Genomic element: pBCNF5603

Number of genes found: 36

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# Clostridium perfringens, F5603

>gid:1151747  PBCN01  hypothetical protein
MAREVLEQLDKKNQLLLFSSLDYDGYFINNIVDESVYVEKIVETQIMIES
VRVAIYITLILMIYNHLRYTLK
>gid:1151748  PBCN02  sensor histidine kinase
MKDLKIFPKIFIQTFSVIGIIIILMHLLIFLIFPRTYLDTRKAEIYNKAN
EISRNMNGKELNYIEQTLDFYSNTGEIKAFIKDVNDNNEVKIKKQVNINL
ESNNNSLIIEEREITINNGKKIYLQFVSTADMQKDAKNLSLKFLPYSLLI
SLLFSSIISLAYAKSIKNNIQEIKNVTDKMMKLDKKARLKLDSNDEVGQL
KEQINDLYTTLLRTIDDLKFKNKEILKLEKLKYNFFKGASHELKTPLASL
KIILENMKYNIGKYKERDIYINECIDIVDSLTKNISQILSVHSIENLNND
EEYLKINDVLEGVLKKYEVLVNQKNITINNYILDENIYIGKTALNIILSN
LISNAVKYTDANGIINIGLDRDWLYIENSYGDNKVSDIDKLFEFKFDLNK
ENSNGLGLYIVSNLLNNYNKKFKVLQNREYFVFKIKLSS
>gid:1151749  PBCN03  DNA-binding response regulator
MKILIVEDDKIIREGISEYLSEFGYIIIEAKDGREALSKFNNDINLIILD
IQIPYVNGLDVLKEIRKKSKLPILILTAFSDEEYKIDAFTNFADGYVEKP
FSLPVLKARIDSLIKKNFGQIEKFEYKNIDVNFNSYTVKINGENIYIYAK
ELEILKYLVDNEGQVLTRMQIIDNVWKETEEIPYDRVIDVYIKELRKKLK
LDCITTIRNVGYKLERK
>gid:1151750  PBCN04  putative permease
MIKNAFAYVTRKSLKSVIILLVVLAMSALSLISLSIKDATNRASEETFGN
ITSSFSMEINRQVNPGTPRGGGNVKGEDIKKISENKNIYSYVKRINSVAD
LIDHDIVETKETLANQSPERSKNFKRTVMLTGVNESSKENKFVSGAYKLI
EGKHLENQDKNKVLMHKDLAKKNNLKVGDKIKVKSNLFDADNEKGANETV
EVEIKGLFDGHNNGVVSAPQELYENTLITDINTAAKVYGNTEDTAAYQDA
TFFVKGDKNLEKVIKDIGKLDINWREYNLIKSSSNYPALQQSISGIYSIA
NKLFAGSLIFAGVVVSLLLFLWINARKKEIAVLLSLGISKLTIFGQFLIE
LIFISIPAFIGSYFLASYTGDKLGNNILNRVTGDIAKKIAKQSLSSQLGG
GAEVDGFNKTLTSLDINILPKSMMYVILFMSLVLIISLIISSYSILKKNP
KELLIDND
>gid:1151751  PBCN05  putative ABC transport system ATPase component
MDILEIKNVSYSYTNSREKVLSSVNQKFELGKFYAIIGKSGTGKSTLLSL
LAGLDKPQTGQVLFKNENIDKKGYSNHRKNNISLVFQNYNLIDYLSPIEN
IRLVNKKASESILIELGLDEKQIKRNVMKLSGGQQQRVAIARALVSKAPI
ILADEPTGNLDSATAGEIIDILKTLAKERNKCVIVVTHSKEVAEAADIIL
ELSGKKLKKVSKINSEVQ
>gid:1151752  PBCN06  putative ABC transport system permease component
MIKNAIAYITRKKNRTFIIFVILTIVFSCLYSCLSIMKSSASLEKSLYKI
SNSSLSITKKDGGYFDINQFKDIEKIKEVEETIFQYNGLAKPIKAKVVGG
EQKIERDNLPDEFKNILSLEATNKTKRNILFNSGVFTIKDGRNIEENDRR
KILVHEDFAKKNNLKLNDEISLELIEMENKGQKKEFKFEIIGIFSGKKQE
KYTGLSSDFSENMVFVDYATSQEALNRAENNKIANKILIFSSSEESTNLA
LKKIKELKIDWSKYSIEKDTNAFEESLESVSGIKHIIKIMTYSIMLGGIV
VLSLILILWLRERIYEIGILLSIGISKIKIVIQFILELIFISLPSIISTL
VLGNLLLRQIVDGFIRSDNSMIVSNSLLNKSNSILNLGTLIQSYFILISI
IILSVIVASSMILVKKPKEILSKIS
>gid:1151753  PBCN07  hypothetical protein
MLNACYSNHSFVDFVASTVSVQTIAENLTKKPFGDLLLFLLNFNFFT
>gid:1151754  PBCN08  hypothetical protein PCP34 homolog
MFSELIEKIKRNKKTSIVIIILVLIIFFLQTSISLKNQKIDYLNSSISKL
ESELKSVNLIESKK
>gid:1151755  PBCN09  conserved hyothetical protein
MAFKKKSNEERKKEVDLLVEQANKKIDKVFNSPEDIKEYLSFMSKFYNYS
FKNSILIEEQFRGARAVGSFAFWKEKGYVVNKGEKGIKILVPTKLGDRFE
AEDGTIKLVSKATEREKALIKETKLEFIPGKTLFKQGYVFDVSQTNVPLE
EIPKLFPNRWLEGRVENYKGFFNSLENLADKIGIKIIEPKSELGQVKGVS
YTFTNEVALNPRNSEIQNIKTLIHELAHAKLHTSETFLNYTQAEKEFQAE
MVAFSVSSYFNIDTEEYSLRYLKSWTKDRDFKDKERLLKEVKETTKEFIE
TIESSLLNIKEKEILIEDEAVKEFLGKDKIKINELSKTELEELIEKNNSY
TWFKIDGNKERDFKDFTGKNHVMLLKKDDSYRDIYVGKTYNLENLIYVDD
NKNLYRLKKELEVEKTNNSFFYKKNESEVLSMEYEKDINLSEDKFISDEN
RELNEKGAFKEPYITVDFCEENFFKKGEVIDLKEANERFKEAELKVRELK
REAEQREEYYPYAKTKLKLHYAPEKVIPLHFDIGDGYVNDLKEFINKELK
SAQYEDLRNSIDNTLDNKEKAFKKEVEPFYDINKLKEIPIGDIADKLGID
TVKRGNKLWCNLRGEKTASCCINIDKNYFYDFGGQPEGGDGIKFVSKAEG
ISAKDSIYRLADMFGIEPENNIDNSFKPSFHISNSDYKEIGIEPNRAMLN
VDINLERQSLAEVMELEKSCAKTMNELANDDKSTFLNILNFKSMPIVYNN
AKTYYSCIERINEYVKEYNSPIEGFNSLEVLLYKDFTKNLEEKLNKQIDI
LYRAGINERIGFDLSEEKVNLKKDLDDLFSASLSNGVEVYYNSNPDELKV
IKSIEEFRDYAIDILVPELSGFEVSEEEITKMEKEVKSWTYTDFLEFCEG
NDIEIVPLKKEKTIEIEKPVKEVRIKNKPMEL
>gid:1151756  PBCN10  hypothetical protein PCP38 homolog
MFENLAMVNEIVGENEVSVYLLEEKRDIVVKANKNYIKLLSDELNQKEED
NTMILAVDIKNKSIIEDYNYEV
>gid:1151757  PBCN11  conserved hypothetical protein
MVGVINKVKFIRNGSSKFKNFIDYIDRSEATRKKNFDKYSAYNNYMGNPE
KIGSLFTKDKHSLTEKEVKKLKKDFDKAQSNGSNMWQEVFSFDNEFLEVN
GLYDSENGALDEEKIQEATRRTMEELSKREGFKDLTWSASLHYNTDNIHV
HIASVEINPSRERGKFKPKTLYNMKSSFVNSLLDKQKDLDKINLLIRDNL
IQGKKEMSFKEDIEMRKMVKEIVQKLPSDKRQWHYNYNSMQEVRPLIDNL
TKYYIETYKKDEFKELVDRLEKEDKFYKEVYGKRKVETTTYKDNKIQDLY
TRMGNTILKEIKEYVKEEDLKSQKKFENLQERWERNKNIIITKQSISMMK
KSLNNDINSMKNQREYEKLQSSIEYDM
>gid:1151758  PBCN12  hypothetical protein PCP40 homolog
MKRQEKHYRLSNASIEHIENIKTKHSCRSNSEALELIIREHEKNLNIPME
NMIEILGDRVAEKIKASILVLKRVSNNSDRNIQVLLELMNGLFIAEDLPD
IFPSKEKEHEAYITAKKEVYKRIESQRVKKLDKEY
>gid:1151759  PBCN13  hypothetical protein PCP41 homolog
MAEVKVRGLTKEAITRIDSFAKAKGVSRNEFLKEHLESLSHSDEMRKFEA
NYRITMEKILRVLDLNTKVMKKFCDENYIDLTEIFKEEQ
>gid:1151760  PBCN14  conserved hypothetical protein
MNKESLQLKVDDLKYKFQKNGAITYYLISGVIVIILIFFLSSNALFNREA
NLISSALNKPFLVDSINVDVTNREYNPENHLIQFNLKIDNLDINTNSNLS
VELREKNNPNEIIPTKLVKVSDQDYIIYATLPEKKWSAVSLTFINKNNKT
NEIKKVKFYSDSRDISIDNNLKEQNKEGLTIELVNEEIEKVKKEIKDNDI
KIENKNKEIDNANSKISSLEKDKEYQTETEIATTDSTITSLKGQVDSLNK
DVEKIKKDNKELNDKIDKLNKKKEDLEKMVK
>gid:1151761  PBCN15  probable cell wall-binding protein
MQQQRYDFDGSDIYKYYLDLGLGDIYKQLGYSFSSVDEIWNVFLKDVRLQ
IITGAYETRHYANYVLYRKKLVPTLDYNSTENLKVINWNADENDSNFSEI
LRRIFACYNGGPGYGMSVNLDTAQNNYPNNVFKYAMEFRSKGLVNSGGIK
GDNETIEKAIEAGMKWVGKSPYVWGGGRTEADVIAGRFDCSSLVHYCYAS
AGIQLGDRSSVTTWSLLTLGKSVPKEQMKRGDLIFFDTAGRNGHVGIYLG
NGEFLNDSSTKGVSIGDLNSPYWSRYFNGNVRRIIE
>gid:1151762  PBCN16  hypothetical protein PCP63 homolog
MSTNNNANNFIQINGIMSQGYGFSPKAVMRDTRLTIEAKAIYAYMSSFAG
AGLNSFPSVKLQLSELCISEKRYYKHRKLLEDLGYITIKQTRTKLESGKV
VNDKNIYTLEQFPTPKPKKEIQKDKIKTNNKNNISENSQNDSSQNDSVQD
VGSNSISINSNNINNNNTISSSSKEVDEEDKKQIIQLLQICQNNKFKLKK
NDIKDLLTIYDFNKIAKAILTASATDTKIKNFKGYILATLNDISKIKKVE
FNINNKKTSPHANFTQRDQDYKKLEKQLLGWTE
>gid:1151765  PBCN19  hypothetical protein PCP03 homolog
MEKILAEKRINISFYKRKNGALVTTLYLPPKWLEVIGITENERECFFYIE
DKVIKISKEKQSEEAKEKTISFSKTSTKTYLNNKWLEYLGISEDDRSCII
ELRKKYITLLKDNVREILDI
>gid:1151766  PBCN20  putative chololyglycine hydrolase
MCTAITYTTKNNYFGRNFDYEISYNEKVVITPRNFPFKFRKVNDINQHYA
FIGVATVVDDYPLYYDATNEKGLSIAGLNFEGNAYYGEEVKGKLNIAPFE
FIPWILGQCSTIKEVKKLLEQINFVNINFSEKLPLSPLHWLVADKNESIV
IENLKTGLKIYDNPVGVLTNNPTFDYQLFNLNNYQNLSTQTPNNLFSKNI
NLNSYSRGMGGLGLPGDLSSMSRFVKATFTKLNSVSGDSESESISQFFHI
LGSVEQQKGLCDVGGKNYEYTIYSSCCNIDRGIYYYKTYENSQITAVDMN
KEDLESSTLFTYNLINNQIINYLN
>gid:1151768  PBCN22  hypothetical protein ORF9 homolog
MIWSKLSSSINYYINKRIWGEELLKENILLLNQYIEDAFILEDGIYKYLD
KKTYEYIDLSEEDMKKIEEAFIERLEKKRKVNKDKENFKNHMIMITDYLE
NEKSKEKSNVIELKNYRK
>gid:1151769  PBCN23  hypothetical protein ORF10 homolog
MKIAIRGGHNFLAKGACGLIDETIEDRKVYKAVIKNLIENNFEVLDVTPG
DCDVNTDLKLGVDKANNFNADLFISIHFDKCYDKFDGPLGTGTWVCEKGG
KAEIYAQNIVDTISEGTSLKNRGVKTNAKLYELNKTIMPAVIVEVCFCES
KVDVDIYREKGPDLIGYLIAKGICKSVNKEISSDLPQVNVENTTNSQNNN
LFKTNATAKVALDPRDNPSTNYKDLGEIYENERIKILAEVCDLKFFLPAT
YWQDTLNKESSPIWVNSKQTVLNVDTNATVINVLTELDARYTPSPDSNRM
GYVKNQERLFVHKIENNYALATYLASEGYKTAWFTAEYIKLD
>gid:1151773  PBCN27  hypothetical protein
MSYKDYKKAVELIEKNKEGLYKSDGASIEAINLAEEMLDLKFSKLYREFL
LSFGALSFNGEEIFGIVSSEDLTIKGEPNGIWLTLKERESSNLPNNLIVI
YNTGYSELLCLDYNNVNKENEPRVVLFVPGVDLEYQTYEVISDDLGSFLL
DRVNFALGSNLGID
>gid:1151774  PBCN28  protective antigen SpaA homolog
MVTGWKELGGIWYYLNESGAMVKGWQTISGKTYYFNDSGHMLVGKQVIDG
RNYNFNTSGQLDSTNWVKSNNKWYYYENGKMITGWKLINGEWYYLESNGV
MATGWKELGGIWYYLNESGAMVKGWQTISGKTYYFNDSGHMLTGKQVIDG
KNYEFNGSGQLISDTGDISSSDMTYIAAGEVINVQSFLNVRKGPGTNYDS
IGQLHQGDKVSIVAKNGEWYKIKYGSGYGYIHSNFINIVLDEDINKKILK
FAGNTGFFENMNLEFEFFNKRIPLGAISFSPLITVEAEISLNMKLDNGSK
INLTLTPDELTAEFLGKFNALGVTSSIDKRHLTSVFEKLTLSRNVIDGFR
YQVILGPAGTINVTFESTFEYDFGNGNKESIYQRLYFTIHPHLNPNLPSV
VRIADIDIETDETVKIEDKNIMQLIHKGIVQFVSYVHYQFSKITIPDIKP
ITPQQVSIIGSVALGVIIILACVLV
>gid:1151777  PBCN31  hypothetical protein
MVDLVNKKLKNERLFPLLIKINKKLVNGQGFANKKILKILRILNWIKVNI
>gid:1151778  PBCN32  hypothetical protein PCP27 homolog
MKSYSSREIVKIITKDGWYEVNCVGDHHQYKHPTKKGRLTIPHPKKDLPI
GTVRSIFKQAGIKIL
>gid:1151779  PBCN33  hypothetical protein PCP28 homolog
MKKKDTYIFPAIVTTESDGITITFPDLEGCITCAYSDDEIMKVSKEALGL
HLYGLETDEEIEGKELIPVPSKLNDLKLEKNQATTLVEVYMPVIRQVLDN
KSVKKTVTIPNWLDVQAKKYEINFSQLLQESIRNLLQL
>gid:1151780  PBCN34  putative penicillin acylase
MINSNYFFMYKLISINFIFDGVNEKVLAGDRLFLNACTWDKKENISKVNV
TGEDISSLGELGKGNPITAHYTFTDKIGNSVVLEPTNNGRFKVFDNTVGV
MANYPTFDWHITNLSNYIQIQGFNTLNKNTVITPISSGTGMLGLPGDYTS
PLRFVSATYLRNFIGDISDEEAPVCLFILLNSVWVPKGVERFNKYI
>gid:1151781  PBCN35  conserved hypothetical protein
MDFNRIINFSTDVGTLMLENGAETYRVEEIMSRICLAYGIEKVDVFVIPT
NIIITIKVNEMAISRTRRVNNRTINLDKISKLNNLSRNVTFNNLSIEAAE
NKLNSIANEKEYSIKIKMLGYLITSSAFTLLFGGSFKDSLFSGFIGIILC
ILEYFLNILKTNNFFINIISGALVSLLAFIAVKFNIAPNMNEIIIGSLMP
LVPGLAITNSLRDIIDGNLVAGSAKFIEAFFIAVGIAIGSAGILSILIN
>gid:1151782  PBCN36  conserved hypothetical protein
MGLIINSIYAFFSSLGFGVLFNIKGKNLIFSSLCGGLGWFIYLFSSNFIS
KSENFNYFIAAVFISLFSEVSARILKSPVLVFLVCGIIPLVPGGGMFYTM
LESLKGNTNKALAVGCNTLMLAGSIAIGIVLVSSFTKLFFSTKIFISKIK
AYKKIENKECRK
>gid:1151772  bcn  bacteriocin BCN5
MANNIIPNVSSGDLVGSTPTFPPNAVVRGDFLYLRDVDGNQIPGRTVSDG
DEITVLFISNEKNIVLVQYPTSSGYRQGYVTNATSIIKYKDDYSWVNGST
PEPVYDFDKTTQIGTLDPRERAVVLYKVDGMTYVAYDTGKGKLTKSGLVH
YEGAGSSTGGGSFNGVAPGEVVPGGFTYENNAEVVGDELYLRDANGSLIP
GRSVSVGDRITVLDVSYSKQLALVQYPAGSVVRQGYVTNATNLIRYFKQG
EWLNGSTTEPVLDENGGSLGSLSPYEAATPLYKKNGMIHVVYDTSKGPNT
KSGYVKFEGLAQLPDTSIQIPSVSHSQATVDVYGTSGKGRPLKVYKIGNG
SKVLFAGFAIHGWEDRWDNDGLALVNIANSLISKIGDYKAQNGLHGWTVY
IAPCMNPDGVIVRGTNNGPGRCAVKSRIDMNRCFPRGFTAQYNSRNYTGP
NPLGAQEAVALKEFIEKINRTADELVVIDGHGWLGCTYGDSSIAQYFTKQ
FGFSHNGPSGGGYFSYWAQGLPRTRGLLLEYPDTYSYGEVISRNYIGKTF
NAIINILKNNPNGSDVDTNTDSNYDKWVNKDGKWYYYENGKMVIGWKFVD
GEWYYLESNGVMATGWKELGGIWYYLNESGAMVKGWQTILGKTYYFNDSG
HMLVGKQVIDGRNYNFNTSGQLDSTNWVKSNNKWYYYENGKMITGWKLIN
GEWYYLESNGVMATGWKELGGIWYYLNESGAMVKGWQTISGKTYYFNDSG
HMLTGKQVIDGKNYEFNGSGQLISDTGDISSSEVTYIAVGKVINVQSFLN
VRKGPGTEYDSIGQLYQGNKVSIVAKDRDWYKIKYDSDYGFVNKKFINIL
VSSEENIKDNDVEEKKNLNVTPDKLFKTITMNKNGFDIEYEWKLMDHDNR
YHLSPVANYDNYVALKRASAIQLTPKDLLSLLISFSPIDAAKRFFRFCLW
>gid:1151775  cop  possible copy number protein
MNTIYLFSIIILIFLIMIFKSIQYYYFLKDKQNLYVLIKKKYMRFGIVLI
LLTILNLLSIFIQNKIQPVFISLLLIEIFAKNLLTVLDLIKKNFLVLNLE
QKVLRKKIFLYKIPSMYFLLILIEYTFIIYISPNIITITNIILFILVLYF
LITNKKQKPNR
>gid:1151764  parB  ParB protein
MAKKFSISEGMLNGISKNTRKVEEFKAKDNFKIDYINIDRIKRNEKNFYE
IVDIESLAEDIKLNGLNHNLVVRKLDNDMYELISGERRYTALNKLINEGN
KEFNLVPCKVIESNDIDSEIILIQANAQSRELTEVEKLTQVERLKELYKI
KKKNGEKVPGKIRDIIANDLKLSPTQVGRYERINNKLIPELKAVIEQGNL
TIANASEFSSLSEENQRVILSIIDDKTNMSKQEAVDLKNKLKKIEEEKEL
ELKKAYEEKELELKRLEEEKKNQVLKLKSENENLKKKLDNNIEEERKEIE
GQIKIEFEEKLKNEKVILEEELKSKYDKKIEDITNEVKENNLEKQRLKDE
LSKLKEKSNNEVDIKNTKENFVLVQNLKLIDNSFKDLKSQINKMKKENVK
VAEETKAKEFLEKYQKEISDLLKKL
>gid:1151776  rep  replication protein
MGNALQVNKVNYIDNVHSNSKGWITRRVIDKKGYNQWHYKYAELKDLDMN
GENIYITLNTFYKPCRRLENIKELNTLFIDLDYYKTDKTKDQVLMDLEKN
YFNQSIPIPNYVIDSGRGMYLIWLINAVPSQALPLWKAVQDHLYKQLKCF
GADRQALDATRILRVPGSINSKSKTVVNILDEYEYVYDLREIQNGFLPEL
KPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYDLKGHRELILF
LYRYYLCSFTEDIEKAKKIYQEKLKSQGKLNEKEKISQRREKIKDLLDEG
LKQKDICLLLNISKPTYVRDRNFLKEQGYINLVLFVL
>gid:1151767  resP  resolvase
MLVGYARVSTEEQSLNRQIDMLIDYGVDKRNIYQEKISGMKSNREQLDKM
IDELQKGDTVIITDLTRISRSTKDLLNIIDRIKAKGASIKSIKDTWLDTS
SDNPYNSFLLTVMSGLSQLERDLISQRTKEGLKSAKARGRNGGRPSKRND
KADTVGLLYREGYKIVDIVKQTGLSRATVYRVLNDLKLK
>gid:1151763  soj  Soj protein
MKKISVFNIKGGVAKTTSTANFGACLEEKGDRVLLVDLDPQSNLTKLFKA
YSMEDVSIADVLLDKNLDIEKVIKKTDFENIDILPSNVTLAFAERKILLD
VNRSQQNRLAKALEEIEDKYDYCLIDCPPALNMITVNALCASDEVLVPIK
IDKFALDGLEYLLDSIEEIKEEFNPNLNFKGCFITMDSSTTVNNVIKQEL
KSVLGEKMFNTSIHQNIKVVESTFEECPVVFSSKKARASLNYKDLSKEIF
>gid:1151770  uviA  UviA protein
MSELYKNIVLCQKGDKKAIEYIINKFEILINKYKMSFLKEIYFNSYDVED
NKQDLIVSLINIVNKIPIDNPQFENEGCLVNYIYKSILNSRKDMYINKNI
KRYFIESQSLSSMVEFKDKPLVKYIESNIEIEDMLKCLTEKEQKVIKYKF
LNDKSEVEIAEIMGTSRQWINRIKNTALKKLKENI
>gid:1151771  uviB  UviB protein
MDSELFKLMATQGAFAILFSYLLFYVLKENSKREDKYQNIIEELTELLPK
IKEDVEDIKEKLNK