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2024-05-16 12:13:53

Gene list

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Genomic element: pO157

Number of genes found: 83

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Escherichia coli, O157:H7
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Replication protein; pO157 CDS24745 318 - 0.584906
NA RecName: Full=Uncharacterized protein YubG; pO157 CDS40762 777 + 0.611326
NA recombinaseSubName: Full=Recombinase; pO157 CDS24316 741 + 0.577598
NA RecName: Full=Uncharacterized endonuclease; EC=3.1.-.-; Flags: Precursor; pO157 CDS70667 462 + 0.491342
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Replication protein; pO157 CDS26056 330 + 0.49697
NA SubName: Full=Plasmid pO157 DNA, complete sequence; pO157 CDS14733 822 + 0.529197
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS45724 564 + 0.586879
NA RecName: Full=Uncharacterized protein YubM; pO157 CDS47938 1959 + 0.586013
NA SubName: Full=Plasmid pO157 DNA, complete sequence; pO157 CDS87222 438 + 0.445205
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS46373 456 - 0.600877
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS68554 861 + 0.444832
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS74325 285 + 0.547368
NA RecName: Full=Uncharacterized protein YubH; pO157 CDS41411 573 + 0.623037
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS53756 432 + 0.444444
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS44316 1362 + 0.571219
NA SubName: Full=Plasmid pO157 DNA, complete sequence; Flags: Fragment; pO157 CDS79190 342 + 0.388889
NA KfrAsSubName: Full=KfrAs; SubName: Full=Uncharacterized protein; pO157 CDS27540 684 - 0.69152
NA SubName: Full=Plasmid pO157 DNA, complete sequence; pO157 CDS44034 231 + 0.575758
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS26923 621 - 0.521739
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS74609 276 + 0.485507
NA RecName: Full=Uncharacterized serine-rich protein YubK; Flags: Precursor; pO157 CDS43157 390 + 0.607692
NA resolvaseSubName: Full=Resolvase; SubName: Full=Resolvase (Protein d); pO157 CDS29208 807 + 0.568773
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS38075 903 + 0.547065
NA hypothetical 66.6 kD protein in FRWD-PPC intergenic regionSubName: Full=Hypothetical 66.6 kD protein in FRWD-PPC intergenic region; SubName: Full=Uncharacterized protein; pO157 CDS88855 1722 + 0.479094
NA SubName: Full=Plasmid pO157 DNA, complete sequence; SubName: Full=Uncharacterized protein; pO157 CDS71421 339 + 0.486726
NA SubName: Full=Plasmid pO157 DNA, complete sequence; pO157 CDS87659 1107 + 0.507678
NA SubName: Full=Plasmid pO157 DNA, complete sequence; pO157 CDS74979 207 + 0.371981
NA Lipid A biosynthesis (Kdo)2-(lauroyl)-lipid IVA acyltransferaseSubName: Full=Lipid A biosynthesis (Kdo)2-(Lauroyl)-lipid IVA acyltransferase; pO157 CDS90650 999 + 0.47047
NA reverse transcriptaseSubName: Full=Reverse transcriptase; SubName: Full=Uncharacterized protein; pO157 CDS36274 1725 + 0.470725
NA RecName: Full=Uncharacterized protein YubJ; pO157 CDS42428 423 + 0.555556
NA RecName: Full=Uncharacterized protein YubF; pO157 CDS40162 555 + 0.565766
NA hemagglutinin-associated proteinSubName: Full=Hemagglutinin-associated protein; SubName: Full=Uncharacterized protein; pO157 CDS39363 684 + 0.570175
NA RecName: Full=Uncharacterized protein YubC; pO157 CDS38981 306 + 0.647059
IS21 transposaseSubName: Full=Transposase; pO157 CDS55302 411 + 0.50365
IS3 transposase Tra5SubName: Full=Putative transposase; SubName: Full=Transposase Tra5; pO157 CDS65582 273 + 0.534799
IS3 transposase Tra5SubName: Full=Putative transposase; SubName: Full=Transposase Tra5; pO157 CDS54761 360 - 0.511111
IS600 SubName: Full=IS600 protein; Flags: Fragment; pO157 CDS75544 777 - 0.527671
IS629 SubName: Full=Escherichia coli O157:H7 insertion sequence IS1203v DNA, complete sequence, stx2cA, stx2cb genes for shiga toxin 2 variant A subunit, shiga toxin 2 subunit B; SubName: Full=IS629 protein; SubName: Full=Putative transposase; SubName: Full=Putative transposase OrfA protein of insertion sequence IS629; SubName: Full=Putative transposase encoded within prophage CP-933O; SubName: Full=Uncharacterized protein; pO157 CDS31623 327 - 0.541284
IS629 transposaseSubName: Full=Escherichia coli O157:H7 insertion sequence IS1203v DNA, complete sequence, stx2cA, stx2cb genes for shiga toxin 2 variant A subunit, shiga toxin 2 subunit B; SubName: Full=Putative transposase OrfB protein of insertion sequence IS629; SubName: Full=Transposase; pO157 CDS30736 891 - 0.539843
IS629 SubName: Full=IS629 protein; SubName: Full=Uncharacterized protein; pO157 CDS65781 504 - 0.517857
IS629 transposaseSubName: Full=Transposase; pO157 CDS79689 888 + 0.536036
IS91 transposaseSubName: Full=Transposase; Flags: Fragment; pO157 CDS75270 381 - 0.509186
IS91 transposaseSubName: Full=Transposase; pO157 CDS76062 465 - 0.546237
IS911 SubName: Full=IS911 protein; SubName: Full=Uncharacterized protein; pO157 CDS14347 342 + 0.450292
espP serine protease EspPRecName: Full=Serine protease EspP; EC=3.4.21.-; Contains: RecName: Full=Secreted autotransporter protein EspP; AltName: Full=Extracellular serine protease plasmid-encoded EspP; Contains: RecName: Full=Autotransporter protein EspP translocator; Flags: Precursor; pO157 CDS80757 3903 + 0.442993
etpC Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS2589 876 + 0.423516
etpD Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; pO157 CDS3675 1758 + 0.511945
etpE Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS5432 1506 + 0.536521
etpF Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS6939 1224 + 0.565359
etpG Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS8193 435 + 0.512644
etpH Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS8624 555 + 0.533333
etpI Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; pO157 CDS9193 348 + 0.58046
etpJ Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS9537 600 + 0.548333
etpK Type II secretion pathway related proteinRecName: Full=Type II secretion system protein K; pO157 CDS10133 978 + 0.53681
etpL Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; pO157 CDS11473 849 + 0.570082
etpM Type II secretion pathway related proteinRecName: Full=Putative type II secretion system M-type protein; Short=Putative T2SS M-type protein; AltName: Full=Putative extracytoplasmic function protein; AltName: Full=Putative general secretion pathway M-type protein; pO157 CDS12308 513 + 0.530214
etpN Type II secretion pathway related proteinRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; pO157 CDS12995 717 + 0.527197
etpO Type II secretion pathway related proteinSubName: Full=Type II secretion pathway related protein; SubName: Full=Type II secretion protein; pO157 CDS13803 402 + 0.447761
finO fertility inhibition proteinRecName: Full=Fertility inhibition protein; AltName: Full=Conjugal transfer repressor; pO157 CDS69517 561 + 0.566845
hlyA Hemolysin ASubName: Full=Hemolysin A; SubName: Full=Hemolysin toxin protein; pO157 CDS16612 2997 + 0.39306
hlyB Hemolysin BRecName: Full=Alpha-hemolysin translocation ATP-binding protein HlyB; AltName: Full=EHEC-HlyB protein; pO157 CDS19658 2121 + 0.37388
hlyC Hemolysin CSubName: Full=Hemolysin C; SubName: Full=Hemolysin transport protein; pO157 CDS16119 492 + 0.349593
hlyD Hemolysin DSubName: Full=Hemolysin D; SubName: Full=Hemolysin transport protein; pO157 CDS21782 1440 + 0.365972
katP Catalase-peroxidaseRecName: Full=Catalase-peroxidase 2; Short=CP 2; EC=1.11.1.21; AltName: Full=Peroxidase/catalase 2; Flags: Precursor; pO157 CDS76888 2211 + 0.456807
klcA antirestriction protein KlcASubName: Full=Antirestriction protein KlcA; pO157 CDS42079 303 + 0.564356
letA LetA proteinRecName: Full=Antitoxin CcdA; AltName: Full=LynA; AltName: Full=Protein H; AltName: Full=Protein LetA; pO157 CDS28682 219 + 0.506849
letB cytotoxic protein LetBRecName: Full=Toxin CcdB; AltName: Full=Cytotoxic protein CcdB; AltName: Full=LynB; AltName: Full=Protein G; AltName: Full=Protein LetD; pO157 CDS28902 306 + 0.503268
nikB NikBSubName: Full=NikB; SubName: Full=Putative nickase; pO157 CDS51715 1974 + 0.519757
papX PapX proteinSubName: Full=PapX protein; SubName: Full=Uncharacterized protein; pO157 CDS23512 285 + 0.333333
parB Stable plasmid inheritance protein (F leading maintenance protein)RecName: Full=Stable plasmid inheritance protein; AltName: Full=F leading maintenance protein; pO157 CDS51375 159 + 0.471698
psiA SubName: Full=PsiA protein; SubName: Full=Uncharacterized protein; pO157 CDS50382 762 + 0.589239
psiB SubName: Full=PsiB protein; pO157 CDS49951 435 + 0.570115
rep Rep proteinSubName: Full=Rep protein; Flags: Fragment; pO157 CDS32004 246 + 0.5
repA1 Replication proteinSubName: Full=Replication initiation protein; SubName: Full=Replication protein; pO157 CDS72556 858 + 0.575758
repA2 Replication proteinRecName: Full=Replication regulatory protein repA2; AltName: Full=Protein CopB; pO157 CDS71999 255 + 0.439216
repFIB RepFIBSubName: Full=RepFIB; SubName: Full=Replication protein; pO157 CDS25341 954 - 0.525157
sopA SopA proteinRecName: Full=Protein SopA; AltName: Full=Plasmid partition protein A; pO157 CDS32837 1167 + 0.471294
sopB SopB proteinRecName: Full=Protein SopB; AltName: Full=Plasmid partition protein B; pO157 CDS34003 972 + 0.459877
ssb single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; pO157 CDS47130 453 + 0.584989
tagA ToxR-regulated lipoproteinRecName: Full=Metalloprotease StcE; EC=3.4.24.-; AltName: Full=Mucinase; AltName: Full=Neutral zinc metalloprotease StcE; AltName: Full=Secreted protease of C1 esterase inhibitor from EHEC; Flags: Precursor; pO157 CDS1 92721 + 0.475998
toxB Toxin BSubName: Full=Toxin B; pO157 CDS55981 9510 + 0.313985
traI helicase ISubName: Full=Helicase I; Flags: Fragment; pO157 CDS66314 1416 + 0.617938
traX TraX proteinSubName: Full=Acetylase for F pilin; SubName: Full=TraX protein; pO157 CDS67749 747 + 0.580991