TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-02 05:45:34

Gene list

Applied filters:

Genomic element: LSv54, large plasmid

Number of genes found: 101

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfotalea psychrophila LSv54, LSv54
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DPPB35 hypothetical proteinLSv54, large plasmid CDS35980 600 - 0.371667
NA DPPB92 probable transposase (partial length)LSv54, large plasmid CDS113432 534 - 0.447566
NA DPPB01 related to transcriptional repressor protein TrfALSv54, large plasmid CDS2020 1074 - 0.373371
NA DPPB20 probable conjugal transfer protein TrbILSv54, large plasmid CDS21388 1248 + 0.465545
NA DPPB48 hypothetical proteinLSv54, large plasmid CDS49189 879 + 0.441411
NA DPPB19 hypothetical proteinLSv54, large plasmid CDS20950 438 + 0.360731
NA DPPB13 probable conjugal transfer protein TrbCLSv54, large plasmid CDS13830 327 + 0.382263
NA DPPB37 probable acetyl-CoA synthetaseLSv54, large plasmid CDS37566 1776 + 0.586712
NA DPPB99 hypothetical proteinLSv54, large plasmid CDS119123 282 - 0.453901
NA DPPB66 related to transposase (partial length)LSv54, large plasmid CDS81202 114 - 0.280702
NA DPPB98 probable dihydrofolate reductaseLSv54, large plasmid CDS118110 600 + 0.395
NA DPPB88 hypothetical proteinLSv54, large plasmid CDS108016 612 - 0.405229
NA DPPB28 hypothetical proteinLSv54, large plasmid CDS29027 1713 + 0.314069
NA DPPB51 probable transposase (partial length)LSv54, large plasmid CDS51737 441 + 0.47619
NA DPPB84 related to capsular polysaccharide biosynthesis proteinLSv54, large plasmid CDS104165 759 - 0.511199
NA DPPB04 unknown proteinLSv54, large plasmid CDS4608 1359 + 0.48933
NA DPPB26 related to TrbM protein (partial length)LSv54, large plasmid CDS27377 291 + 0.426117
NA DPPB18 probable conjugal transfer protein TrbGLSv54, large plasmid CDS19963 987 + 0.389058
NA DPPB83 hypothetical proteinLSv54, large plasmid CDS102625 1572 - 0.505089
NA DPPB22 related to DNA primase TraCLSv54, large plasmid CDS22900 2082 + 0.442363
NA DPPB67 unknown proteinLSv54, large plasmid CDS81334 312 - 0.448718
NA DPPB72 related to glycosyltransferase (PssD)LSv54, large plasmid CDS87130 435 - 0.342529
NA DPPB08 hypothetical proteinLSv54, large plasmid CDS10597 96 + 0.375
NA DPPB46 conserved hypothetical proteinLSv54, large plasmid CDS48172 288 - 0.357639
NA DPPB94 probable transposase (partial length)LSv54, large plasmid CDS115473 543 - 0.45488
NA DPPB87 hypothetical proteinLSv54, large plasmid CDS107330 264 - 0.378788
NA DPPB73 conserved hypothetical proteinLSv54, large plasmid CDS88110 1068 - 0.418539
NA DPPB52 probable transposase (partial length)LSv54, large plasmid CDS52065 261 + 0.478927
NA DPPB69 related to phosphotransbutyrylase (partial length)LSv54, large plasmid CDS82903 789 - 0.410646
NA DPPB100 probable transcription regulatorLSv54, large plasmid CDS119481 1197 - 0.401838
NA DPPB85 related to exopolysaccharide biosynthesis protein (GumC protein)LSv54, large plasmid CDS104923 1398 - 0.476395
NA DPPB36 unknown proteinLSv54, large plasmid CDS36781 255 - 0.490196
NA DPPB93 probable transposase (partial length)LSv54, large plasmid CDS114049 1362 - 0.477974
NA DPPB64 probable UDP-glucose 4-epimeraseLSv54, large plasmid CDS79178 1050 + 0.484762
NA DPPB89 hypothetical proteinLSv54, large plasmid CDS108602 990 - 0.486869
NA DPPB57 related to TraI protein (partial length)LSv54, large plasmid CDS72794 891 - 0.407407
NA DPPB25 probable conjugal transfer protein TraF precursorLSv54, large plasmid CDS26858 450 + 0.426667
NA DPPB86 related to capsular polysaccharide export proteinLSv54, large plasmid CDS106467 858 - 0.5
NA DPPB56 hypothetical proteinLSv54, large plasmid CDS57820 14178 - 0.494992
NA DPPB58 related to TraJ proteinLSv54, large plasmid CDS73703 333 - 0.375375
NA DPPB71 related to glycosyltransferase (PssE)LSv54, large plasmid CDS86657 477 - 0.339623
NA DPPB34 similar to maturase (partial length)LSv54, large plasmid CDS35434 300 - 0.346667
NA DPPB61 conserved hypothetical proteinLSv54, large plasmid CDS75099 1149 + 0.440383
NA DPPB82 related to polysaccharide transport proteinsLSv54, large plasmid CDS101372 1257 - 0.514718
NA DPPB70 probable UDP-glucose 6-dehydrogenaseLSv54, large plasmid CDS84297 1341 - 0.472036
NA DPPB24 probable TraG protein, C-terminal partLSv54, large plasmid CDS26445 417 + 0.455635
NA DPPB54 conserved hypothetical proteinLSv54, large plasmid CDS53294 1728 - 0.391782
NA DPPB91 related to UDP-galactose-lipid carrier transferaseLSv54, large plasmid CDS111030 1443 + 0.431046
NA DPPB11 hypothetical proteinLSv54, large plasmid CDS12491 381 + 0.393701
NA DPPB101 unknown proteinLSv54, large plasmid CDS121210 255 - 0.396078
NA DPPB38 probable pyruvate dehydrogenase, E1 component, alpha subunitLSv54, large plasmid CDS39338 1008 + 0.60119
NA DPPB80 related to F420H2-dehydrogenase, beta subunitLSv54, large plasmid CDS99002 1332 - 0.487237
NA DPPB76 related to capsular polysaccharide biosynthesis proteinLSv54, large plasmid CDS92274 1143 - 0.286964
NA DPPB33 unknown proteinLSv54, large plasmid CDS34389 882 - 0.38322
NA DPPB06 unknown proteinLSv54, large plasmid CDS8746 381 + 0.341207
NA DPPB49 hypothetical proteinLSv54, large plasmid CDS50069 339 - 0.528024
NA DPPB78 conserved hypothetical proteinLSv54, large plasmid CDS94678 1083 - 0.33518
NA DPPB16 probable conjugal transfer protein TrbLLSv54, large plasmid CDS17813 1434 + 0.401674
NA DPPB23 probable TraG protein, N-terminal partLSv54, large plasmid CDS24978 1434 + 0.423989
NA DPPB74 probable glycosyltransferaseLSv54, large plasmid CDS89524 990 - 0.254545
NA DPPB29 hypothetical proteinLSv54, large plasmid CDS32286 696 + 0.311782
NA DPPB53 probable transposase (partial length)LSv54, large plasmid CDS52394 255 + 0.4
NA DPPB44 related to TraJ proteinLSv54, large plasmid CDS45057 354 - 0.398305
NA DPPB90 related to capsular polysaccharide biosynthesis proteinLSv54, large plasmid CDS109631 639 - 0.42723
NA DPPB50 probable transposase (partial length)LSv54, large plasmid CDS50600 858 + 0.41958
NA DPPB15 probable conjugal transfer protein TrbJLSv54, large plasmid CDS16825 864 + 0.390046
NA DPPB60 related to transcription regulator proteinsLSv54, large plasmid CDS74837 258 + 0.445736
NA DPPB32 unknown proteinLSv54, large plasmid CDS33721 645 - 0.375194
NA DPPB30 unknown proteinLSv54, large plasmid CDS33037 315 + 0.31746
NA DPPB03 related to plasmid partition protein ParALSv54, large plasmid CDS3512 642 - 0.428349
NA DPPB96 probable transposition resolvaseLSv54, large plasmid CDS116449 561 - 0.483066
NA DPPB47 conserved hypothetical proteinLSv54, large plasmid CDS48460 330 - 0.360606
NA DPPB75 related to polysaccharide biosynthesis proteinLSv54, large plasmid CDS90488 1083 - 0.240074
NA DPPB07 unknown proteinLSv54, large plasmid CDS10291 273 + 0.465201
NA DPPB31 hypothetical proteinLSv54, large plasmid CDS33345 372 + 0.346774
NA DPPB43 related to TraI protein (partial length)LSv54, large plasmid CDS44056 1005 - 0.40398
NA DPPB10 probable conjugal transfer protein TraLLSv54, large plasmid CDS11780 711 + 0.405063
NA DPPB63 hypothetical proteinLSv54, large plasmid CDS77713 1134 + 0.506173
NA DPPB40 probable pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferaseLSv54, large plasmid CDS41360 1194 + 0.619766
NA DPPB62 conserved hypothetical proteinLSv54, large plasmid CDS76240 687 + 0.423581
NA DPPB02 unknown proteinLSv54, large plasmid CDS3109 387 - 0.395349
NA DPPB68 probable UTP-glucose-1-phosphate uridylyltransferaseLSv54, large plasmid CDS81927 867 - 0.525952
NA DPPB42 Predicted orfLSv54, large plasmid CDS42879 1017 + 0.484759
NA DPPB17 probable conjugal transfer protein TrbFLSv54, large plasmid CDS19288 666 + 0.394895
NA DPPB14 probable conjugal transfer protein TrbELSv54, large plasmid CDS14157 2715 + 0.41768
NA DPPB09 hypothetical proteinLSv54, large plasmid CDS11415 348 + 0.373563
NA DPPB79 conserved hypothetical membrane proteinLSv54, large plasmid CDS97293 1545 - 0.513269
NA DPPB21 unknown proteinLSv54, large plasmid CDS22610 291 + 0.450172
NA DPPB55 hypothetical proteinLSv54, large plasmid CDS55523 2298 - 0.436466
NA DPPB97 probable transcriptional regulatorLSv54, large plasmid CDS117456 675 - 0.405926
NA DPPB95 probable transposase (partial length)LSv54, large plasmid CDS116046 402 - 0.470149
NA DPPB77 related to glycosyltransferaseLSv54, large plasmid CDS93428 1149 - 0.299391
NA DPPB41 Predicted orfLSv54, large plasmid CDS42550 246 + 0.52439
NA DPPB27 unknown proteinLSv54, large plasmid CDS28199 279 - 0.458781
NA DPPB59 unknown proteinLSv54, large plasmid CDS74536 276 - 0.434783
NA DPPB39 probable pyruvate dehydrogenase, E1 component, beta subunitLSv54, large plasmid CDS40342 1026 + 0.607212
NA DPPB45 hypothetical proteinLSv54, large plasmid CDS46708 981 + 0.491335
NA DPPB65 related to transposase (partial length)LSv54, large plasmid CDS80484 582 - 0.455326
NA DPPB12 probable conjugal transfer protein TrbBLSv54, large plasmid CDS12879 942 + 0.418259
NA DPPB05 probable reverse transcriptase/maturase family proteinLSv54, large plasmid CDS6170 1320 - 0.449242
NA DPPB81 related to transcriptional activatorsLSv54, large plasmid CDS100747 582 - 0.457045