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2024-05-05 16:21:49

Gene list

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Genomic element: pPBPR1

Number of genes found: 67

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRC0001 putative sex pilus assembly and synthesis protein (TraY) [Photobacterium profundum SS9]pPBPR1 CDS317 393 + 0.323155
NA PBPRC0011 putative sex pilus assembly and synthesis protein (TraU) [Photobacterium profundum SS9]pPBPR1 CDS9108 1005 + 0.510448
NA PBPRC0048 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS59613 360 - 0.358333
NA PBPRC0036 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS46078 663 - 0.408748
NA PBPRC0003 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS1503 273 + 0.564103
NA PBPRC0029 putative Endonuclease I [Photobacterium profundum SS9]pPBPR1 CDS36895 849 - 0.479388
NA PBPRC0050 putative transposasepPBPR1 CDS61899 645 - 0.44186
NA PBPRC0019 putative conjugative transfer protein (TraD) [Photobacterium profundum SS9]pPBPR1 CDS19147 2106 + 0.48623
NA PBPRC0012 hypothetical conjugative transfer protein trbC [Photobacterium profundum SS9]pPBPR1 CDS10303 705 + 0.50922
NA PBPRC0053 putative transposase [Photobacterium profundum SS9]pPBPR1 CDS64523 396 + 0.494949
NA PBPRC0058 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS70380 1035 - 0.330435
NA PBPRC0047 Predicted orfpPBPR1 CDS59286 309 - 0.417476
NA PBPRC0054 conserved protein of unknown functions [Photobacterium profundum SS9]pPBPR1 CDS65355 1026 - 0.308967
NA PBPRC0049 gi|11344926|gb|AAG34553.1| putative cyclopropane fatty acid synthase [Photobacterium profundum]pPBPR1 CDS61198 615 + 0.42439
NA PBPRC0017 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS18222 480 - 0.429167
NA PBPRC0052 Putative site-specific recombinase, resolvase family [Photobacterium profundum]pPBPR1 CDS63869 633 + 0.406003
NA PBPRC0021 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS22182 1161 - 0.541774
NA PBPRC0002 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS917 285 - 0.396491
NA PBPRC0051 Predicted orfpPBPR1 CDS63001 306 - 0.388889
NA PBPRC0045 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS57943 297 - 0.427609
NA PBPRC0063 stabilization protein ParE, putative [Photobacterium profundum SS9]pPBPR1 CDS75119 303 + 0.429043
NA PBPRC0038 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS47819 417 - 0.386091
NA PBPRC0064 hypothetical KrfA protein [Photobacterium profundum SS9]pPBPR1 CDS75589 1014 + 0.440828
NA PBPRC0018 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS18779 372 + 0.513441
NA PBPRC0035 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS44619 1428 - 0.416667
NA PBPRC0006 putative sex pilus assembly and synthesis protein (TraB) [Photobacterium profundum SS9]pPBPR1 CDS3379 1470 + 0.520408
NA PBPRC0024 Predicted orfpPBPR1 CDS30909 459 - 0.394336
NA PBPRC0062 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS74859 261 + 0.402299
NA PBPRC0020 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS21670 495 + 0.454545
NA PBPRC0037 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS46753 1026 - 0.41423
NA PBPRC0005 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS2651 735 + 0.533333
NA PBPRC0041 unknown protein [Photobacterium profundum SS9]pPBPR1 CDS51581 288 + 0.40625
NA PBPRC0032 Predicted orfpPBPR1 CDS39908 294 - 0.540816
NA PBPRC0025 putative antirestriction protein [Photobacterium profundum SS9]pPBPR1 CDS31938 978 - 0.45092
NA PBPRC0004 hypothetical sex pilus assembly and synthesis protein (TraE)pPBPR1 CDS2007 648 + 0.507716
NA PBPRC0043 putative exonuclease[Photobacterium profundum SS9]pPBPR1 CDS54028 1998 + 0.386386
NA PBPRC0008 putative sex pilus assembly and synthesis protein (TraC) [Photobacterium profundum SS9]pPBPR1 CDS5259 2589 + 0.504442
NA PBPRC0061 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS73628 651 + 0.356375
NA PBPRC0065 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS77016 276 + 0.358696
NA PBPRC0027 putative partitioning protein BpPBPR1 CDS34750 1086 + 0.387661
NA PBPRC0059 putative transposase [Photobacterium profundum SS9]pPBPR1 CDS71507 738 - 0.471545
NA PBPRC0039 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS48251 549 - 0.398907
NA PBPRC0028 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS36432 348 - 0.554598
NA PBPRC0055 putative transposase [Photobacterium profundum SS9]pPBPR1 CDS66987 492 + 0.457317
NA PBPRC0046 Predicted orfpPBPR1 CDS58879 264 + 0.344697
NA PBPRC0030 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS37791 495 - 0.442424
NA PBPRC0023 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS29463 387 - 0.405685
NA PBPRC0016 putative sex pilus assembly and mating pair (TraG) [Photobacterium profundum SS9]pPBPR1 CDS15384 2835 + 0.507584
NA PBPRC0042 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS51938 954 - 0.385744
NA PBPRC0066 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS77981 894 - 0.47651
NA PBPRC0015 putative Thiol-disulfide isomerase [Photobacterium profundum SS9]pPBPR1 CDS13611 441 + 0.498866
NA PBPRC0014 hypothetical sex pilus assembly and synthesis protein (TraF) [Photobacterium profundum SS9]pPBPR1 CDS12808 792 + 0.518939
NA PBPRC0057 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS68271 1749 + 0.292739
NA PBPRC0067 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS79373 285 + 0.340351
NA PBPRC0013 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS11009 1803 + 0.499168
NA PBPRC0056 Predicted orfpPBPR1 CDS67811 324 - 0.422839
NA PBPRC0040 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS48841 2478 - 0.409201
NA PBPRC0031 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS38487 582 - 0.412371
NA PBPRC0022 putative DNA helicase (TraI) [Photobacterium profundum SS9]pPBPR1 CDS23492 5943 + 0.502272
NA PBPRC0060 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS72364 414 + 0.311594
NA PBPRC0026 putative partitioning protein A [Photobacterium profundum SS9]pPBPR1 CDS33557 1191 + 0.398825
NA PBPRC0007 hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS4860 396 + 0.525253
NA PBPRC0009 Predicted orfpPBPR1 CDS7943 417 - 0.489209
NA PBPRC0010 hypothetical sex pilus assembly and synthesis protein (TraW) [Photobacterium profundum SS9]pPBPR1 CDS8406 699 + 0.496423
NA PBPRC0033 hypothetical inner membrane protein [Photobacterium profundum SS9]pPBPR1 CDS43366 309 - 0.423948
NA PBPRC0044 putative helicase[Photobacterium profundum SS9]pPBPR1 CDS56032 1719 + 0.344386
NA PBPRC0034 conserved hypothetical protein [Photobacterium profundum SS9]pPBPR1 CDS43683 921 - 0.449511