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# Rickettsia felis URRWXCal2, URRWXCal2; California 2

>RF_pd59 unknown
MEINGKKAKIYYSDSASADGPDYAIIDISSKKAKYKKATYDTSNPSSSHS
DDHERMELINSSDNSIQDNINVISYSIVSAAANKTDYINTSSKRDR
>RF_pd01 Transposase
MPYKERAKTGLPRNVDKPKYKVTNWSQYNKSLRQRGMISLYFPEGDLESL
FINVEPYVEGESGRATTYQVPYIQLIYTLYRLFGFGQRQITGYLWFIFAD
SIRGQTVLQ
>RF_pd05 unknown
MQLFYPLGLPSENIGIHGFHDTTKNQPQSYIPITGCVLSHILSCSRLSSL
EKMYFILADSLICINSSKGRNRSIALPATSWAERLSCSKSKVFILQKSLE
DKGYFIIYRDKNDQGQNNRNTITTTIPDHVFSDLKYEPDRFNLNSDSDIE
TQSTNHSQSDNLDSIDKTFIPTLEGKRQHLAKTKMFIRVPYKFLKELNSN
CNISATSKVVLLHLFTKMYKSSVCKYDYNCFGSRYDYGNAVDYLTQNSNS
IVTSYQELQQELKLHRNSLTKALQTLETANLIKRGQIVIKNDNYYNSRAD
KSLWRISLVNALRITNDSTLHEQKGQIGYDEQEERFDKTQLLISTSNTTI
RTNDQKNDTGKNRVRESFSEKGCTKHDPPCTDSGQLYIKYFIVNNNINKN
IDYIDVKSEEEFLENELCSFPSESYNNSFKSSIKAKPSCSNTTSESAART
IKNTSEYKELRNFYPLSEQDVDTLNFRAGREFSNNFMNQLLLKLYIKYPE
KRFKNKFSFLSYMEKILKNEKHQGPLVNHTTFRFSCNIGAIEKNLLEYEK
YLNQIESSFDTSKDMQIRKKIAGRFSTNVAYEILKEVEFKTNNDNSFILA
LVPNQLALSERQIATLSEQLEAVYGINGYYVTVLEGDVNPEDVEYAERSR
GKKEIAIGVNNEMIYPKTAVFDNVENDTPIDIPASNSVVNTTNENTVWNQ
IRKGLREELGEAVDETWFSKAEAKECKETKTLTLTMPTRFMSDWVRNNYS
HVIRGLSEGYKINYKFKEVFKCHY
>RF_pd07 Type I restriction-modification system methyltransferase subunit
MSPIETLVKPSILNTIVAKLDDLHLSATHSDIKGDAFEYFLRNYGGADTD
FGEYFTPRHIVTALVNLLDPKFGEKVYDPFCGTGGMLITSYKHIYDNLSL
RTPENIQRLKKQTVYGGEITKMYRIAKMNMILAGDGHSNIVRQNSYGTPD
TIKQIDVIKDGFVTKENIKIKYDVVISNMPFGRKMKTEHAGLYGFNTRSA
EITGVLHCLNSLNNNENARLGLIVPEGILFDKRELISIRSISLSDALISS
SSPVNLYICLVILLILSLILCVLPLSPITAILLSASSSILIAATPRMILL
LFLIISSSINFLVLDNAVNLTSKHYNINWICY
>RF_pd40 unknown
MREWKRDIEAVGNITRLHSKILSQATNLKSIKLDDTSAATSFELDLNIKD
LKIDPYSIALSEVQDSFKYVIENILKEAREEKSESAYSSKQDSLEPKAIK
GITNIDGKACINFKELDSKHQSKIIAICLKESTFENLKEIFEELKLEKEV
LRDYASVICDSYSSVVSAEDAKEFNKLIFAKKDESKLVTESKVELRALVR
EQNFSKSEERKTQLEEQITIVKEQSAQHDEKLVEIAGRISNRLSLIKEHT
TLDSSSVLMGERTIQLNINYETLRKHAGYDMAEYEAGSFKKKLIICAAAF
AMLVASCCISSYIVYKKFPGRIQMRHDGPMHVENSSVMLHYPTIGKIDGT
NNKKIGK
>RF_pd50 unknown
MKRVCMSKLLGGWSMSLTRYPFNEFDYIMYGMVTNLEELTTGSMASPGWS
PENEQKPDNNPCFTGKRLWVYGGGGCAPEEKPSSMNDVSRIISATINNGW
DGVDFDDECNMNTAFVIKTMEKLKENSKETSFGFIAGYSYNHPNTEKGKK
ITDKVKAIIASGQCDRLVHYCYAAAMWNQNDIINNVKQALVQSISYGIEQ
DKIVLALTTLGLTDWNLNYFLDQIIDLNLGGLFIWRYDELTPNHYKIIKK
RLNKLY
>RF_pd42 Ankyrin repeat
MHHLIDQLKSKNNIFYIRALVPMIVLCVLLISKTVYGYDTKLEHLCKAIS
NNNIDLVKQAQQKSQYNQRCIQERETPLILAISNNNIKVVQMLLDFGVDI
EQEGRYGGAALYNAICHDTNIVKLLIKHGANINKRLSEGSRETPLIKATK
CFENGSIANTEHIKILLKYGADINAKDVNGITALKMAEMQNDQSAINLLR
SSGKK
>RF_pd63 unknown
MGGSNAADRVNWSQLQFQWRDAIIWPDNDQPGFKAAEVIKDKINKANEHI
GFVSVVDPRRLQFGGSTHKDLLPEKWDQEKSSHYIKYLEATGKGGVAHDY
LKYDSIMYQDILTSLAMRDERLSKSIKELSDSNNTSDIETIEHRTKLIDD
TQNLYEKKALEYSGIAGTNVVYRGHLELMVKNYGESHEKVT
>RF_pd44 Putative conjugative transfer protein TraD_F
MNIQEQGRFTRGAQIFAHQIRMLTQGITNALTVSLTASCMWLIFRILQKI
NILSLYYYCIECYVQLKLAVGQYFYDISQIGITFYDVKRQEWIYRSAEDF
IHKFWYVTKHGTQITSFGSWLAGSAAFEVLGVFALTMPGITIFFWYRGIK
TIGSQKLRGMDYVQASELTKILSKEKVASNIKFAGLPIVKDSERQHILIT
GTTGTGKTNMLNELLPQIRSNNEKAIIVDMTGSYVNKFYDPSNGDIILNP
FDSRTSNWLPWNDIVDTEDFDDLASHFSSNNGMGRASFFDRTAELVLAEA
LKKYAVSRD
>RF_pd53 DNA polymerase III, epsilon subunit-like protein
MIRLKFLEEVDIIIAHNAAFDRPFFDKMFPEVITKVWGCSRVDIDWKAEK
IESHKLEYLTYKYNFFYEGHRAVIDCRAGLHLLAQTLPITKTLVLKQLLN
NCHKTRFNVWVHNAPYDSKDLLKSRGYRWSINPQANYKAWMIEVFEDTLE
TELTFLNSNVYKTPYNIPVQTINPCDRFMG
>RF_pd09 unknown
MSSLIHVTIITIILYVPKNKHITISDLSIYDGITLVPKSGVYSKMDETRV
FNKEAFETIELEINPPDTSSNASDDSDGISSTSDQLSSDSSSVLCSSCCS
SLDISDFLSSDDDMDLTGNNAADLANN
>RF_pd56 Hyaluronidase
MNIFSLDTFSYGIIMGYYGPVWSNEVLIEYADFCKKYGYKYFIYAPKMDK
LLRDNWNIFFTESRVQELKNIRDTFEEKGVAFGIGLSPLGLNNLKDIEKV
EKVLQQKITQINNINPTILGIFFDDINKDSIVPDLGVGQVQVAEYIAQRS
NAQNFASVPSYYSNDQILQRVLGPTPESYFADFSQLDQKFSIFWTGEHIM
SDGYSQKELDNISNKLGRKVLIWDNYPVNDPTYLKDHLRISGIDRPQELS
SWTPSIAFNPMIQPNMSKIPLSTAQCLFSSEKYNKREIYIEKLIELCGKD
LAQAIDQNLPYFELNGINRTETSNIKRMKELFSLFAEINEQQYTHEIIKL
LGGSQEI
>RF_pd64 Transposase
MTYSMSWIILNEKLMAKAYSYDLRIRVIKSLTEGKTIKETSEIYSISRKT
IIEWKELKKQTGDVKAKSGYHTGHRRIIRDIEGFKKFIELNFDKTTMELA
NN
>RF_pd68 unknown
MAKGWIKEQEESLITQILAGKFYHNLSNEIPCDSLPVLQSPSNTQYWGNE
NPSVSSVLLADIVASCNKKQDNLAGAATFFPFIDSSYALPDSIVPASYSF
ATKNGMTLFGDYQYGAHRYFKEQLVFGPEDCSTAVGKATYLTTDQIKDIN
TTNMQAAYEASIETGSPDPKYHYQAVTFLSGDIQDSQLRLIQEGDIYLVK
GHTALIATKPDSRSTITTIQFNRDIDSAENKILGGGTYDYNLCDKAKEIK
TGIYILRPTTVQPLHKSYSLGELLNQIDSKYLTLFPDGPTNISGDCRIFL
EDNTTNIVGDTGYSTGQF
>RF_pd61 Transposase
MTNEEHNQRQQQTDVSTNGDANDTTAERPRHDELFKKVMSEPVAAREFLE
HYLPASFKNKINLNSIKIEKESFVTEDLRKRFSDVVYSVSLNKNNIKDST
TGSANNDKAYVYVLIEHQSSSDYWIAFRLWQYMLLLCKRHKDANKNKSNA
AAEKDNKLPLICPIVVYANDKLYNAPRSFWELFEDCKTAKEMMGGEYLLV
DLQKQSDDEIEQKKHLGMIEYMLKHIKARDILNLWQSLLEKFESSIEIDK
ENGYIYIKWLLWYSDAKVSEDKQVELAKIIAKHLNKADQEGLMRTIADKY
IDEGVQKGMVQGMQIGRNEGMQIGEARGMQIGEAKRTMEVAKNMLNAGSD
ISFISKVTGLSISELNQLLKS
>RF_pd39 Conjugative transfer protein TraA_Ti
MERSRSKRKRADSRTASEIEFSLPREVSKELNISLVEKYVNEYIVARGVV
CDVNIHYDNPDNPHVHIQYLTRKLERLENGEVVLGKTKNRELESTKFLYF
LRDRCEIEINKVYEEAGLPYRVTAKSFETLGIDQIPKLHIGPAHHMPATE
LEAKNKEIIAENAKKIYESPEIVFGRISYTKPVFTKEDIAIALSDALMVH
LVSKGSDIAKEQEAIRAFGKGLVNEQAGDGNTEQNIVNDAVGTAAGGGAE
NTDSSQVKETTNNPAIEHLNKEYGEEFLRLYNQLLVSDKIELMDQKDLMG
RTLYSLKSRVNLERRYVSAIEELNTKGEHKLNILDNTIGERNSLKEQIGD
LVNVVGANLQNKFNDKLGSGLGLKLNVFGSKKHAFSDEQIKAILSVCSGS
DISVLEGNPGAGKTFVMKEIVRQYKAAGFKVVGTGPSSVSAKVLSRNAGI
KADNTSLLRKKIVESKGGDFKIDLSSKYYEEEEYLKSIGCDSILNFLRSD
VLDSKTVLIVDEASMIELANMDYLAHEVLRSKAKLVLVGDNNQFTAVGMT
GAFNKARKIAGGVKLTEVRRQERVEYRQATRAMGRFAMQEAIEIYRKLDV
FNIKDNEQEAKTSLVTSFAKEYTEQIDNLKRDDLIAIRSIAIGAYTNEKV
ADNTRVRSELKHSGALKGTEVQISSGGRMLSLMKGDRIVFEENSLRYGIS
NGEVGTILSVKPSVKSFSGGASSKGESDGDGLLKILVHKADGSKDIINID
TASDAANNKWRIKLNHGYALTGYKLQGETVDRMHVYFDRSIGYEAFLVLM
SRHREEVKLHASAEELENIVYQRLDSDVEKVRNQFKINSYEMRDETRINS
AGEEYTVQVKEEIPNWLIGLTLAVSRRANNSFAIDYGKGGTLEGSQLIIK
EYLEARG
>RF_pd46 unknown
MSDQYAATSSRLNSLSSKDSMLRTMSGQQALELASRLIAEEARSIGISEQ
EQMQFKDAVSTDSTTTDNTIMRNNKETATSNNASVGFNAFGLGGASARVS
ASNNTSSSSEEVLSKKQTINNVLEKTKSALQEGRLNSFNSDTQSLARTLS
QNYQEQESIGREISDAISAQDQLSRSRQYVAQNAATIDRNMNEPVLNAII
DSNIPGVSSKEQAARWARTHIHEAASIANSVMPVDNIALDNGRHLSGISS
DVKNIPMRSEQHLKNEYQVQTGKIEASADKINNKQELAYQSVETRLNNNL
SNSVKESYNNLNNTAQLVEQKGKKIEDQYEDTSDSTVKRTLDEIGKNSRL
>RF_pd14 Ankyrin repeat
MLLCKIKGYTERQKLNQKLMRAAATGDIEAVQKLVLRGADIYCRDHQGDT
ALSLAAGSGYLDILDI
>RF_pd04 unknown
MHKSKINPLVESKLSKTVAKIISEKPIEKSGFITSSNNKTTHYKTKTFRL
RQLDAENLIKIIKAVNHYNHRKTYSDSEVIRGLINFISDNLDTNIKKLTS
YINSSS
>RF_pd48 Transposase
MDMAIEYPAYGQLRVSNELKKSGILVSPGEVRSIWLRNDLNNISKRLKAL
EAKMAQDGIVLTEAQLQVLEKRRNEKEAHGEIETQHPGYLGCQDTCYVGN
FKGIGKVYSQVFIDSYTRVVDAKLYADKTAITAADMLNDRVLPWYETQGI
PMLRILTDRGSEYKGNIEHHAFELFLSIEGIEHTTTKAYSPQTNGMCERF
NKTMKQEFFDTAMRKKIYTDLDDLQLDLDIWLEHFNNERLHSGKYCYGKT
PMQTFQDSKKLAIEKNNEILYLEYSSDSQNLTDNQVQNL
>RF_pd43 Putative conjugative transfer protein TraD_F
MLRITTYSSNSEFAKAFENTAVAGMINNSAPETSTGVQATLSKNIAALKH
LAPIRDFSIRQWCNDEENKSWLFLTALPSQRATLSPLLSAWISVALKSLM
SRDIGSTVENLWFIMDELPALGKINSLNTALAESRKYGGCFVAGIQNIFQ
LDKIYGSAAANDLLDLFNSKFIFRVGDQQTAHRSAMMLGEQEIRKTQESL
SYGSNTIRDGVNINTIEQKKMQVLPAEIMSLPNLSCFVKLAGHYPISKLK
MKWQN
>RF_pd54 Transposase
MVVKVRQDKRIINKSVYVALGIDLEGRKDILGLWISENEEAKFWLGNFTE
MKNRGMQDILIACSDNLNGMSEAIGAVFPKTEHQLCIVHQIRNSLRYVSY
KDRKELAGDLKPIYTANTEKEALSALEAFESKWSKQYPQIAKSWYIHWDN
LMILGYPEEIRKIIYTTNAVESVNSQLRKVTKNKRLFPNDNAVFKSLYLA
IDYMTKKWSMPIPNWNAAMAHFLIKFEERI
>RF_pd55 Transposase
MCKFLKGYIKENITKRGITMPQKQNAAMNQAIDLLINNDTDVSTLFKEDG
LLKELTKHLVEKALQSEMNNHLGYSKYNQSDAQNSRNGYNTKNLITKNGA
VEIEVPRDRNSSFEPSLVAKRQRRLDGFDDKVLSLYAKGMSLSDIKLQLQ
ELYGADVSESLIVGLQMI
>RF_pd02 unknown
MSPNPDFITIVKIANYFNCAVDQVVGRRKFLPSINLIVSFNNPDLNDINS
NLCNFLKAKLSQDNISPYLLSKNIGFSKKIIHCFLKANSPYKMLSTNVII
ALADYFNVSVDDMIERYPTTKQ
>RF_pd45 unknown
MLFQILPIFWIIAICAKIPMTKKLIMKFPIISKIWLMLLKFIKDLDIKGM
YSSPNNLTGFSSDMGNHRRDDERSTSPSYFYLPYNIYYESDK
>RF_pd10 unknown
MSYNQEGYEFKITQAFNCLNDAIALTYSSVNHFLDIPKVINKYGVLATVA
LSKTKQLNLTDTKLESIVKNGFIIYEVVETIIKASNAITKDQQLFSKAID
DGLNAVNKLQEAAIHLSGAYEPLAEYVTSFFGSNDQHEPLLFDTYTPNST
SAVNEGYHLIGNNAQLIAVEV
>RF_pd49 Integrase
MNLNQKIIKSKLGLLELAKSLGSISSACKAMGYSRDSYYRFKELYETGGE
EALYEISRRKPMS
>RF_pd57 Transposase
MRFVPIKTVEQQDILSIHRVRERLIKNRTALANEIRGLLHEFGFIIPQGI
NKVMTKLTEILDEGNLSQLGYQTFSELKEEFLDNNKKIKEIEKRLKIITS
NLTQYQRLTTIPGLGLITATALIASIGSATNFDNGRQLSAWLGLVPRQHS
SGGKDKLFGISKRGDVYLRTLLIQGARAVLNAKIRFTSEEQKSKKDFSKF
TQWMFNLSERSGHNKTTVAIANKLARVVFAVLRSGDDYVESKVCS
>RF_pd41 Transposase
MNNKNIPKDYSEVSVADTKASNRHHEQVDLDSHNTSERPRHDALIRKALE
NPLVAKEFFEMHLPKEIKAMFSSHTLKMEKESFVEADLKHSISDILFSAK
FKDNTGYLWVLLEHQSTPDHFMAFRLFKYMTDIASRHLTLNPKSKHLPFV
YPLVFYNGKKKYNAPKNIWDLCQHKELMQDIWTKDHKVVNVHDIPDEELK
KKAWAGILQFFMKHIHERDLLKRWYEVADLLPEFAKLNIGIDYLELILTY
TLIKIEKSDKIELEKLLKSRLNTEQGEKLMTSLAHHWEQQGVEKGMQIGE
AKGMQIGRNEGKHEKTIEVAKNMLSNNYSIPEVSRITGLSIAEINDLLKS
>RF_pd65 unknown
MPNKLGYSYKKNFSSSEKGYWSRNEFILKLKTIDKQDLCILCYAVILKLQ
HYNWDSLLAYIQCCFLNTESTIKIWNVQSKIISVRCVDILNNNEYMQIVH
SGIILLILMLLAICVMPIILLTVCLIMYTIISELKRF
>RF_pd47 Conjugative transfer protein TraG
MVLPLTCLVGGFKFFQFWCNFTIWVSSWPIFYSLVHCLGMLSLSGKVSVF
GGNGMSILSQGSYSEYALNTYATYQMLECLVPPLSWALFKACSHGMSMLA
GQFSPLSVASSVAAGIADNNLSMDNVSIGNRTISQQNLAPSLMMADSSLQ
KALIH
>RF_pd62 unknown
MNINDVPDSHHKEIARDVYSTISEYSNRYALDATDKNKIANSVYEAHCTL
KAWQQRSYAQVATSYTVYQDRQKYLEHKRLADIERESERKTLIEHTQQIK
HEILVAKTVSEIFVALEKDQKFFIEQNGNIKYTTFNYKFVDLVEQALEYK
EQELLPQLKDAAAEAEQHGVFSTQDILAELKGSKDLAETYKHFDSSLERH
HLETQHQQIRKDKVDAKTTDEMLTTIRREHEFFKSLNGKLKYAGQYDSSV
LSAISNAKSIEQDKLITNMHNMVVYAKKHGILNDHEILNQFNSNDSQNVL
KNLSKTCEKHYMDRHNENIKQLLDDEHVIIGSKKYSCPLKYMKHEMQNDI
PSFIDEKQIAATFAKVKAEVKELRLERELEHTMTMRF
>RF_pd08 unknown
MAHIAKYKIDVIILGIDLEEVDGIKICTRLKQNPSTTYIPVVMIAEKEDT
DIRIQAFNAGADELITYPINIIVFTS
>RF_pd60 hypothetical protein
MSVGRKNWLFAGSDSGGHTASIIYSIIKTAKLNHINLWKYLQKVLAIIQD
YRANKVEDLLPWNILLD
>RF_pd58 Transposase
MVGIDIAKRIFQIHGVDKNGNTVLKKKLMREQILTFMANLPKCLVGTEAC
GGASWAREITKLDHTVKLMAPQFVKPYVKTNKNDQADAEAICEAVADQI
>RF_pd67 Transposase
MDYSYNFISLEASNVLRDWLLEFSFIYEITKNRYCANYGRPSIDPVLFFR
MQIISYLIW
>RF_pd66 Site-specific recombinases
MAKVGYARVSSLGQLLSIQLDKLKDCDKIFQEKKSGLDGTRSALKNALDY
VREGDIFIVTKLDRLARSTAHLCKIAEILNQKSVALKVLDQNIDTKDATG
RLIFNVLGAIGQFETEIRAERQIDGILKAKERGIQFGKKQYLTKQQLNDL
KEKRKQGIKIKNLMQEFNLSKASIYRYLAQEV
>RF_pd12 unknown
MFKIKNITKSIKHIKKILTPSSHKTTCSSIVASTFDMETSNKITSDFGFS
KKYVVNNSKEIDWVGIRKAIYNRFSDEIDATNIQSLEQVTPLVASKQQGF
SATNVNINWAEIRALIYNRFADEIHAWSKKQHGDIIKYSPVRDVNEELEI
IKEQGYSFAKQKAALKRSITDKWDEIERIKYLSQDTSWNTKSQQKLLSHD
NSIIGRMKFLSIKGYLSNYAGDDELSQSIDSVIKIKDTLITEFMNRVYDK
HMHATAARQNVAEAITFDSLIDEQEVMVLGE
>RF_pd06 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
MPLLNERDVETRIEEQLKNLEWIDNPSLPNRNVYKQNPKTEKQRKALGSK
RPDYTLYRDNSDDPLIVIEAKRPNTNLSQALEQGNNYAKAINAPIVIATD
GIFAKTFHTKMQKPLFLDKEEISKIIQQSLAIEYIDKNEYFSIDEKVIKS
RDELLTIFKEINNQFKDAGVSRGLPRIELFCNLLFLKVITELVGTNSLIH
SLPDWCTWDKIKAKKGDDLWTFINTQAFDYLSF
>RF_pd52 hspP1, Small heat shock protein
MNTYLSEITNLIYYINLKEVCMLYNNIKSYLLSGITVILLTGHPVIAADN
VSKPDNKSQTAYLQHPPDLRPFSIFDYYLDNMFEHKLSAYSSSAIRTKFI
TQDKQYILVLEVPGYDKSQIKVKVNSNKLFITGNVEQNNKSEASDDYTKR
NFNYVVSLYEDVDQNNISSNLKNGILTITLPRIEVKEKDAKEIPIQ
>RF_pd51 hspP2, Small heat shock protein
MFNKLMEVLMSFNLPRIRNKSELQHHTNKQSYVDDVFNNFFNEIASFSYP
THYNNKILSPRTDITENESEYHLEVELPGVTQDNIDLKIDSNILTIDGKK
EQSTEKKDHNYHMKERYYGSFSRSISLPSNVDEEHVTANFKDGILSIKIP
KKEQSKAKKIKIS
>RF_pd03 parA1, Chromosome partitioning ParA family protein
MVRVYYNCITWRLCMSSKIIAIINQKGGVGKSTIAVNLSFGLYKKTSRVL
LIDLDPQAHSSCIYCPETILYDKTIATAFINKKIDINNLILEAIVHNEKL
NNLKIIPSNIKLATVIEQISSTVYRERILQNHLNTIKKDYDYIILDCPPT
LGILAVNAIYCANSIIIPTNYGRYSLDGMADLLTAIQEIKEDHDYKFFIL
KNLYEQKNSQTNRYINEQLKALDEHLLTTIIRKNEAINQAQINNLPIQIF
NSSSKGAQDFSLLVDEVIHYA
>RF_pd11 pat2, Patatin-like phospholipase
MTTAIHTQQTFEHIEQGTVDNIKGDNTTHDSTSESIKSNRILSLSGGGVK
GIAELVVLAEIEERTGKSISELFPIISGTSVGGLIAGLLTIPKEQGSNIA
KYSAKDALKIFTDAAPKIFEHHWYDGIKQIFTHKHSQGPLKEILEQHLAG
LRLDDTTSRLIIPVTDLASKDKEVKIFDSHDSYSPHIRVQDVLLATTAAP
TYFKPVTNQEHIKGYENQEDALYAYADGGLGANRPAYEALKILKNGHSRE
ENAKILDDTMVLSLNFDNDHKASSSIPKIGFDGVIGWLVKGKLVSRLMQS
SEDSSTAEVRVGLPGEDEFVEVKLPITKETSSLDNSSLKNIEALVAVGRK
YIEEHTEQLQKLCDNLVKYVEVETKAMTHEKAAKDAGGAIELGSGLDLEN
SSDDDAMINKEAIANSNEDANKSDGDDVVSNSIITNENREQILDGIKQYL
TSFANDNPDLQENIVQYLTSVNDYSNQELEKLILDFAEGQKVVQEMELHE
AESVLAPYMSCGMEANQEAMELEGIDDEVQNHEVLA
>RF_pd13 tmk, Thymidylate kinase
MNSTNRVKRGRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGT
EIAEEMRSILVHRDLLPMSELLQVMAARYDHIVKKILPAIEAGYTVICDR
FIDSTVVYQGLEIDSGMELVYSLHKKLMPSIMPDITFFIDIEPVLAMERV
KVRNGSNYSSSNLRNNRFDIKDLDYYKKIHNGFRTLADKYLKRIKTIKVT
ALSTPTPTHKIITRYYQGLDLGYAKQI