Gene list
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Genomic element: IncN plasmid R46
Number of genes found: 146
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
IncN plasmid R46 | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | IncN plasmid R46 | repeat_region | 31669 | 30 | + | 0.2 | |||
NA | IncN plasmid R46 | -35_signal | 25851 | 6 | - | 0.333333 | |||
NA | IncN plasmid R46 | misc_feature | 20199 | 10 | - | 0.5 | |||
NA | IncN plasmid R46 | misc_recomb | 36919 | 6 | + | 0.666667 | |||
NA | IncN plasmid R46 | -10_signal | 34958 | 6 | + | 0.166667 | |||
NA | IncN plasmid R46 | repeat_region | 25338 | 67 | - | 0.507463 | |||
NA | IncN plasmid R46 | misc_recomb | 37731 | 64 | + | 0.640625 | |||
NA | IncN plasmid R46 | misc_feature | 35187 | 876 | + | 0.5 | |||
NA | IncN plasmid R46 | misc_feature | 36919 | 876 | + | 0.5 | |||
NA | IncN plasmid R46 | -35_signal | 34935 | 6 | + | 0.5 | |||
NA | Fip | SubName: Full=Fip; | IncN plasmid R46 | CDS | 14184 | 627 | - | 0.539075 | |
NA | hypothetical protein | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 1032 | 642 | - | 0.490654 | |
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 2353 | 378 | - | 0.349206 | |
NA | IncN plasmid R46 | misc_recomb | 36063 | 6 | + | 0.166667 | |||
NA | recombinase | SubName: Full=Recombinase; | IncN plasmid R46 | CDS | 50134 | 657 | - | 0.494673 | |
NA | IncN plasmid R46 | repeat_region | 32510 | 240 | + | 0.691667 | |||
NA | IncN plasmid R46 | repeat_region | 32767 | 324 | + | 0.719136 | |||
NA | IncN plasmid R46 | misc_feature | 37795 | 320 | + | 0.546875 | |||
NA | IncN plasmid R46 | repeat_region | 23759 | 124 | + | 0.725806 | |||
NA | IncN plasmid R46 | repeat_region | 31551 | 108 | - | 0.509259 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 37828 | 291 | + | 0.553265 | |
NA | IncN plasmid R46 | -10_signal | 25828 | 6 | - | 0.166667 | |||
NA | IncN plasmid R46 | RBS | 24558 | 4 | - | 0.75 | |||
NA | IncN plasmid R46 | misc_feature | 1 | 36260 | + | 0.505654 | |||
NA | IncN plasmid R46 | misc_recomb | 38061 | 54 | + | 0.611111 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 41659 | 363 | - | 0.575758 | |
NA | IncN plasmid R46 | repeat_region | 26264 | 124 | - | 0.741935 | |||
NA | IncN plasmid R46 | misc_recomb | 35187 | 6 | + | 0.666667 | |||
NA | IncN plasmid R46 | repeat_region | 31238 | 28 | - | 0.285714 | |||
NA | hypothetical protein | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 830 | 198 | - | 0.313131 | |
NA | IncN plasmid R46 | repeat_region | 33835 | 6418 | + | 0.561078 | |||
NA | IncN plasmid R46 | repeat_region | 23216 | 429 | - | 0.638695 | |||
NA | IncN plasmid R46 | misc_feature | 38115 | 2138 | + | 0.59869 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 1729 | 312 | - | 0.50641 | |
NA | IncN plasmid R46 | oriT | 20316 | 1738 | - | 0.420598 | |||
NA | IncN plasmid R46 | repeat_region | 25767 | 436 | - | 0.646789 | |||
NA | IncN plasmid R46 | misc_recomb | 36865 | 54 | + | 0.62963 | |||
NA | IncN plasmid R46 | misc_recomb | 35131 | 65 | + | 0.492308 | |||
NA | IncN plasmid R46 | protein_bind | 27866 | 33 | - | 0.30303 | |||
NA | IncN plasmid R46 | -35_signal | 24641 | 6 | - | 0.333333 | |||
NA | IncN plasmid R46 | misc_recomb | 35999 | 64 | + | 0.640625 | |||
NA | IncN plasmid R46 | misc_feature | 33835 | 1352 | + | 0.602071 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 39531 | 489 | + | 0.660532 | |
NA | IncN plasmid R46 | -10_signal | 24618 | 6 | - | 0.166667 | |||
NA | IncN plasmid R46 | misc_feature | 36063 | 856 | + | 0.53271 | |||
NA | IncN plasmid R46 | misc_recomb | 37795 | 6 | + | 0.166667 | |||
NA | IncN plasmid R46 | misc_feature | 38115 | 390 | + | 0.441026 | |||
NA | IncN plasmid R46 | repeat_region | 27784 | 264 | - | 0.560606 | |||
NA | IncN plasmid R46 | repeat_region | 33835 | 25 | + | 0.52 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 43854 | 324 | + | 0.611111 | |
NA | IncN plasmid R46 | -10_signal | 27846 | 6 | - | 0.166667 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 44385 | 468 | + | 0.527778 | |
NA | IncN plasmid R46 | -35_signal | 27869 | 6 | - | 0.5 | |||
NA | IncN plasmid R46 | -35_signal | 23300 | 6 | - | 0.333333 | |||
NA | IncN plasmid R46 | repeat_region | 24557 | 338 | + | 0.627219 | |||
NA | IncN plasmid R46 | -10_signal | 23277 | 6 | - | 0.166667 | |||
IS26 (IS46) | IncN plasmid R46 | repeat_region | 1 | 820 | + | 0.52439 | |||
IS26(IS46) | IncN plasmid R46 | repeat_region | 40612 | 821 | + | 0.52497 | |||
IS6100 | IncN plasmid R46 | repeat_region | 40314 | 298 | + | 0.583893 | |||
aadA1 | aminoglycoside (3' ') adenylyltransferase | RecName: Full=Streptomycin 3-adenylyltransferase; EC=2.7.7.47; | IncN plasmid R46 | CDS | 36072 | 792 | + | 0.530303 | |
ardA | ArdA protein | SubName: Full=ArdA protein; | IncN plasmid R46 | CDS | 24042 | 510 | - | 0.454902 | |
ardB | IncN plasmid R46 | RBS | 27788 | 4 | - | 0.75 | |||
ardB | ArdB protein | SubName: Full=ArdB protein; | IncN plasmid R46 | CDS | 27355 | 426 | - | 0.478873 | |
ardK | ArdK protein | SubName: Full=ArdK protein; | IncN plasmid R46 | CDS | 30843 | 342 | - | 0.435673 | |
ardK | IncN plasmid R46 | -10_signal | 31216 | 6 | - | 0.333333 | |||
ardK | IncN plasmid R46 | RBS | 31193 | 5 | - | 0.8 | |||
ardK | IncN plasmid R46 | -35_signal | 31239 | 6 | - | 0.5 | |||
ardR | ArdR protein | SubName: Full=ArdR protein; | IncN plasmid R46 | CDS | 26893 | 405 | - | 0.48642 | |
ardR | IncN plasmid R46 | RBS | 27305 | 3 | - | 0.666667 | |||
arsA | arsenite acitvated ATPase | SubName: Full=Arsenite acitvated ATPase; | IncN plasmid R46 | CDS | 46163 | 1752 | + | 0.513128 | |
arsB | arsenite transport protein | RecName: Full=Arsenical pump membrane protein; | IncN plasmid R46 | CDS | 47964 | 1290 | + | 0.523256 | |
arsC | arsenate reductase | SubName: Full=Arsenate reductase; | IncN plasmid R46 | CDS | 49266 | 426 | + | 0.49061 | |
arsD | repressor protein | SubName: Full=Repressor protein; | IncN plasmid R46 | CDS | 45783 | 363 | + | 0.506887 | |
arsR | repressor protein | SubName: Full=Repressor protein; | IncN plasmid R46 | CDS | 45382 | 354 | + | 0.539548 | |
ccgAI | IncN plasmid R46 | RBS | 23217 | 4 | - | 0.75 | |||
ccgAI | CcgAI protein | SubName: Full=CcgAI protein; | IncN plasmid R46 | CDS | 23032 | 180 | - | 0.5 | |
ccgAII | CcgAII protein | SubName: Full=CcgAII protein; | IncN plasmid R46 | CDS | 22657 | 321 | - | 0.538941 | |
ccgAII | IncN plasmid R46 | RBS | 22987 | 4 | - | 0.75 | |||
ccgC | CcgC protein | SubName: Full=CcgC protein; | IncN plasmid R46 | CDS | 25049 | 285 | - | 0.533333 | |
ccgC | IncN plasmid R46 | RBS | 25339 | 4 | - | 0.75 | |||
ccgD | IncN plasmid R46 | RBS | 25768 | 4 | - | 0.75 | |||
ccgD | CcgD protein | SubName: Full=CcgD protein; | IncN plasmid R46 | CDS | 25466 | 297 | - | 0.454545 | |
ccgEIII | IncN plasmid R46 | RBS | 26891 | 4 | - | 0.75 | |||
ccgEIII | CcgEIII | SubName: Full=CcgEIII; | IncN plasmid R46 | CDS | 26644 | 240 | - | 0.425 | |
eex | entry exclusion protein | SubName: Full=Entry exclusion protein; | IncN plasmid R46 | CDS | 8192 | 228 | + | 0.473684 | |
intI1 | integrase | SubName: Full=IntI; SubName: Full=IntI1; SubName: Full=IntI1 integrase; SubName: Full=Integrase; | IncN plasmid R46 | CDS | 34037 | 1014 | - | 0.61144 | |
intI1 | IncN plasmid R46 | -10_signal | 35077 | 6 | - | 0.333333 | |||
intI1 | IncN plasmid R46 | -35_signal | 35093 | 6 | - | 0.333333 | |||
kikA | KikA | SubName: Full=KikA; | IncN plasmid R46 | CDS | 2076 | 315 | - | 0.457143 | |
korA | KorA | SubName: Full=KorA; | IncN plasmid R46 | CDS | 3903 | 282 | + | 0.421986 | |
korB | KorB | SubName: Full=KorB; | IncN plasmid R46 | CDS | 2746 | 306 | - | 0.51634 | |
mpr | Mpr protein | SubName: Full=Mpr protein; | IncN plasmid R46 | CDS | 30037 | 792 | + | 0.522727 | |
mpr | IncN plasmid R46 | RBS | 30027 | 4 | + | 0.75 | |||
mucA | IncN plasmid R46 | RBS | 28182 | 6 | + | 0.5 | |||
mucA | IncN plasmid R46 | protein_bind | 28160 | 16 | + | 0.25 | |||
mucA | IncN plasmid R46 | -35_signal | 28134 | 6 | + | 0.5 | |||
mucA | IncN plasmid R46 | -10_signal | 28158 | 6 | + | 0.333333 | |||
mucA | MucA protein | SubName: Full=MucA protein; | IncN plasmid R46 | CDS | 28193 | 441 | + | 0.519274 | |
mucB | MucB protein | SubName: Full=MucB protein; | IncN plasmid R46 | CDS | 28621 | 1266 | + | 0.534755 | |
nuc | endonuclease | SubName: Full=Endonuclease; | IncN plasmid R46 | CDS | 13481 | 534 | + | 0.516854 | |
orfD | OrfD | SubName: Full=OrfD; SubName: Full=Uncharacterized protein; | IncN plasmid R46 | CDS | 22202 | 345 | + | 0.562319 | |
orfD | IncN plasmid R46 | RBS | 22191 | 5 | + | 0.8 | |||
oxa2 | OXA-2 beta-lactamase precursor | SubName: Full=Beta-lactamase OXA-2; SubName: Full=OXA-2 beta-lactamase; | IncN plasmid R46 | CDS | 35208 | 828 | + | 0.5 | |
oxa2 | OXA-2 beta-lactamase precursor | SubName: Full=Beta-lactamase OXA-2; SubName: Full=OXA-2 beta-lactamase; | IncN plasmid R46 | CDS | 36940 | 828 | + | 0.5 | |
qacEdelta1 | IncN plasmid R46 | -10_signal | 38159 | 6 | + | 0.333333 | |||
qacEdelta1 | QacEdelta1 | SubName: Full=Ethidium bromide resistance protein; SubName: Full=Multidrug efflux protein; SubName: Full=QacEdelta 1 protein; SubName: Full=QacEdelta1; SubName: Full=QacEdelta1 multidrug exporter; SubName: Full=Quaternary ammonium compound and disinfectant protein; SubName: Full=Quaternary ammonium compound resistance protein; SubName: Full=Quaternary ammonium compound-resistance protein; | IncN plasmid R46 | CDS | 38223 | 348 | + | 0.5 | |
qacEdelta1 | IncN plasmid R46 | -35_signal | 38136 | 6 | + | 0.5 | |||
repA | IncN plasmid R46 | RBS | 31732 | 3 | + | 0.666667 | |||
repA | RepA protein | SubName: Full=RepA protein; | IncN plasmid R46 | CDS | 31743 | 720 | + | 0.440278 | |
repA | IncN plasmid R46 | -35_signal | 31690 | 6 | + | 0.333333 | |||
repA | IncN plasmid R46 | -10_signal | 31713 | 6 | + | 0.166667 | |||
resP | resolvase | SubName: Full=Resolvase; | IncN plasmid R46 | CDS | 33148 | 597 | - | 0.467337 | |
resP | IncN plasmid R46 | RBS | 33753 | 3 | - | 0.666667 | |||
stbA | IncN plasmid R46 | RBS | 20497 | 4 | + | 0.75 | |||
stbA | StbA | SubName: Full=StbA; | IncN plasmid R46 | CDS | 20506 | 420 | + | 0.428571 | |
stbABC/orfD operon | IncN plasmid R46 | -10_signal | 20402 | 6 | + | 0.166667 | |||
stbABC/orfD operon | IncN plasmid R46 | -35_signal | 20379 | 6 | + | 0.333333 | |||
stbB | StdB | SubName: Full=StbB; SubName: Full=StdB; | IncN plasmid R46 | CDS | 20934 | 717 | + | 0.415621 | |
stbB | IncN plasmid R46 | RBS | 20924 | 4 | + | 0.75 | |||
stbC | IncN plasmid R46 | RBS | 21642 | 4 | + | 0.75 | |||
stbC | StbC | SubName: Full=StbC; | IncN plasmid R46 | CDS | 21652 | 369 | + | 0.476965 | |
sul1 | Sul1 dihydropteroate synthase | SubName: Full=Dihydropteroate synthase; SubName: Full=Dihydropteroate synthase 1; SubName: Full=Dihydropteroate synthase type 1; SubName: Full=Sul; SubName: Full=Sul1 dihydropteroate synthase; SubName: Full=Sul1 protein; SubName: Full=Sul1, dihydropteroate synthase; SubName: Full=Sulfonamide resistance protein; | IncN plasmid R46 | CDS | 38564 | 840 | + | 0.616667 | |
tetA | tetracycline resistance protein | SubName: Full=Tetracycline resistance protein; SubName: Full=Tetracycline resistance protein class C; | IncN plasmid R46 | CDS | 42760 | 1176 | + | 0.613095 | |
tetR | tetracycline repressor protein | SubName: Full=Tetracycline repressor protein; SubName: Full=Tetracycline resistance regulatory protein; | IncN plasmid R46 | CDS | 42008 | 660 | - | 0.587879 | |
tnpA | IncN plasmid R46 | RBS | 54 | 4 | + | 0.75 | |||
tnpA | IncN plasmid R46 | -35_signal | 41419 | 6 | - | 0.333333 | |||
tnpA | transposase TnpA | SubName: Full=IS26 transposase; SubName: Full=TnpA26; SubName: Full=Transposase; SubName: Full=Transposase TnpA; SubName: Full=Transposase of IS26; | IncN plasmid R46 | CDS | 64 | 705 | + | 0.531915 | |
tnpA | IncN plasmid R46 | -10_signal | 28 | 6 | + | 0.166667 | |||
tnpA | IncN plasmid R46 | -35_signal | 8 | 6 | + | 0.333333 | |||
tnpA | IncN plasmid R46 | RBS | 41375 | 4 | - | 0.75 | |||
tnpA | transposase | SubName: Full=IS26 transposase; SubName: Full=TnpA26; SubName: Full=Transposase; SubName: Full=Transposase TnpA; SubName: Full=Transposase of IS26; | IncN plasmid R46 | CDS | 40664 | 705 | - | 0.531915 | |
tnpA | IncN plasmid R46 | -10_signal | 41399 | 6 | - | 0.166667 | |||
traA | TraA | SubName: Full=TraA; | IncN plasmid R46 | CDS | 4537 | 312 | + | 0.432692 | |
traB | TraB | SubName: Full=TraB; | IncN plasmid R46 | CDS | 4853 | 2601 | + | 0.497117 | |
traC | TraC | SubName: Full=TraC; | IncN plasmid R46 | CDS | 7471 | 714 | + | 0.512605 | |
traD | TraD | SubName: Full=TraD; | IncN plasmid R46 | CDS | 8435 | 1041 | + | 0.529299 | |
traE | TraE | SubName: Full=TraE; | IncN plasmid R46 | CDS | 9694 | 699 | + | 0.505007 | |
traF | TraF | SubName: Full=TraF; | IncN plasmid R46 | CDS | 11287 | 1161 | + | 0.540913 | |
traG | TraG | SubName: Full=TraG; | IncN plasmid R46 | CDS | 12486 | 996 | + | 0.5 | |
traI | TraI | SubName: Full=TraI; | IncN plasmid R46 | CDS | 14810 | 3237 | - | 0.526413 | |
traJ | TraJ | SubName: Full=TraJ; | IncN plasmid R46 | CDS | 18046 | 1530 | - | 0.439869 | |
traK | TraK | SubName: Full=TraK; | IncN plasmid R46 | CDS | 19577 | 417 | - | 0.496403 | |
traL | TraL | SubName: Full=TraL; | IncN plasmid R46 | CDS | 3160 | 735 | + | 0.507483 | |
traM | TraM | SubName: Full=TraM; | IncN plasmid R46 | CDS | 4194 | 294 | + | 0.486395 | |
traN | TraN | SubName: Full=TraN; | IncN plasmid R46 | CDS | 9558 | 147 | + | 0.510204 | |
traO | TraO | SubName: Full=TraO; | IncN plasmid R46 | CDS | 10403 | 885 | + | 0.501695 |