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2024-05-05 13:11:14

Gene list

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Genomic element: pTT27

Number of genes found: 251

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermus thermophilus HB8, HB8
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TTHB001 hypothetical proteinpTT27 CDS3 300 - 0.71
TTHB002 hypothetical proteinpTT27 CDS452 363 - 0.666667
TTHB003 hypothetical proteinpTT27 CDS1033 276 + 0.608696
TTHB004 probable transposasepTT27 CDS1305 519 - 0.67052
TTHB005 probable transposasepTT27 CDS1877 462 - 0.690476
TTHB006 conserved hypothetical proteinpTT27 CDS2363 309 - 0.644013
TTHB007 conserved hypothetical proteinpTT27 CDS2672 273 - 0.714286
TTHB008 conserved hypothetical proteinpTT27 CDS3328 231 + 0.679654
TTHB009 conserved hypothetical proteinpTT27 CDS3555 405 + 0.711111
TTHB010 transposase-related proteinpTT27 CDS4080 225 - 0.635556
TTHB011 probable transposasepTT27 CDS4341 285 - 0.677193
TTHB012 phosphoglycerate mutase family proteinpTT27 CDS5044 654 - 0.668196
TTHB013 hypothetical proteinpTT27 CDS5694 351 - 0.689459
TTHB014 probable phosphotransferasepTT27 CDS6037 978 - 0.709611
TTHB015 putative acyl-CoA dehydrogenasepTT27 CDS7011 1161 - 0.683032
TTHB016 oxidoreductase, short-chain dehydrogenase/reductase familypTT27 CDS8184 762 - 0.715223
TTHB017 medium-chain acyl-CoA ligase-related proteinpTT27 CDS8945 945 - 0.687831
TTHB018 conserved hypothetical proteinpTT27 CDS9925 354 - 0.728814
TTHB019 MaoC-related acyl dehydratasepTT27 CDS10275 456 - 0.673246
TTHB020 3-oxoacyl-[acyl carrier protein] reductasepTT27 CDS10714 792 - 0.724747
TTHB021 conserved hypothetical proteinpTT27 CDS11505 531 - 0.6629
TTHB022 putative acyl-CoA dehydrogenasepTT27 CDS12048 1137 - 0.689534
TTHB023 transcriptional regulator, TetR familypTT27 CDS13171 576 - 0.654514
TTHB024 hypothetical proteinpTT27 CDS15489 831 + 0.658243
TTHB025 conserved hypothetical proteinpTT27 CDS14194 1311 - 0.685736
TTHB026 hypothetical proteinpTT27 CDS16328 795 + 0.691824
TTHB027 hypothetical proteinpTT27 CDS17144 198 - 0.631313
TTHB028 hypothetical proteinpTT27 CDS17753 201 - 0.676617
TTHB029 conserved hypothetical proteinpTT27 CDS18731 795 + 0.719497
TTHB030 probable sugar transporterpTT27 CDS19539 981 + 0.717635
TTHB031 probable sugar transporterpTT27 CDS20405 387 + 0.723514
TTHB032 putative beta-galactosidasepTT27 CDS20794 1725 + 0.728696
TTHB033 alpha-glucosidasepTT27 CDS22581 2331 + 0.7426
TTHB034 putative beta-mannosidasepTT27 CDS24908 1737 + 0.71445
TTHB035 hypothetical proteinpTT27 CDS26746 210 + 0.714286
TTHB036 probable sugar transporterpTT27 CDS26955 1263 + 0.713381
TTHB037 hypothetical proteinpTT27 CDS28563 2628 - 0.74239
TTHB038 hypothetical proteinpTT27 CDS31325 219 + 0.634703
TTHB039 hypothetical proteinpTT27 CDS31851 1275 + 0.718431
TTHB040 conserved hypothetical proteinpTT27 CDS33125 450 + 0.668889
TTHB041 hypothetical proteinpTT27 CDS33583 696 + 0.721264
TTHB042 hypothetical proteinpTT27 CDS34257 1605 + 0.702804
TTHB043 cobyrinic acid a,c-diamide synthasepTT27 CDS36195 1323 - 0.724868
TTHB044 cob(I)alamin adenosyltransferasepTT27 CDS37517 564 - 0.679078
TTHB045 repeat motif-containing proteinpTT27 CDS38112 834 - 0.660671
TTHB046 cobalamin (5'-phosphate) synthasepTT27 CDS38950 723 - 0.731674
TTHB047 hypothetical proteinpTT27 CDS39673 1809 - 0.719182
TTHB048 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasepTT27 CDS41504 1008 - 0.75
TTHB049 alpha-ribazole-5'-phosphate phosphatasepTT27 CDS42538 534 + 0.700375
TTHB050 probable high-affinity nickel permeasepTT27 CDS43336 663 + 0.714932
TTHB051 cobalamin biosynthetic proteinpTT27 CDS43995 1101 + 0.697548
TTHB052 cobalamin biosynthesis precorrin-8X isomerasepTT27 CDS45130 657 + 0.701674
TTHB053 precorrin-6Y C5,15-methyltransferase [decarboxylating]pTT27 CDS45787 1212 + 0.693894
TTHB054 precorrin-2 methylasepTT27 CDS46995 672 + 0.702381
TTHB055 precorrin-4 C11-methyltransferasepTT27 CDS47663 744 + 0.697581
TTHB056 precorrin-3 C17-methyltransferasepTT27 CDS48411 888 + 0.681306
TTHB057 cobalamin biosynthesis protein CbiGpTT27 CDS49291 1080 + 0.700926
TTHB058 cobalamin biosynthesis protein CbiXpTT27 CDS50367 1104 + 0.735507
TTHB059 hypothetical proteinpTT27 CDS51471 363 + 0.694215
TTHB060 S-adenosyl-L-methionine uroporphyrinogen methyltransferasepTT27 CDS51830 708 + 0.727401
TTHB061 cobalamin biosynthesis nitroreductase BluBpTT27 CDS52503 648 + 0.675926
TTHB062 cobalamin biosynthesis protein CbiBpTT27 CDS53147 849 + 0.716137
TTHB063 conserved hypothetical proteinpTT27 CDS54005 432 + 0.675926
TTHB064 conserved hypothetical proteinpTT27 CDS54363 330 + 0.693939
TTHB065 cobalamin biosynthesis aminotransferasepTT27 CDS54729 1008 + 0.706349
TTHB066 cobyric acid synthase/cobinamide kinasepTT27 CDS55950 1890 + 0.725397
TTHB067 alkaline phosphatasepTT27 CDS57836 1506 - 0.694555
TTHB068 conserved hypothetical proteinpTT27 CDS59516 2058 - 0.69242
TTHB069 conserved hypothetical proteinpTT27 CDS61751 402 + 0.681592
TTHB070 survival protein SurEpTT27 CDS62228 735 - 0.721088
TTHB071 conserved hypothetical proteinpTT27 CDS62972 765 - 0.722876
TTHB072 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasepTT27 CDS64037 624 + 0.689103
TTHB073 transcriptional regulatorpTT27 CDS64638 777 - 0.698842
TTHB074 putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding proteinpTT27 CDS65492 960 + 0.670833
TTHB075 putative C4-dicarboxylate transporter, small permease proteinpTT27 CDS66493 462 + 0.664502
TTHB076 putative C4-dicarboxylate transporter, large permease proteinpTT27 CDS66957 1284 + 0.676012
TTHB077 oxidoreductase, short-chain dehydrogenase/reductase familypTT27 CDS68237 705 + 0.693617
TTHB078 malate/L-lactate dehydrogenase family proteinpTT27 CDS68938 1035 + 0.730435
TTHB079 2-keto-3-deoxy-gluconate kinasepTT27 CDS69965 930 + 0.710753
TTHB080 2-deoxy-D-gluconate 3-dehydrogenasepTT27 CDS70904 720 + 0.722222
TTHB081 transcriptional regulator, lacI familypTT27 CDS71841 993 + 0.717019
TTHB082 sugar ABC transporter, periplasmic sugar-binding proteinpTT27 CDS72909 1305 + 0.694253
TTHB083 sugar ABC transporter, permease proteinpTT27 CDS74252 528 + 0.63447
TTHB084 transposasepTT27 CDS74763 1221 - 0.643735
TTHB085 sugar ABC transporter, permease proteinpTT27 CDS76019 420 + 0.67381
TTHB086 sugar ABC transporter, permease proteinpTT27 CDS76442 858 + 0.652681
TTHB087 beta-glucosidasepTT27 CDS77321 1296 + 0.708333
TTHB088 Zn-dependent hydrolasepTT27 CDS78640 825 - 0.690909
TTHB089 conserved hypothetical proteinpTT27 CDS79721 666 + 0.719219
TTHB090 conserved hypothetical proteinpTT27 CDS80373 753 + 0.7583
TTHB091 conserved hypothetical proteinpTT27 CDS81122 1281 + 0.736924
TTHB092 probable phytoene dehydrogenasepTT27 CDS82317 1404 - 0.732906
TTHB093 putative oxidoreductasepTT27 CDS83768 1494 + 0.732932
TTHB094 putative short-chain oxidoreductasepTT27 CDS85323 624 + 0.735577
TTHB095 conserved hypothetical proteinpTT27 CDS85948 531 + 0.704331
TTHB096 conserved hypothetical proteinpTT27 CDS86475 516 + 0.69186
TTHB097 hypothetical proteinpTT27 CDS87001 210 - 0.695238
TTHB098 NADH-ubiquinone oxidoreductase 39 kDa subunit related proteinpTT27 CDS87383 864 - 0.700231
TTHB099 transcriptional regulator, Crp familypTT27 CDS88247 588 - 0.705782
TTHB100 transcriptional regulator, MerR familypTT27 CDS88831 858 - 0.731935
TTHB101 phytoene synthasepTT27 CDS89780 870 + 0.72069
TTHB102 DNA photolyasepTT27 CDS90649 1263 + 0.729216
TTHB103 cytochrome P450 (Cyp175a1)pTT27 CDS92097 1170 + 0.716239
TTHB104 phytoene synthase-related proteinpTT27 CDS93263 699 + 0.708154
TTHB105 putative acyltransferasepTT27 CDS93966 678 + 0.713864
TTHB106 probable glycosyltransferasepTT27 CDS94640 1023 + 0.713587
TTHB107 conserved hypothetical proteinpTT27 CDS95716 261 + 0.651341
TTHB108 plasmid stability proteinpTT27 CDS95997 393 + 0.689567
TTHB109 phytoene dehydrogenasepTT27 CDS96487 1569 + 0.6826
TTHB110 isopentenyl-diphosphate delta-isomerasepTT27 CDS98052 999 + 0.723724
TTHB111 conserved hypothetical proteinpTT27 CDS99060 393 + 0.697201
TTHB112 conserved hypothetical proteinpTT27 CDS99483 948 - 0.71308
TTHB113 conserved hypothetical proteinpTT27 CDS100427 789 - 0.69962
TTHB114 galactose-1-phosphate uridylyltransferasepTT27 CDS101295 1050 - 0.69619
TTHB115 alpha-galactosidasepTT27 CDS102328 1431 - 0.707897
TTHB116 acyl-CoA dehydrogenase, short-chain specific (probable AidB protein)pTT27 CDS104030 1626 - 0.722017
TTHB117 putative type IV pilinpTT27 CDS105746 420 + 0.652381
TTHB118 probable secretion system proteinpTT27 CDS106162 480 + 0.704167
TTHB119 prepilin-like proteinpTT27 CDS106653 930 + 0.65914
TTHB120 conserved hypothetical proteinpTT27 CDS107595 1872 + 0.675214
TTHB121 resolvase-related proteinpTT27 CDS109973 303 - 0.666667
TTHB122 hypothetical proteinpTT27 CDS110549 213 - 0.647887
TTHB123 hypothetical proteinpTT27 CDS111125 276 - 0.681159
TTHB124 chromosome partitioning protein, ParB familypTT27 CDS111457 888 - 0.677928
TTHB125 chromosome partitioning ATPase, ParA familypTT27 CDS112341 969 - 0.713106
TTHB126 conserved hypothetical proteinpTT27 CDS113820 1392 - 0.685345
TTHB127 arsenite oxidase, large subunitpTT27 CDS115281 2586 - 0.662413
TTHB128 arsenite oxidase, small subunitpTT27 CDS117878 483 - 0.687371
TTHB129 transposasepTT27 CDS118438 1221 - 0.643735
TTHB130 putative transcriptional regulatorpTT27 CDS119724 339 + 0.740413
TTHB131 hypothetical proteinpTT27 CDS120481 552 + 0.719203
TTHB132 peptide methionine sulfoxide reductasepTT27 CDS121042 531 + 0.687382
TTHB133 conserved hypothetical proteinpTT27 CDS121736 189 - 0.719577
TTHB134 hypothetical proteinpTT27 CDS121929 396 - 0.704545
TTHB135 conserved hypothetical proteinpTT27 CDS122441 447 - 0.697987
TTHB136 probable transcriptional regulator, CopG familypTT27 CDS122884 291 - 0.742268
TTHB137 hypothetical proteinpTT27 CDS123434 759 + 0.69697
TTHB138 conserved hypothetical proteinpTT27 CDS124189 312 + 0.698718
TTHB139 permease of the major facilitator superfamilypTT27 CDS124777 1245 + 0.722892
TTHB140 conserved hypothetical proteinpTT27 CDS125927 1470 - 0.747619
TTHB141 putative glycerophosphoryl diester phosphodiesterasepTT27 CDS127398 675 - 0.72
TTHB142 glycerol kinasepTT27 CDS128207 1488 + 0.715054
TTHB143 putative glycerol-3-phohsphate dehydrogenasepTT27 CDS129694 1533 + 0.710372
TTHB144 conserved hypothetical proteinpTT27 CDS131246 1206 + 0.708126
TTHB145 conserved hypothetical proteinpTT27 CDS132455 948 + 0.716245
TTHB146 transposasepTT27 CDS133966 954 - 0.684486
TTHB147 conserved hypothetical proteinpTT27 CDS136457 2418 + 0.721671
TTHB148 hypothetical proteinpTT27 CDS138875 405 + 0.634568
TTHB149 conserved hypothetical proteinpTT27 CDS139291 726 + 0.65978
TTHB150 conserved hypothetical proteinpTT27 CDS140026 876 + 0.706621
TTHB151 conserved hypothetical proteinpTT27 CDS140859 1194 + 0.697655
TTHB152 conserved hypothetical proteinpTT27 CDS142063 1395 + 0.703943
TTHB153 hypothetical proteinpTT27 CDS143528 459 - 0.631808
TTHB154 transposasepTT27 CDS144854 954 - 0.68239
TTHB155 hypothetical proteinpTT27 CDS147020 1911 + 0.707483
TTHB156 hypothetical proteinpTT27 CDS148901 522 - 0.718391
TTHB157 hypothetical proteinpTT27 CDS149427 720 - 0.672222
TTHB158 hypothetical proteinpTT27 CDS150115 966 - 0.68323
TTHB159 hypothetical proteinpTT27 CDS151073 411 - 0.722628
TTHB160 conserved hypothetical proteinpTT27 CDS151610 1755 + 0.732764
TTHB161 conserved hypothetical proteinpTT27 CDS153354 1086 + 0.732044
TTHB162 conserved hypothetical proteinpTT27 CDS154436 1188 + 0.706229
TTHB163 conserved hypothetical proteinpTT27 CDS155639 861 + 0.711963
TTHB164 conserved hypothetical proteinpTT27 CDS156503 345 + 0.713043
TTHB165 conserved hypothetical proteinpTT27 CDS156850 1047 + 0.723973
TTHB166 hypothetical proteinpTT27 CDS158025 147 + 0.612245
TTHB167 hypothetical proteinpTT27 CDS158494 360 + 0.658333
TTHB168 hypothetical proteinpTT27 CDS158902 435 + 0.652874
TTHB169 conserved hypothetical proteinpTT27 CDS159345 384 + 0.679688
TTHB170 hypothetical proteinpTT27 CDS159849 1332 + 0.678679
TTHB171 conserved hypothetical proteinpTT27 CDS161480 777 - 0.702703
TTHB172 reverse gyrasepTT27 CDS162279 3351 - 0.745449
TTHB173 response regulatorpTT27 CDS166021 654 - 0.700306
TTHB174 sensor histidine kinase-like proteinpTT27 CDS166632 741 - 0.704453
TTHB175 ABC transporter, ATP-binding proteinpTT27 CDS167973 1107 - 0.684734
TTHB176 putative iron ABC transporter, permease proteinpTT27 CDS169095 1698 - 0.671378
TTHB177 iron ABC transporter, periplasmic iron-binding proteinpTT27 CDS170802 1077 - 0.655525
TTHB178 conserved hypothetical proteinpTT27 CDS172275 891 - 0.702581
TTHB179 conserved hypothetical proteinpTT27 CDS173200 657 + 0.65449
TTHB180 conserved hypothetical proteinpTT27 CDS173870 2667 + 0.687289
TTHB181 conserved hypothetical proteinpTT27 CDS176642 2706 + 0.724686
TTHB182 conserved hypothetical proteinpTT27 CDS179344 5388 + 0.731255
TTHB183 hypothetical proteinpTT27 CDS184728 2991 + 0.690405
TTHB184 hypothetical proteinpTT27 CDS187763 696 - 0.737069
TTHB185 conserved hypothetical proteinpTT27 CDS188503 945 - 0.725926
TTHB186 putative transcriptional regulatorpTT27 CDS191138 990 + 0.70101
TTHB187 conserved hypothetical proteinpTT27 CDS192124 2763 + 0.718422
TTHB188 comserved hypothetical proteinpTT27 CDS194936 1509 + 0.688535
TTHB189 conserved hypothetical proteinpTT27 CDS196441 510 + 0.668627
TTHB190 conserved hypothetical proteinpTT27 CDS196947 1116 + 0.674731
TTHB191 conserved hypothetical proteinpTT27 CDS198064 747 + 0.685408
TTHB192 conserved hypothetical proteinpTT27 CDS198797 636 + 0.718553
TTHB193 conserved hypothetical proteinpTT27 CDS199442 978 + 0.712679
TTHB194 conserved hypothetical proteinpTT27 CDS200376 375 + 0.637333
TTHB195 conserved hypothetical proteinpTT27 CDS202082 753 - 0.715803
TTHB196 putative protein required for formate dehydrogenase activitypTT27 CDS202862 846 - 0.756501
TTHB197 probable formate dehydrogenasepTT27 CDS203704 2286 - 0.701662
TTHB198 hypothetical proteinpTT27 CDS206364 1209 + 0.647643
TTHB199 hypothetical proteinpTT27 CDS207574 2844 + 0.70429
TTHB200 transposase-like proteinpTT27 CDS211123 690 - 0.647826
TTHB201 transposase-like proteinpTT27 CDS211784 561 - 0.638146
TTHB202 conserved hypothetical proteinpTT27 CDS212351 381 - 0.742782
TTHB203 hypothetical proteinpTT27 CDS212788 237 - 0.679325
TTHB204 hypothetical proteinpTT27 CDS213224 243 - 0.662551
TTHB205 hypothetical proteinpTT27 CDS213525 348 - 0.66954
TTHB206 hypothetical proteinpTT27 CDS213742 690 - 0.705797
TTHB207 conserved hypothetical proteinpTT27 CDS215119 402 + 0.686567
TTHB208 ribonucleoside-diphosphate reductase, beta subunitpTT27 CDS215591 885 + 0.666667
TTHB209 ribonucleoside-diphosphate reductase, alpha subunitpTT27 CDS216486 1680 + 0.658929
TTHB210 hypothetical proteinpTT27 CDS218295 351 - 0.643875
TTHB211 putative RNA polymerase sigma factorpTT27 CDS218847 582 + 0.704467
TTHB212 conserved hypothetical proteinpTT27 CDS219418 618 + 0.752427
TTHB213 conserved hypothetical proteinpTT27 CDS220114 621 + 0.698873
TTHB214 hypothetical proteihpTT27 CDS220783 186 + 0.677419
TTHB215 conserved hypothetical proteinpTT27 CDS221278 1185 - 0.718987
TTHB216 ABC transporter, periplasmic solute-binding protein-related proteinpTT27 CDS222605 450 - 0.686667
TTHB217 hypothetical proteinpTT27 CDS223066 315 - 0.711111
TTHB218 ABC transporter, ATP-binding proteinpTT27 CDS223370 777 - 0.692407
TTHB219 hemin ABC transporter, permease proteinpTT27 CDS224139 1026 - 0.711501
TTHB220 hemin ABC transporter, periplasmic hemin-binding proteinpTT27 CDS225268 906 - 0.683223
TTHB221 conserved hypothetical proteinpTT27 CDS226170 621 - 0.663446
TTHB222 conserved hypothetical proteinpTT27 CDS226783 321 - 0.676012
TTHB223 conserved hypothetical proteinpTT27 CDS228477 285 - 0.642105
TTHB224 conserved hypothetical proteinpTT27 CDS228758 999 - 0.638639
TTHB225 conserved hypothetical proteinpTT27 CDS229726 585 - 0.661538
TTHB226 conserved hypothetical proteinpTT27 CDS230466 1194 + 0.676717
TTHB227 hypothetical proteinpTT27 CDS231677 2301 + 0.644068
TTHB228 conserved hypothetical proteinpTT27 CDS233979 882 + 0.673469
TTHB229 hypothetical proteinpTT27 CDS234739 915 + 0.66776
TTHB230 putative ATP-dependent RNA helicasepTT27 CDS235620 2454 + 0.656072
TTHB231 conserved hypothetical proteinpTT27 CDS238073 795 + 0.675472
TTHB232 transposasepTT27 CDS239306 1221 - 0.646192
TTHB233 hypothetical proteinpTT27 CDS240849 414 - 0.71256
TTHB234 hypothetical proteinpTT27 CDS241259 231 - 0.69697
TTHB235 conserved hypothetical proteinpTT27 CDS241796 783 - 0.66539
TTHB236 hypothetical proteinpTT27 CDS243210 963 + 0.715472
TTHB237 2-hydroxymuconic semialdehyde hydrolasepTT27 CDS244424 882 - 0.695011
TTHB238 conserved hypothetical proteinpTT27 CDS245274 183 - 0.661202
TTHB239 2-oxopent-4-dienoate hydratasepTT27 CDS245475 777 - 0.709138
TTHB240 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenasepTT27 CDS246259 1509 - 0.663353
TTHB241 4-oxalocrotonate decarboxylasepTT27 CDS247778 696 - 0.722701
TTHB242 4-oxalocrotonate tautomerasepTT27 CDS248470 195 - 0.68718
TTHB243 conserved hypothetical proteinpTT27 CDS248664 447 - 0.697987
TTHB244 phenol hydroxylase component BpTT27 CDS249400 474 - 0.708861
TTHB245 conserved hypothetical proteinpTT27 CDS249870 855 - 0.683041
TTHB246 4-hydroxy-2-ketovalerate aldolasepTT27 CDS250734 1044 - 0.704981
TTHB247 acetaldehyde dehydrogenasepTT27 CDS251774 924 - 0.674242
TTHB248 transcriptional regulator, IclR familypTT27 CDS252681 852 - 0.64554
TTHB249 phenol hydroxylase component ApTT27 CDS253726 1566 + 0.664112
TTHB250 metapyrocatechase (catechol 2,3-dioxygenase)pTT27 CDS255502 975 + 0.660513
TTHB251 ABC transporter, periplasmic solute-binding protein-related proteinpTT27 CDS256540 285 + 0.62807