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2024-04-30 06:30:46

Gene list

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Genomic element: pMT1

Number of genes found: 229

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pMT1 misc_feature83437 2373 + 0.394437
NA pMT1 repeat_unit47970 20 + 0.45
NA pMT1 RBS34021 4 + 0.5
NA pMT1 repeat_unit48097 20 + 0.6
NA pMT1 misc_feature91670 2 +
NA pMT1 misc_feature57267 23790 + 0.499496
NA pMT1 repeat_unit47620 20 + 0.45
NA pMT1 RBS74595 5 + 0.6
NA pMT1 repeat_unit47842 20 + 0.45
NA pMT1 misc_feature47584 2 +
NA pMT1 repeat_unit65383 26 + 0.730769
NA pMT1 misc_feature65260 21 - 0.52381
NA pMT1 RBS49645 5 - 0.6
NA pMT1 repeat_unit37978 708 - 0.464689
NA pMT1 misc_feature38780 1 + 1
NA pMT1 RBS49999 6 - 0.5
NA pMT1 RBS54656 5 - 0.6
NA pMT1 RBS5826 5 - 0.6
NA pMT1 repeat_unit47929 20 + 0.4
NA pMT1 misc_feature59027 84 - 0.5
NA pMT1 RBS50985 6 - 0.5
NA pMT1 repeat_unit45939 20 + 0.5
NA pMT1 repeat_unit65591 26 - 0.730769
NA pMT1 repeat_unit46364 20 + 0.45
NA pMT1 misc_feature52153 24 - 0.666667
NA pMT1 repeat_unit46385 20 + 0.4
NA pMT1 RBS73150 5 - 0.8
NA pMT1 repeat_unit47581 20 + 0.6
NA pMT1 RBS41992 4 - 0.75
NA pMT1 misc_feature36726 1 + 1
NA pMT1 repeat_unit47552 20 + 0.45
NA pMT1 misc_feature24481 2 + 0.5
NA pMT1 misc_feature71231 27 + 0.444444
NA pMT1 repeat_unit73437 36 - 0.388889
NA pMT1 misc_feature62994 1 +
NA pMT1 misc_feature55020 1 + 1
NA pMT1 repeat_unit46343 20 + 0.4
NA pMT1 misc_feature71399 39 + 0.410256
NA pMT1 misc_feature82690 615 + 0.414634
NA pMT1 misc_feature1433 24 + 0.625
NA pMT1 repeat_unit47653 20 + 0.45
NA pMT1 misc_feature51532 213 - 0.539906
NA pMT1 RBS23123 5 - 0.6
NA pMT1 misc_feature60 1 +
NA pMT1 misc_feature30123 444 - 0.574324
NA pMT1 misc_feature76004 84 + 0.380952
NA pMT1 misc_feature61892 1 + 1
NA pMT1 misc_feature57765 24 - 0.625
NA pMT1 RBS42223 5 - 0.8
NA pMT1 RBS53568 5 - 0.6
NA pMT1 misc_feature73419 1 +
NA pMT1 misc_feature8702 240 - 0.554167
NA pMT1 misc_feature80218 75 - 0.52
NA pMT1 misc_feature37593 1 + 1
NA pMT1 misc_feature30522 24 - 0.625
NA pMT1 RBS39329 5 - 0.6
NA pMT1 RBS2639 5 - 0.6
NA pMT1 RBS52355 5 - 0.6
NA pMT1 RBS6528 4 - 0.75
NA pMT1 RBS20241 4 - 0.75
NA pMT1 misc_feature33281 246 + 0.52439
NA pMT1 repeat_unit47889 20 + 0.5
NA pMT1 misc_feature52652 906 - 0.529801
NA pMT1 misc_feature55208 1 + 1
NA pMT1 misc_feature87648 552 + 0.501812
NA pMT1 RBS31384 5 - 0.6
NA pMT1 misc_feature32569 1 +
NA pMT1 RBS12571 4 - 0.75
NA pMT1 misc_feature6633 1 + 1
NA pMT1 misc_feature875 1 +
NA pMT1 misc_feature79849 1137 - 0.496042
NA pMT1 RBS79317 5 - 0.8
NA pMT1 repeat_unit46025 20 + 0.45
NA pMT1 misc_feature52033 180 - 0.555556
NA pMT1 misc_feature11902 1 + 1
NA pMT1 misc_feature61942 5 + 0.8
NA pMT1 misc_feature67415 24 - 0.583333
NA pMT1 misc_feature34062 33 + 0.454545
NA pMT1 RBS11784 6 - 0.666667
NA pMT1 repeat_unit46322 20 + 0.35
NA pMT1 misc_feature71225 588 + 0.494898
NA pMT1 repeat_unit45960 20 + 0.45
NA pMT1 repeat_unit48010 20 + 0.5
NA pMT1 misc_feature61939 1 + 1
NA pMT1 misc_feature48269 8998 + 0.507335
NA pMT1 repeat_unit73165 36 + 0.5
NA pMT1 misc_feature8987 258 - 0.507752
NA pMT1 misc_feature81056 15125 + 0.46519
NA pMT1 misc_feature49930 2 + 1
NA pMT1 repeat_unit46406 20 + 0.5
NA pMT1 misc_feature84247 33 + 0.484848
NA pMT1 RBS82553 6 + 0.666667
NA pMT1 misc_feature38465 1 + 1
NA pMT1 misc_feature81937 138 - 0.384058
NA pMT1 RBS48340 6 - 0.666667
NA pMT1 misc_feature41845 24 - 0.666667
NA pMT1 misc_feature1 48266 + 0.514275
NA pMT1 misc_feature111 84 + 0.5
NA pMT1 repeat_unit1 1959 + 0.515059
NA pMT1 misc_feature39700 1 + 1
NA pMT1 misc_feature45308 1 + 1
NA pMT1 misc_feature51408 1 + 1
NA pMT1 repeat_unit46002 20 + 0.5
NA pMT1 misc_feature17613 1 + 1
NA pMT1 repeat_unit46428 20 + 0.35
NA pMT1 misc_feature27700 24 - 0.666667
NA pMT1 repeat_unit79734 1323 - 0.486772
NA pMT1 misc_feature39563 1 + 1
NA pMT1 repeat_unit47765 20 + 0.4
NA pMT1 repeat_unit57266 1955 - 0.514578
NA pMT1 repeat_unit47803 20 + 0.5
NA pMT1 misc_feature1 57266 + 0.513167
NA pMT1 misc_feature92276 24 + 0.5
NA pMT1 misc_feature50914 33 - 0.575758
NA pMT1 RBS30784 5 - 0.8
NA pMT1 RBS37893 5 - 0.8
NA pMT1 repeat_unit62824 31 + 0.709677
NA pMT1 repeat_unit63038 31 - 0.645161
NA pMT1 misc_feature82894 54 + 0.462963
NA pMT1 misc_feature59221 22286 + 0.4965
NA pMT1 repeat_unit45981 20 + 0.4
NA pMT1 misc_feature81916 261 - 0.371648
NA pMT1 RBS36037 5 + 0.6
NA pMT1 repeat_unit48050 20 + 0.4
NA pMT1 misc_feature35188 2 +
NA pMT1 misc_feature69217 312 - 0.451923
YMT1.42Ac hypothetical protein YPMT1.42AcpMT1 CDS44876 147 - 0.455782
YPMT1.01 putative transposasepMT1 CDS87 1023 + 0.527859
YPMT1.02 putative transposasepMT1 CDS1106 783 + 0.50447
YPMT1.03c hypothetical protein YPMT1.03cpMT1 CDS2022 609 - 0.456486
YPMT1.04c putative phage tail proteinpMT1 CDS2932 2889 - 0.499135
YPMT1.05c hypothetical protein YPMT1.05cpMT1 CDS5901 618 - 0.496764
YPMT1.06c putative phage tail proteinpMT1 CDS6536 4638 - 0.526304
YPMT1.07c putative phage tail proteinpMT1 CDS11189 588 - 0.527211
YPMT1.08c putative phage tail proteinpMT1 CDS11764 798 - 0.551378
YPMT1.09c putative phage tail proteinpMT1 CDS12554 732 - 0.52459
YPMT1.10c putative phage tail proteinpMT1 CDS13342 336 - 0.488095
YPMT1.11c putative membrane proteinpMT1 CDS13719 4578 - 0.56706
YPMT1.12c hypothetical protein YPMT1.12cpMT1 CDS18304 270 - 0.551852
YPMT1.13c hypothetical protein YPMT1.13cpMT1 CDS18654 318 - 0.5
YPMT1.14c hypothetical protein YPMT1.14cpMT1 CDS19031 747 - 0.535475
YPMT1.15c hypothetical protein YPMT1.15cpMT1 CDS19852 384 - 0.466146
YPMT1.16c hypothetical protein YPMT1.16cpMT1 CDS20237 474 - 0.544304
YPMT1.17c hypothetical protein YPMT1.17cpMT1 CDS20701 459 - 0.535948
YPMT1.18c hypothetical protein YPMT1.18cpMT1 CDS21143 834 - 0.544365
YPMT1.19c hypothetical protein YPMT1.19cpMT1 CDS21976 435 - 0.51954
YPMT1.20c hypothetical protein YPMT1.20cpMT1 CDS22454 663 - 0.526395
YPMT1.21c hypothetical protein YPMT1.21cpMT1 CDS23191 876 - 0.539954
YPMT1.22c hypothetical protein YPMT1.22cpMT1 CDS24093 834 - 0.556355
YPMT1.23c hypothetical protein YPMT1.23cpMT1 CDS24949 1590 - 0.509434
YPMT1.24c hypothetical protein YPMT1.24cpMT1 CDS26557 1257 - 0.540971
YPMT1.25Ac hypothetical protein YPMT1.25AcpMT1 CDS28653 267 - 0.524345
YPMT1.25c hypothetical protein YPMT1.25cpMT1 CDS27816 642 - 0.556075
YPMT1.26Ac hypothetical protein YPMT1.26AcpMT1 CDS29825 255 - 0.52549
YPMT1.26c hypothetical protein YPMT1.26cpMT1 CDS28929 900 - 0.556667
YPMT1.27c putative ABC transporter ATP-binding proteinpMT1 CDS30072 699 - 0.553648
YPMT1.28c hypothetical protein YPMT1.28cpMT1 CDS30707 669 - 0.559043
YPMT1.29c hypothetical protein YPMT1.29cpMT1 CDS31375 699 - 0.527897
YPMT1.30 hypothetical protein YPMT1.30pMT1 CDS32138 1560 + 0.514103
YPMT1.31 hypothetical protein YPMT1.31pMT1 CDS33700 279 + 0.458781
YPMT1.32 putative lipoproteinpMT1 CDS34038 423 + 0.541371
YPMT1.33 putative transcriptional regulatorpMT1 CDS34465 528 + 0.517045
YPMT1.34 hypothetical protein YPMT1.34pMT1 CDS35314 651 + 0.394777
YPMT1.34A hypothetical protein YPMT1.34ApMT1 CDS36049 228 + 0.372807
YPMT1.35c hypothetical protein YPMT1.35cpMT1 CDS36915 483 - 0.503106
YPMT1.36c hypothetical protein YPMT1.36cpMT1 CDS37603 288 - 0.524306
YPMT1.37c putative transposasepMT1 CDS38084 459 - 0.457516
YPMT1.38c hypothetical protein YPMT1.38cpMT1 CDS38751 570 - 0.52807
YPMT1.39c hypothetical protein YPMT1.39cpMT1 CDS39333 747 - 0.497992
YPMT1.3Ac hypothetical protein YPMT1.3AcpMT1 CDS2723 213 - 0.42723
YPMT1.40Ac hypothetical protein YPMT1.40AcpMT1 CDS41994 225 - 0.484444
YPMT1.40c putative exonuclease subunit 2pMT1 CDS40069 1917 - 0.529995
YPMT1.41c putative exonuclease subunit 1pMT1 CDS42215 1086 - 0.540516
YPMT1.42 putative periplasmic proteinpMT1 CDS43716 1023 + 0.449658
YPMT1.43c hypothetical protein YPMT1.43cpMT1 CDS45098 645 - 0.528682
YPMT1.44 putative replication protein ApMT1 CDS46487 1065 + 0.514554
YPMT1.45c hypothetical protein YPMT1.45cpMT1 CDS48120 216 - 0.550926
YPMT1.46Ac hypothetical protein YPMT1.46AcpMT1 CDS48664 180 - 0.455556
YPMT1.46Bc hypothetical protein YPMT1.46BcpMT1 CDS48884 276 - 0.467391
YPMT1.46c hypothetical protein YPMT1.46cpMT1 CDS48332 336 - 0.505952
YPMT1.47c hypothetical protein YPMT1.47cpMT1 CDS49227 411 - 0.559611
YPMT1.48c hypothetical protein YPMT1.48cpMT1 CDS49621 372 - 0.497312
YPMT1.49Ac hypothetical protein YPMT1.49AcpMT1 CDS50980 201 - 0.447761
YPMT1.49c putative lipoproteinpMT1 CDS50146 831 - 0.515042
YPMT1.50Ac hypothetical protein YPMT1.50AcpMT1 CDS52350 267 - 0.546816
YPMT1.50c putative recombinasepMT1 CDS51271 1077 - 0.545961
YPMT1.51c putative exonucleasepMT1 CDS52616 945 - 0.526984
YPMT1.52c hypothetical protein YPMT1.52cpMT1 CDS53621 1029 - 0.519922
YPMT1.53c hypothetical protein YPMT1.53cpMT1 CDS54769 474 - 0.5
YPMT1.54 hypothetical protein YPMT1.54pMT1 CDS55745 564 + 0.512411
YPMT1.55c hypothetical protein YPMT1.55cpMT1 CDS56338 444 - 0.518018
YPMT1.56c putative DNA polymerase III pseudogenepMT1 pseudo56778 489 - 0.511247
YPMT1.57c putative IS100 transposasepMT1 CDS57333 783 - 0.50447
YPMT1.58c putative transposasepMT1 CDS58112 1023 - 0.527859
YPMT1.59c putative DNA-binding proteinpMT1 CDS59258 2010 - 0.61393
YPMT1.60c hypothetical protein YPMT1.60cpMT1 CDS61340 231 - 0.593074
YPMT1.61c putative antirestriction proteinpMT1 CDS62283 507 - 0.538462
YPMT1.62c hypothetical protein YPMT1.62cpMT1 CDS63188 780 - 0.552564
YPMT1.63Ac hypothetical protein YPMT1.63AcpMT1 CDS64451 222 - 0.536036
YPMT1.63c hypothetical protein YPMT1.63cpMT1 CDS64021 492 - 0.558943
YPMT1.64c putative DNA methylasepMT1 CDS64672 678 - 0.581121
YPMT1.65 hypothetical protein YPMT1.65pMT1 CDS65742 309 + 0.504854
YPMT1.66c putative DNA-binding proteinpMT1 CDS66212 1398 - 0.483548
YPMT1.67c putative partitioning protein BpMT1 CDS67988 972 - 0.447531
YPMT1.68A hypothetical protein YPMT1.68ApMT1 CDS70463 228 + 0.434211
YPMT1.68c putative partitioning protein ApMT1 CDS68956 1206 - 0.451907
YPMT1.69 hypothetical protein YPMT1.69pMT1 CDS70690 327 + 0.434251
YPMT1.70 putative resolvasepMT1 CDS71216 621 + 0.495974
YPMT1.71 hypothetical protein YPMT1.71pMT1 CDS71857 987 + 0.507599
YPMT1.72c hypothetical protein YPMT1.72cpMT1 CDS72866 276 - 0.518116
YPMT1.73 hypothetical protein YPMT1.73pMT1 CDS73881 489 + 0.435583
YPMT1.74 murine toxinpMT1 CDS74612 1599 + 0.380238
YPMT1.75c hypothetical protein YPMT1.75cpMT1 CDS76455 471 - 0.558386
YPMT1.76 hypothetical protein YPMT1.76pMT1 CDS76996 309 + 0.566343
YPMT1.76A hypothetical protein YPMT1.76ApMT1 CDS77219 372 + 0.526882
YPMT1.77c pMT1 CDS77583 84 - 0.416667
YPMT1.78 putative pseudogenepMT1 pseudo77764 324 + 0.484568
YPMT1.79c putative transposasepMT1 CDS78286 1023 - 0.519062
YPMT1.80c putative transposasepMT1 CDS79777 1209 - 0.496278
YPMT1.81c putative F1 operon positive regulatory proteinpMT1 CDS81334 924 - 0.333333
YPMT1.82 putative F1 chaperone proteinpMT1 CDS82567 777 + 0.405405
YPMT1.83 putative F1 capsule anchoring proteinpMT1 CDS83368 2502 + 0.396083
YPMT1.84 putative F1 capsule antigenpMT1 CDS85950 513 + 0.42885
YPMT1.85 putative integrasepMT1 CDS87147 1179 + 0.478372
YPMT1.86A hypothetical protein YPMT1.86ApMT1 CDS88969 213 + 0.43662
YPMT1.86c hypothetical protein YPMT1.86cpMT1 CDS88320 387 - 0.496124
YPMT1.87 putative porphyrin biosynthetic proteinpMT1 CDS89291 2367 + 0.52049
YPMT1.88 putative porphyrin biosynthetic proteinpMT1 CDS91754 1236 + 0.526699
YPMT1.89 putative DNA polymerase III pseudogenepMT1 pseudo93170 3039 + 0.549852