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2024-05-17 03:22:47

Gene list

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Genomic element: pPCP1

Number of genes found: 20

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pPCP1 repeat_unit2413 20 - 0.6
NA pPCP1 misc_feature7007 30 + 0.466667
NA pPCP1 repeat_unit2265 19 + 0.578947
NA pPCP1 repeat_unit2321 20 + 0.55
NA pPCP1 misc_feature2924 1253 + 0.537111
NA pPCP1 repeat_unit1 1954 + 0.51433
NA pPCP1 misc_feature7118 51 + 0.45098
NA pPCP1 misc_feature5927 8 +
NA pPCP1 misc_feature8528 5 +
NA pPCP1 misc_feature1433 24 + 0.625
NA pPCP1 misc_feature5910 8 +
YPPCP1.01 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pPCP1 CDS87 1023 + 0.527859
YPPCP1.02 putative ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pPCP1 CDS1106 783 + 0.50447
YPPCP1.03 putative replication regulatory proteinSubName: Full=Putative replication regulatory protein; pPCP1 CDS2925 195 + 0.502564
YPPCP1.04 pesticin immunity proteinSubName: Full=Pesticin immunity protein; SubName: Full=Pesticin immununity protein; pPCP1 CDS4355 426 + 0.319249
YPPCP1.05c pesticinSubName: Full=Pesticin; pPCP1 CDS4815 1074 - 0.391993
YPPCP1.06 hypothetical proteinSubName: Full=Uncharacterized protein; pPCP1 CDS6006 417 + 0.491607
YPPCP1.07 coagulase/fibrinolysin precursorRecName: Full=Coagulase/fibrinolysin; EC=3.4.23.48; AltName: Full=Plasminogen activator; Flags: Precursor; pPCP1 CDS6665 939 + 0.419595
YPPCP1.08c putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; SubName: Full=Transcriptional regulator; pPCP1 CDS7790 300 - 0.456667
YPPCP1.09c hypothetical proteinSubName: Full=Uncharacterized protein; pPCP1 CDS8089 348 - 0.439655