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2024-05-03 05:56:06

Gene list

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Genomic element: pCD1

Number of genes found: 76

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA transposasepCD1 CDS1939 405 - 0.454321
NA unknownpCD1 CDS56297 192 + 0.380208
NA unknownpCD1 CDS21100 279 + 0.433692
NA pCD1 repeat_region45494 630 - 0.546032
NA pCD1 pseudo29778 261 - 0.383142
NA transposasepCD1 CDS87 1023 + 0.527859
NA unknownpCD1 CDS34860 969 - 0.431373
NA putative transposase homologpCD1 CDS53938 381 - 0.509186
NA putative transposasepCD1 CDS46241 1173 + 0.546462
NA pCD1 repeat_region38624 393 + 0.559796
NA pCD1 pseudo45494 630 - 0.546032
NA unknownpCD1 CDS21365 372 + 0.526882
NA transposasepCD1 CDS1109 780 + 0.503846
NA putative transposasepCD1 CDS49594 267 - 0.479401
NA IS1222 hypothetical protein homologpCD1 CDS67146 504 - 0.484127
NA unknownpCD1 CDS21733 369 + 0.495935
NA pCD1 repeat_region29778 261 - 0.383142
NA pCD1 pseudo70161 344 - 0.453488
NA pCD1 pseudo38624 393 + 0.559796
NA unknownpCD1 CDS22098 345 + 0.46087
NA unknownpCD1 CDS29345 168 - 0.428571
NA pCD1 repeat_region70161 344 - 0.453488
NA putative transposasepCD1 CDS47413 432 + 0.569444
NA putative transposasepCD1 CDS32145 300 - 0.436667
NA endonuclease homologpCD1 CDS58681 249 + 0.493976
lcrD low calcium response locus protein DpCD1 CDS22429 2115 + 0.463357
lcrF/virF thermoregulatory transcription factor LcrFpCD1 CDS11299 816 - 0.416667
lcrG low calcium response locus protein GpCD1 CDS25022 288 + 0.46875
lcrH low calcium response locus protein HpCD1 CDS26304 507 + 0.441815
lcrR low calcium response locus protein RpCD1 CDS24540 441 + 0.489796
lcrS low calcium response locus protein S homologpCD1 CDS2379 267 - 0.434457
lcrV V antigenpCD1 CDS25311 981 + 0.377166
repA replication protein RepA homologpCD1 CDS59618 879 + 0.5438
repB replication protein RepB homologpCD1 CDS59067 255 + 0.423529
sopA SopA homologpCD1 CDS40080 1209 + 0.434243
sopB SopB homologpCD1 CDS41417 834 + 0.406475
sycE YopE chaperone SycEpCD1 CDS45039 393 + 0.409669
sycH YopH chaperone SycH protein homologpCD1 CDS48188 426 + 0.41784
tnpA transposase (Tn1000) homologpCD1 CDS51626 2316 + 0.519862
tnpR transposon gamma-delta resolvase (transposon TN1000) homologpCD1 CDS50911 552 - 0.46558
traI DNA helicase I homologpCD1 CDS56928 417 + 0.556355
virG pre-lipoprotein VirG homologpCD1 CDS12238 396 - 0.444444
yadA' pCD1 pseudo54924 1304 + 0.431748
yadA' pCD1 pseudo54924 1304 + 0.431748
ylpA pCD1 pseudo37360 751 + 0.475366
ylpA pCD1 pseudo37360 751 + 0.475366
yopB YopB homologpCD1 CDS26788 1206 + 0.466833
yopD YopD homologpCD1 CDS28012 921 + 0.431053
yopE YopEpCD1 CDS44186 660 - 0.510606
yopH YopHpCD1 CDS68243 1407 + 0.474058
yopK/yopQ YopK (YopQ) homologpCD1 CDS36328 549 + 0.335155
yopM outer membrane protein YopMpCD1 CDS30873 1230 + 0.389431
yopN outer membrane protein YopN (LcrE) homologpCD1 CDS20238 882 + 0.461451
yopP YopP homologpCD1 CDS65694 867 + 0.347174
ypkA protein kinase A homologpCD1 CDS63100 2199 + 0.481128
yscA Yop proteins translocation protein A homologpCD1 CDS11122 99 - 0.313131
yscB Yop proteins translocation protein B homologpCD1 CDS10483 414 - 0.417874
yscC Yop proteins translocation protein C homologpCD1 CDS8654 1824 - 0.454496
yscD Yop proteins translocation protein D homologpCD1 CDS7398 1260 - 0.46746
yscE Yop proteins translocation protein E homologpCD1 CDS7201 201 - 0.422886
yscF Yop proteins translocation protein F homologpCD1 CDS6937 264 - 0.416667
yscG Yop proteins translocation protein G homologpCD1 CDS6588 348 - 0.439655
yscH Yop proteins translocation protein H homologpCD1 CDS6094 498 - 0.429719
yscI Yop proteins translocation protein I homologpCD1 CDS5746 348 - 0.468391
yscJ Yop proteins translocation lipoprotein JpCD1 CDS5005 735 - 0.428571
yscK Yop proteins translocation protein K homologpCD1 CDS4376 630 - 0.485714
yscL Yop proteins translocation protein L homologpCD1 CDS3765 666 - 0.448949
yscM Yop proteins translocation protein M homologpCD1 CDS3193 348 - 0.479885
yscN Yops secretion ATPase YscN homologpCD1 CDS18721 1320 - 0.508333
yscO Yop proteins translocation protein OpCD1 CDS18260 465 - 0.458065
yscP Yop proteins translocation protein PpCD1 CDS16893 1368 - 0.486842
yscQ Yop proteins translocation protein QpCD1 CDS15973 924 - 0.481602
yscR Yop proteins translocation protein R homologpCD1 CDS15323 654 - 0.43578
yscS Yop proteins translocation protein S homologpCD1 CDS15055 267 - 0.453184
yscT Yop proteins translocation protein T homologpCD1 CDS14273 786 - 0.428753
yscU Yop proteins translocation protein U homologpCD1 CDS13209 1065 - 0.431925