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2024-05-18 08:42:40

Gene list

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Genomic element: pSK41

Number of genes found: 58

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Staphylococcus aureus
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pSK41 sig_peptide755 108 + 0.25
NA membrane proteinSubName: Full=Membrane protein; pSK41 CDS16539 747 - 0.27577
NA unknownSubName: Full=TrsO; SubName: Full=Uncharacterized protein; pSK41 CDS37179 168 + 0.255952
NA unknownSubName: Full=Uncharacterized protein; pSK41 CDS4531 1617 + 0.248609
NA unknownSubName: Full=Uncharacterized protein; pSK41 CDS3618 780 + 0.251282
NA unknownSubName: Full=Acetyltransferase, GNAT family; SubName: Full=Putative acetyltransferase; SubName: Full=Uncharacterized protein; pSK41 CDS42112 393 + 0.246819
NA unknownSubName: Full=DNA recombination protein RmuC; SubName: Full=Uncharacterized protein; pSK41 CDS10316 273 + 0.212454
NA unknownSubName: Full=ParM protein; SubName: Full=Uncharacterized protein; pSK41 CDS11188 1041 + 0.292988
NA unknownSubName: Full=Similar to Teicoplanin resistance associated membrane protein TcaA; SubName: Full=Teicoplanin resistance associated membrane protein TcaA-like protein; SubName: Full=Uncharacterized protein; Flags: Precursor; pSK41 CDS755 1272 + 0.243711
NA unknownSubName: Full=Helix-turn-helix domain protein; SubName: Full=Uncharacterized protein; pSK41 CDS12564 261 - 0.321839
NA unknownSubName: Full=Uncharacterized protein; pSK41 CDS2068 417 - 0.280576
NA unknownSubName: Full=Conserved domain protein; SubName: Full=DNA-binding protein ParR; SubName: Full=Plasmid segregation protein ParR; SubName: Full=Uncharacterized protein; pSK41 CDS12231 330 + 0.330303
NA LtrC-like proteinSubName: Full=LtrC-like protein; SubName: Full=Putative LtrC-like protein; pSK41 CDS6350 1725 + 0.271304
NA unknown pSK41 mat_peptide863 1161 + 0.243755
NA pSK41 misc_feature10221 2 - 1
NA putative membrane proteinSubName: Full=Membrane protein, putative; SubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pSK41 CDS10692 234 + 0.252137
NA unknownSubName: Full=Uncharacterized protein; pSK41 CDS72 615 + 0.273171
IS256 pSK41 repeat_region44024 425 + 0.348235
IS256 pSK41 repeat_region41681 425 + 0.348235
IS257 pSK41 repeat_region17578 791 + 0.34134
IS257 pSK41 repeat_region14227 790 + 0.341772
IS257 pSK41 repeat_region22925 789 + 0.340938
IS257 pSK41 repeat_region37328 791 + 0.340076
IS257 pSK41 repeat_region44449 791 + 0.345133
IS257 pSK41 repeat_region45657 789 + 0.346008
IS257 pSK41 repeat_region40890 731 + 0.336525
aacA-aphD bifunctional aminoglycoside modifying enzyme AacA-AphDRecName: Full=Bifunctional AAC/APH; Includes: RecName: Full=6-aminoglycoside N-acetyltransferase; EC=2.3.1.-; AltName: Full=AAC(6); Includes: RecName: Full=2-aminoglycoside phosphotransferase; EC=2.7.1.-; AltName: Full=APH(2); pSK41 CDS42505 1440 + 0.246528
aadD aminoglycoside adenyltransferase AadDSubName: Full=AadD; SubName: Full=Aminoglycoside O-adenyl transferase; SubName: Full=Aminoglycoside adenyltransferase AadD; SubName: Full=Kanamycin nucleotidyltransferase; EC=2.7.7.-; SubName: Full=Kanamycin resistance protein; SubName: Full=O-nucleotidyltransferase(4); pSK41 CDS21861 771 - 0.422827
artA putative regulator of transfer genes ArtASubName: Full=Putative regulator of transfer genes ArtA; SubName: Full=Regulator of transfer gene ArtA; SubName: Full=Transcriptional regulator TrsN; SubName: Full=TrsN protein; pSK41 CDS23764 189 - 0.259259
ble bleomycin resistance protein BleRecName: Full=Bleomycin resistance protein; Short=BRP; AltName: Full=Bleomycin-binding protein; pSK41 CDS21240 399 - 0.403509
nes oriT nickase NesSubName: Full=Nicking enzyme; SubName: Full=OriT nickase; SubName: Full=OriT nickase Nes; SubName: Full=OriT relaxase Nes; pSK41 CDS8115 1998 - 0.264765
pre PreSubName: Full=Plasmid recombinase Pre; SubName: Full=Plasmid recombination enzyme; SubName: Full=Pre; SubName: Full=Recombination/mobilization protein; pSK41 CDS19471 1263 - 0.338084
rep putative replication initiation protein RepSubName: Full=Putative replication initiation protein Rep; SubName: Full=Putative replication initiator protein Rep; SubName: Full=Replication initiator protein; pSK41 CDS13205 960 + 0.258333
rep(RC) pSK41 pseudo15017 2562 + 0.297814
rep(RC) putative replication initiation protein Rep(RC)SubName: Full=Putative replication initiation protein Rep(RC); SubName: Full=Putative replication initiator protein Rep(RC); SubName: Full=Replication protein; pSK41 CDS38162 924 + 0.288961
repU pSK41 pseudo18369 4556 - 0.356453
res putative resolvase ResSubName: Full=Putative resolvase Res; SubName: Full=Resolvase; SubName: Full=Resolvase/integrase; pSK41 CDS2779 558 + 0.31362
smr multidrug resistance efflux protein SmrSubName: Full=Antiseptic resistance protein; SubName: Full=Multi-drug efflux pump; SubName: Full=Multidrug efflux protein; SubName: Full=Multidrug resistance efflux protein QacC; SubName: Full=Multidrug resistance efflux protein Smr; SubName: Full=Quaternary ammonium compound-resistance protein QacC; SubName: Full=Smr protein; pSK41 CDS40055 324 - 0.290123
tnpA putative transposase TnpASubName: Full=IS431mec transposase; SubName: Full=IS431mec-like transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Putative transposase TnpB; SubName: Full=Putative transposase TnpD; SubName: Full=Transposase; SubName: Full=Transposase TnpB; pSK41 CDS14283 675 + 0.346667
tnpB putative transposase TnpBSubName: Full=IS431mec transposase; SubName: Full=IS431mec-like transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Putative transposase TnpB; SubName: Full=Putative transposase TnpD; SubName: Full=Transposase; SubName: Full=Transposase TnpB; pSK41 CDS17635 675 + 0.346667
tnpC putative transposase TnpCSubName: Full=IS431mec transposase; SubName: Full=Putative transposase Tnp(693A); SubName: Full=Putative transposase TnpC; SubName: Full=Putative transposase TnpE; SubName: Full=Transposase; SubName: Full=Transposase TnpC; pSK41 CDS22981 675 + 0.345185
tnpD putative transposase TnpDSubName: Full=Putative transposase TnpD; pSK41 CDS37384 675 + 0.343704
tnpE putative transposase TnpESubName: Full=IS257 transposase TnpE; SubName: Full=IS431mec transposase; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpD; SubName: Full=Putative transposase TnpE; SubName: Full=TnpE; SubName: Full=Transposase; pSK41 CDS40946 675 + 0.340741
tnpF putative transposase TnpFSubName: Full=IS257 transposase TnpF; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpF; pSK41 CDS44517 666 - 0.348348
tnpG putative transposase TnpGSubName: Full=Putative transposase; SubName: Full=Putative transposase Tnp(693B); SubName: Full=Putative transposase TnpG; SubName: Full=Transposase for IS-like element; pSK41 CDS45713 675 + 0.351111
traA TraASubName: Full=TraA; SubName: Full=TrsA protein; pSK41 CDS24124 975 + 0.306667
traB putative membrane protein TraBSubName: Full=Putative membrane protein TraB; SubName: Full=Putative membrane protein TrsB; SubName: Full=TraB; SubName: Full=TrsB protein; pSK41 CDS25115 318 + 0.358491
traC putative membrane protein TraCSubName: Full=Putative membrane protein TraC; SubName: Full=Putative membrane protein TrsC; SubName: Full=TraC; SubName: Full=TrsC protein; pSK41 CDS25492 408 + 0.281863
traD TraDSubName: Full=TraD; SubName: Full=TrsD protein; pSK41 CDS25886 684 + 0.273392
traE putative ATPase TraESubName: Full=Putative ATPase TraE; SubName: Full=Putative ATPase TrsE; SubName: Full=TrsE protein; pSK41 CDS26584 2019 + 0.28529
traF putative membrane protein TraFSubName: Full=Putative membrane protein TraF; SubName: Full=Putative membrane protein TrsF; SubName: Full=TraF; SubName: Full=TrsF protein; pSK41 CDS28614 1281 + 0.26776
traG putative membrane protein TraGSubName: Full=Putative membrane protein TraG; SubName: Full=Putative membrane protein TrsG; SubName: Full=TraG; pSK41 CDS29912 1077 + 0.390901
traH lipoprotein TraHSubName: Full=Conjugal transfer protein traH; SubName: Full=Lipoprotein TraH; SubName: Full=Lipoprotein TrsH; SubName: Full=TraH; SubName: Full=TrsH protein; pSK41 CDS30998 486 + 0.269547
traI putative topoisomerase TraIRecName: Full=DNA topoisomerase; EC=5.99.1.2; pSK41 CDS31499 2103 + 0.271517
traJ putative membrane protein TraJSubName: Full=Putative membrane protein TraJ; SubName: Full=TraJ; SubName: Full=TrsJ protein; pSK41 CDS33617 465 + 0.273118
traK putative membrane protein TraKSubName: Full=Putative membrane protein TraK; SubName: Full=TraK; SubName: Full=TraK-like protein; SubName: Full=TrsK protein; pSK41 CDS34078 1641 + 0.29738
traL putative membrane protein TraLSubName: Full=Putative membrane protein TraL; pSK41 CDS35796 918 + 0.308279
traM putative single-stranded DNA binding protein TraMRecName: Full=Single-stranded DNA-binding protein; pSK41 CDS36730 393 + 0.287532