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2024-05-07 17:09:08

Gene list

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Genomic element: pSOL1

Number of genes found: 176

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Clostridium acetobutylicum ATCC 824, ATCC 824
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
CAP0001 OxidoreductasepSOL1 CDS43 756 + 0.283069
CAP0002 Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domainpSOL1 CDS1359 2586 + 0.32908
CAP0003 Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domainpSOL1 CDS4107 2574 + 0.344211
CAP0004 Cysteine proteasepSOL1 CDS6984 948 + 0.331224
CAP0005 Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI familypSOL1 CDS8059 315 - 0.228571
CAP0006 GntR family HTH transcriptional regulatorpSOL1 CDS8487 714 - 0.344538
CAP0007 Hypothetical proteinpSOL1 CDS9207 84 - 0.27381
CAP0008 Hypothetical proteinpSOL1 CDS9320 207 - 0.26087
CAP0009 Response regulator (CheY + HTH domains)pSOL1 CDS10015 1080 + 0.275926
CAP0010 Beta_glucosidasepSOL1 CDS11140 1410 + 0.339007
CAP0012 Pediocin immunity protein, PedBpSOL1 CDS13016 333 + 0.315315
CAP0013 FAD dependent dehydrogenasepSOL1 CDS13430 1110 - 0.288288
CAP0014 Protein tyrosine phosphatase II superfamily proteinpSOL1 CDS14568 960 - 0.298958
CAP0015 GLPQ related phosphodiesterasepSOL1 CDS15822 846 + 0.27305
CAP0016 Hypothetical proteinpSOL1 CDS16664 510 - 0.286275
CAP0017 Spore germination protein, GRKBpSOL1 CDS17674 1095 - 0.316895
CAP0018 Hypothetical proteinpSOL1 CDS18798 219 - 0.255708
CAP0019 Spore germination protein, GRKCpSOL1 CDS19035 1185 - 0.318987
CAP0020 Spore germination protein, GRKApSOL1 CDS20244 1602 - 0.337703
CAP0021 Hypothetical proteinpSOL1 CDS21876 216 - 0.240741
CAP0022 Spore germination protein, GRKBpSOL1 CDS22283 1086 - 0.302026
CAP0023 Hypothetical proteinpSOL1 CDS23499 483 - 0.283644
CAP0024 MarR family HTH transcriptional regulatorpSOL1 CDS24308 462 - 0.307359
CAP0025 Pyruvate decarboxylasepSOL1 CDS24954 1665 + 0.344745
CAP0026 Hypothetical proteinpSOL1 CDS26782 579 + 0.279793
CAP0027 Predicted amino acid permeasespSOL1 CDS27517 1848 + 0.349026
CAP0028 HTH transcriptional regulator TetR familypSOL1 CDS29416 564 - 0.306738
CAP0029 Permease MDR-relatedpSOL1 CDS30112 1200 + 0.345
CAP0030 IsochorismatasepSOL1 CDS31330 564 + 0.351064
CAP0031 Transcriptional activator HLYU, HTH of ArsR familypSOL1 CDS31999 288 + 0.298611
CAP0032 Rhodanese-like domainpSOL1 CDS32400 321 + 0.280374
CAP0033 Hypothetical proteinpSOL1 CDS32783 357 + 0.327731
CAP0034 Rhodanese-like domainpSOL1 CDS33317 321 + 0.302181
CAP0035 Aldehyde-alcohol dehydrogenase, ADHE1pSOL1 CDS33722 2577 - 0.324796
CAP0036 Uncharacterized, ortholog of YgaT gene of B.subtillispSOL1 CDS36772 729 - 0.348422
CAP0037 Uncharacterized, ortholog of YgaS gene of B.subtillispSOL1 CDS37519 630 - 0.290476
CAP0038 Uncharacterized conserved protein, YCII familypSOL1 CDS38411 291 + 0.254296
CAP0039 Hypothetical proteinpSOL1 CDS38787 420 - 0.333333
CAP0040 Xre family DNA-binding domain and TPR repeats containing proteinpSOL1 CDS39498 1332 - 0.265015
CAP0041 Hypothetical proteinpSOL1 CDS41127 381 + 0.270341
CAP0042 Hypothetical proteinpSOL1 CDS41674 549 + 0.304189
CAP0043 Membrane flavodoxin oxidoreductasepSOL1 CDS42274 1305 - 0.311877
CAP0044 Hypothetical proteinpSOL1 CDS43702 996 - 0.290161
CAP0045 Glycosyl transferasepSOL1 CDS44778 1221 - 0.318591
CAP0046 TetR family HTH transcriptional regulatorpSOL1 CDS46233 567 + 0.285714
CAP0047 Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolasepSOL1 CDS46802 747 - 0.318608
CAP0048 Related to methyl-accepting chemotaxis proteinpSOL1 CDS47893 1149 + 0.353351
CAP0049 Permease, MDR relatedpSOL1 CDS49363 1227 - 0.357783
CAP0050 Para-nitrobenzyl esterase, a/b hydrolasepSOL1 CDS50765 1494 + 0.352075
CAP0051 OxidoreductasepSOL1 CDS52305 723 - 0.344398
CAP0052 MarR family HTH transcriptional regulatorpSOL1 CDS53038 444 - 0.322072
CAP0053 Xylanase, glycosyl hydrolase family 10pSOL1 CDS53626 957 - 0.343783
CAP0054 Xylanase/chitin deacetylase family enzymepSOL1 CDS54616 750 - 0.314667
CAP0055 Conserved membrane protein, possible homolog of CAAX-like membrane endopeptidasepSOL1 CDS55714 804 + 0.314677
CAP0056 Pectate lyase, secreted, polysaccharide lyase familypSOL1 CDS56818 1137 + 0.352683
CAP0057 Putative glycoportein or S-layer proteinpSOL1 CDS58017 1122 - 0.295009
CAP0058 Rare lipoprotein A RLPA releated proteinpSOL1 CDS59107 621 - 0.352657
CAP0059 Alcohol dehydrogenasepSOL1 CDS60118 1191 - 0.352645
CAP0060 Chloramphenicol O-acetyltransferasepSOL1 CDS61507 663 - 0.312217
CAP0061 Hypothetical proteinpSOL1 CDS62341 276 - 0.264493
CAP0062 Hypothetical protein, CF-18 familypSOL1 CDS62845 474 - 0.297468
CAP0063 NRAMP manganese transport protein MntApSOL1 CDS63631 1296 + 0.33642
CAP0064 Fructose-bisphosphate aldolase class IpSOL1 CDS65300 888 - 0.317568
CAP0065 Predicted secreted metalloproteasepSOL1 CDS66595 2073 + 0.34877
CAP0066 Mannose-specific phosphotransferase system component IIABpSOL1 CDS69541 978 + 0.381391
CAP0067 Mannose/fructose-specific phosphotransferase system component IICpSOL1 CDS70552 807 + 0.386617
CAP0068 Mannose-specific phosphotransferase system component IIDpSOL1 CDS71378 912 + 0.355263
CAP0069 Uncharacterized protein, homolog of Streptococcus salivarius (5669858)pSOL1 CDS72543 408 + 0.323529
CAP0070 HAD phosphatase superfamily proteinpSOL1 CDS73055 852 - 0.325117
CAP0071 Possible xylan degradation enzyme (alpha/beta hydrolase domain and ricin-B-like domain)pSOL1 CDS74067 1371 - 0.366885
CAP0072 Hypothetical proteinpSOL1 CDS76046 177 + 0.338983
CAP0073 ABC ATPase containing transporterpSOL1 CDS76370 2196 + 0.298725
CAP0074 Hypothetical proteinpSOL1 CDS78578 519 + 0.265896
CAP0075 Membrane protein, YKJA_BACSU homologpSOL1 CDS79205 702 - 0.286325
CAP0076 Penicillin binding protein 1A, only N-term. partpSOL1 CDS80094 777 + 0.275418
CAP0077 Uncharacterized Fe-S proteinpSOL1 CDS80971 1032 - 0.350775
CAP0078 Acetyl coenzyme A acetyltransferase (thiolase)pSOL1 CDS82040 1179 - 0.347752
CAP0079 ThlR, HTH transcriptional regulator TetR/AcrR familypSOL1 CDS83321 585 - 0.292308
CAP0080 Site-Specific Recombinase, XerdpSOL1 CDS84265 972 + 0.290123
CAP0081 TnpR resolvase C-terminal fragmentpSOL1 CDS85467 261 + 0.314176
CAP0082 CRP (cyclic AMP receptor protein) regulatory proteinpSOL1 CDS85834 567 - 0.27866
CAP0083 SAM-dependent methyltransferasepSOL1 CDS86595 765 + 0.291503
CAP0084 Hypothetical proteinpSOL1 CDS87686 366 + 0.281421
CAP0085 Hypothetical secreted protein (fragment)pSOL1 CDS88076 204 - 0.254902
CAP0086 Permease, MDR related, probably tetracycline resistance proteinpSOL1 CDS88460 1206 - 0.319237
CAP0087 HTH transcriptional regulator TetR/AcrR familypSOL1 CDS90718 567 + 0.391534
CAP0088 3-oxoacyl-acyl-carrier protein synthasepSOL1 CDS91286 1245 + 0.400803
CAP0089 Predicted membrane proteinpSOL1 CDS93168 648 - 0.33179
CAP0090 ABC-type transporter, ATPase componentpSOL1 CDS93821 849 - 0.349823
CAP0091 Predicted regulator of stationary/sporulation gene expressionpSOL1 CDS94702 231 - 0.372294
CAP0092 Hypothetical proteinpSOL1 CDS94976 222 + 0.234234
CAP0093 TnpA, transposase (3' segment)pSOL1 CDS95156 2022 - 0.307616
CAP0094 TnpA, transposase (5' segment)pSOL1 CDS97187 945 - 0.25291
CAP0096 Inorganic pyrophosphatasepSOL1 CDS99168 333 - 0.282282
CAP0097 Carboxyl esterase, a/b hydrolasepSOL1 CDS99519 900 - 0.391111
CAP0098 Alpha-amylase, AmyApSOL1 CDS100797 1686 - 0.350534
CAP0099 DNA mismatch repair protein, MUTS fragmentpSOL1 CDS102908 1890 - 0.316931
CAP0100 HTH transcriptional regulator TetR/AcrR familypSOL1 CDS105222 576 - 0.317708
CAP0101 Hypothetical proteinpSOL1 CDS105926 240 - 0.3
CAP0102 Membrane proteinpSOL1 CDS106526 3177 + 0.322946
CAP0103 Transcriptional regulator HTH-type, ArsR familypSOL1 CDS109863 408 + 0.27451
CAP0104 Heavy metal resistance membrane proteinpSOL1 CDS110272 1050 + 0.326667
CAP0105 Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzymepSOL1 CDS111324 411 + 0.335766
CAP0106 1-deoxyxylulose-5-phosphate synthase, dehydrogenasepSOL1 CDS111784 1761 - 0.353776
CAP0107 HTH transcriptional regulator MerR familypSOL1 CDS113673 459 + 0.324619
CAP0108 Predicted HTH containing transcriptional regulatorpSOL1 CDS114217 543 + 0.289134
CAP0109 Permease MDR typepSOL1 CDS114920 1638 + 0.318071
CAP0110 NH2-acetyltransferasepSOL1 CDS116756 414 + 0.342995
CAP0111 NH2-acetyltransferasepSOL1 CDS117240 489 + 0.316973
CAP0112 Hypothetical proteinpSOL1 CDS117904 312 - 0.342949
CAP0113 Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-betapSOL1 CDS118611 708 - 0.323446
CAP0114 Possible beta-xylosidase, family 43 of glycosyl hydrolasespSOL1 CDS119550 1596 - 0.348998
CAP0115 Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain)pSOL1 CDS121197 1377 - 0.366013
CAP0116 Xylanase, glycosyl hydrolase family 10pSOL1 CDS122675 957 - 0.344828
CAP0117 Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domainpSOL1 CDS123711 1284 - 0.351246
CAP0118 Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain)pSOL1 CDS125085 1767 - 0.342388
CAP0119 Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain)pSOL1 CDS126868 1761 - 0.349233
CAP0120 Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain)pSOL1 CDS128646 2118 - 0.366383
CAP0121 Leu-rich protein family protein, YaeG (E.coli) homologpSOL1 CDS131085 1632 + 0.26777
CAP0122 dTDP-4-keto-L-rhamnose reductasepSOL1 CDS132777 720 - 0.323611
CAP0123 Hypothetical proteinpSOL1 CDS133702 498 + 0.218875
CAP0124 Permease, MDR related, probably tetracycline resistance proteinpSOL1 CDS134414 1182 - 0.345178
CAP0125 Hypothetical proteinpSOL1 CDS135755 342 - 0.260234
CAP0126 Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839)pSOL1 CDS136089 1230 - 0.285366
CAP0127 HTH transcriptional regulator TetR familypSOL1 CDS137518 648 - 0.29321
CAP0128 Permease, MDR relatedpSOL1 CDS138365 1446 + 0.33195
CAP0129 Glycogen-binding regulatory subunit of S/T protein phosphatase IpSOL1 CDS139943 744 - 0.334677
CAP0130 Hypothetical proteinpSOL1 CDS140963 423 - 0.297872
CAP0131 Permease, MDR relatedpSOL1 CDS141612 1470 + 0.331973
CAP0132 Hypothetical proteinpSOL1 CDS143086 177 + 0.282486
CAP0133 Antibiotic-resistance protein, alpha/beta superfamily hydrolasepSOL1 CDS143316 795 - 0.320755
CAP0134 Hypothetical proteinpSOL1 CDS144202 969 - 0.278638
CAP0135 OxidoreductasepSOL1 CDS145186 1005 - 0.302488
CAP0136 AstB/chuR/nirj-related proteinpSOL1 CDS146197 1173 - 0.309463
CAP0137 Similar to C-ter. fragment of UDP-glucuronosyltransferases, YpfP B.subtilis relatedpSOL1 CDS147373 1119 - 0.319035
CAP0138 Diverged, distantly related to biotin carboxylase N-term. fragment.pSOL1 CDS148507 1341 - 0.278896
CAP0139 Possible D-alanyl carrier protein, acyl carrier protein familypSOL1 CDS149854 237 - 0.232068
CAP0140 Membrane protein, possible transporterpSOL1 CDS150495 1395 + 0.336918
CAP0141 Periplasmic hydrogenase small subunit, dehydrogenasepSOL1 CDS151995 876 + 0.363014
CAP0142 Periplasmic hydrogenase large subunit, dehydrogenasepSOL1 CDS152888 1416 + 0.350282
CAP0143 Hydrogenase maturation protease delta subunit, HyaD-likepSOL1 CDS154300 444 + 0.304054
CAP0144 Possible steroid binding proteinpSOL1 CDS154733 432 + 0.354167
CAP0145 Hypothetical protein, CF-29 familypSOL1 CDS155177 261 + 0.291188
CAP0146 HypF homologpSOL1 CDS155427 1434 + 0.299163
CAP0147 Membrane protein of YDFR familypSOL1 CDS156940 678 - 0.321534
CAP0148 Phospholipase CpSOL1 CDS157821 819 + 0.340659
CAP0149 Xre family DNA-binding domain and TRP-repeats containing proteinpSOL1 CDS158912 1305 - 0.263602
CAP0150 Stage V sporulation protein D, penicillin-binding proteinpSOL1 CDS160566 1806 + 0.350498
CAP0151 Integrin-like repeats domain fused to lysozyme, LYCV glycosyl hydrolasepSOL1 CDS162636 2259 + 0.328021
CAP0152 Hypothetical protein, CF-6 familypSOL1 CDS164923 573 + 0.263525
CAP0153 Predicted transcriptional regulatorpSOL1 CDS165625 348 + 0.298851
CAP0154 Membrane proteinpSOL1 CDS165962 678 + 0.264012
CAP0155 Hypothetical proteinpSOL1 CDS166655 240 - 0.283333
CAP0156 Hypothetical proteinpSOL1 CDS167061 954 + 0.30608
CAP0157 Special sigma factor (sigF/sigE/sigG family)pSOL1 CDS168036 732 - 0.269126
CAP0158 Hypothetical proteinpSOL1 CDS169010 1302 + 0.311828
CAP0159 Hypothetical proteinpSOL1 CDS170386 483 + 0.273292
CAP0160 Secreted protein containing cell-adhesion domainspSOL1 CDS170962 2904 - 0.331956
CAP0161 Secreted TPR repeats containing proteinpSOL1 CDS174190 957 + 0.285266
CAP0162 Aldehyde dehydrogenase (NAD+)pSOL1 CDS175810 2589 + 0.348011
CAP0163 Butyrate-acetoacetate COA-transferase subunit ApSOL1 CDS178459 657 + 0.321157
CAP0164 Butyrate-acetoacetate COA-transferase subunit BpSOL1 CDS179117 666 + 0.355856
CAP0165 Acetoacetate decarboxylasepSOL1 CDS179848 735 - 0.370068
CAP0166 Hypothetical proteinpSOL1 CDS180815 162 + 0.314815
CAP0167 Specialized sigma factor (SigF/SigE family)pSOL1 CDS180992 555 + 0.264865
CAP0168 Alpha-amylasepSOL1 CDS181586 2283 - 0.361367
CAP0169 Hypothetical protein, CF-45 familypSOL1 CDS184396 219 + 0.324201
CAP0170 Hypothetical protein, CF-46 familypSOL1 CDS184635 216 + 0.25
CAP0171 Hypothetical protein, CF-45 familypSOL1 CDS185130 219 + 0.269406
CAP0172 Hypothetical protein, CF-46 familypSOL1 CDS185369 216 + 0.305556
CAP0173 Archaeal-type Fe-S oxidoreductasepSOL1 CDS185845 1143 + 0.246719
CAP0174 Membrane proteinpSOL1 CDS187003 420 + 0.266667
CAP0175 Replication protein, repApSOL1 CDS188765 1011 - 0.313551
CAP0176 Hypothetical proteinpSOL1 CDS190149 300 - 0.293333
CAP0177 SpoOJ regulator, soj/para familypSOL1 CDS190602 750 - 0.266667
CAP0178 Transcriptional regulator, MerR familypSOL1 CDS191582 372 - 0.255376